SRR2934649.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934649.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	588833
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTC	2350	0.3990944800987716	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1982	0.33659798278968744	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCG	1825	0.30993507497032263	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGC	1559	0.2647609763719085	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTT	1059	0.1798472572019571	No Hit
GCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGC	783	0.13297488422014392	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	682	0.11582231294781373	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTAT	20	7.0304796E-4	45.000004	22
CTACGCG	20	7.0304796E-4	45.000004	1
GTCTACG	25	3.88848E-5	45.0	1
CTACGCC	25	3.88848E-5	45.0	24
CGCTACA	25	3.88848E-5	45.0	30
ACTACGC	25	3.88848E-5	45.0	23
ACGGTTC	30	2.1636915E-6	44.999996	11
TATGCGG	70	0.0	41.785713	2
CGGGTAT	60	3.6379788E-12	41.249996	6
TACGAAT	100	0.0	40.5	12
ATATGCG	40	3.4543882E-7	39.375004	1
TTGTACG	35	6.243099E-6	38.571426	1
TACGGGT	35	6.243099E-6	38.571426	4
CGTTTTT	1275	0.0	37.588238	1
GACCGAT	240	0.0	37.499996	9
GTTACGG	60	1.546141E-10	37.499996	2
TACGCCG	30	1.139246E-4	37.499996	25
CATCGAA	30	1.139246E-4	37.499996	15
ACGTATG	30	1.139246E-4	37.499996	1
TACGCGG	55	2.744855E-9	36.81818	2