##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934649.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 588833 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.159231904461876 31.0 31.0 33.0 28.0 34.0 2 31.23167519483453 31.0 31.0 34.0 28.0 34.0 3 31.002844609592195 31.0 31.0 34.0 28.0 34.0 4 34.96718933891273 35.0 35.0 37.0 32.0 37.0 5 35.15818916399047 35.0 35.0 37.0 33.0 37.0 6 35.107229044567816 36.0 35.0 37.0 32.0 37.0 7 30.685511851407785 35.0 35.0 37.0 0.0 37.0 8 32.861656870453935 35.0 35.0 37.0 17.0 37.0 9 36.32929879948984 39.0 35.0 39.0 32.0 39.0 10 36.046062296100935 37.0 35.0 39.0 32.0 39.0 11 36.23246149587404 37.0 35.0 39.0 32.0 39.0 12 36.19025428262343 37.0 35.0 39.0 32.0 39.0 13 36.05954149988197 38.0 35.0 39.0 31.0 39.0 14 36.93842057085795 39.0 36.0 40.0 31.0 41.0 15 37.18858318063016 39.0 36.0 41.0 32.0 41.0 16 37.16943174040857 39.0 35.0 40.0 32.0 41.0 17 37.113156022165875 39.0 35.0 40.0 32.0 41.0 18 37.04706088143837 39.0 35.0 40.0 32.0 41.0 19 36.864652626466246 39.0 35.0 40.0 31.0 41.0 20 36.834044627254244 39.0 35.0 40.0 31.0 41.0 21 36.82198178430897 39.0 35.0 40.0 31.0 41.0 22 36.958733630757784 39.0 35.0 40.0 31.0 41.0 23 37.02441609081013 39.0 35.0 40.0 32.0 41.0 24 36.96738464046682 39.0 35.0 40.0 32.0 41.0 25 36.60979089147517 38.0 35.0 40.0 31.0 41.0 26 36.59040848593744 38.0 35.0 40.0 31.0 41.0 27 36.59111496808093 38.0 35.0 40.0 31.0 41.0 28 36.551467054326096 38.0 35.0 40.0 31.0 41.0 29 36.49798160089533 38.0 35.0 40.0 31.0 41.0 30 36.28440831271345 38.0 35.0 40.0 30.0 41.0 31 36.252487547403085 38.0 35.0 40.0 30.0 41.0 32 36.10246029009923 38.0 35.0 40.0 30.0 41.0 33 35.95275061010507 38.0 35.0 40.0 29.0 41.0 34 35.85569253081943 38.0 35.0 40.0 29.0 41.0 35 35.775571341959434 38.0 35.0 40.0 29.0 41.0 36 35.68615210085033 38.0 34.0 40.0 29.0 41.0 37 35.597471609097994 38.0 34.0 40.0 28.0 41.0 38 35.42760001562412 38.0 34.0 40.0 27.0 41.0 39 35.324400976168114 38.0 34.0 40.0 27.0 41.0 40 35.19205445346983 38.0 34.0 40.0 26.0 41.0 41 34.98697763202809 38.0 34.0 40.0 25.0 41.0 42 35.016469864970205 38.0 34.0 40.0 26.0 41.0 43 34.99221171367773 37.0 34.0 40.0 26.0 41.0 44 34.82558042772739 37.0 34.0 40.0 25.0 41.0 45 34.73166415605104 37.0 34.0 40.0 25.0 41.0 46 34.66996414942777 37.0 34.0 40.0 25.0 41.0 47 34.58551745571325 37.0 33.0 40.0 25.0 41.0 48 34.496485421163555 37.0 33.0 40.0 24.0 41.0 49 34.37561074192513 36.0 33.0 40.0 24.0 41.0 50 34.223433469251894 36.0 33.0 40.0 24.0 41.0 51 32.528433358864056 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 6.0 8 25.0 9 56.0 10 61.0 11 46.0 12 36.0 13 29.0 14 44.0 15 71.0 16 135.0 17 261.0 18 412.0 19 719.0 20 1282.0 21 1908.0 22 2665.0 23 3648.0 24 4770.0 25 6397.0 26 7822.0 27 9110.0 28 10339.0 29 12328.0 30 15112.0 31 18890.0 32 24904.0 33 34132.0 34 51141.0 35 52445.0 36 60322.0 37 85889.0 38 104778.0 39 79047.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.46155701192019 21.0366946146021 25.75942584739646 12.742322526081248 2 33.790565406490465 23.369953789954028 25.53491397391111 17.3045668296444 3 32.424813147360965 23.614505301163486 27.147934983263504 16.812746568212038 4 29.156993578824558 25.06381265995622 26.888948139795154 18.89024562142407 5 26.38405116561062 29.71708447046956 24.877172305220665 19.021692058699156 6 26.47490884512247 34.64004225306666 24.807882710377985 14.077166191432886 7 71.07957604278293 17.633522577708792 8.153585142137075 3.1333162373712073 8 84.26990335120485 4.958112062333463 7.506882256938724 3.2651023295229717 9 78.7496624679663 6.37803927429339 9.111072239497446 5.761226018242863 10 46.79102563884837 23.904400738409702 15.698508745263936 13.606064877477994 11 35.32206924543971 24.401145995553918 22.606069972301146 17.67071478670523 12 30.976015270883256 22.082661807337566 27.544482051787178 19.396840869992 13 27.38008909147415 23.131176411648124 29.913065334313803 19.57566916256392 14 22.28781335285217 25.32313915830125 31.1787892322611 21.210258256585483 15 21.52715625652774 23.71877934830419 34.21360555539516 20.540458839772906 16 26.883004179453255 23.152065186563934 28.948275657104816 21.016654976877994 17 27.01988509475522 23.097720406295164 26.65152938099597 23.23086511795365 18 28.01388509135867 22.292228866249005 28.394808035555073 21.299078006837252 19 27.35325635621645 25.148386724249487 25.611166493725722 21.88719042580834 20 27.629905253272153 26.155123778728434 26.45690713665844 19.758063831340973 21 26.86941798438606 25.301231418755403 28.48702433457364 19.342326262284892 22 26.068172130298407 22.460697685082188 28.85470073857953 22.61642944603988 23 24.615977705053897 24.060302326805733 29.05221004936884 22.271509918771535 24 24.904854177670067 24.070831627982805 28.74414307622025 22.28017111812687 25 24.854245601044777 25.80714735756997 26.238848705830005 23.099758335555244 26 23.25735819833467 25.412977873183056 26.49834503161338 24.831318896868893 27 23.63471476632594 24.340177945189893 28.256908155623073 23.7681991328611 28 21.73995003676764 25.10932641343131 28.41943301411436 24.73129053568669 29 23.99305066122313 24.497438153092645 28.002336825551556 23.50717436013267 30 25.386145137925354 24.37872877369305 27.916234314313225 22.31889177406837 31 26.518724324214165 23.878417140343696 26.886400728220057 22.71645780722208 32 27.64620868735278 24.070322145667784 26.16870997379563 22.114759193183804 33 26.794354256639828 23.826789599088364 27.018356647810158 22.360499496461646 34 23.567972583058356 24.217053052393464 29.533501009624118 22.681473354924062 35 23.22373236554337 26.715044842935093 27.449039031440154 22.61218376008138 36 25.857416279318585 26.72098880327699 25.09998590432262 22.321609013081808 37 24.095456606542093 27.099873818213315 26.727781900810587 22.076887674434005 38 23.937007606570962 26.899647268410572 26.187560819451356 22.975784305567114 39 24.37923825600807 24.926422262339237 27.190391842848484 23.503947638804213 40 25.8647188591672 23.71504314466071 27.406921826731857 23.01331616944023 41 22.12291091022412 25.124950537758583 27.23284870243346 25.51928984958384 42 22.8633585413861 24.002900652646847 27.780372363641305 25.353368442325753 43 22.68554921344422 23.806749961364257 28.5289717118436 24.978729113347928 44 23.416146853182482 23.968255855225507 27.888382614425485 24.727214677166533 45 22.214278072050988 24.442583890508853 27.182749608123185 26.16038842931697 46 23.509382116831087 25.110515205499688 27.0546997196149 24.32540295805432 47 21.804484463336806 25.528120876377514 29.405111466239152 23.262283194046528 48 22.358971049516583 25.438112334057365 28.06873935394246 24.13417726248359 49 23.20929703328448 24.350367591490286 28.914819651751856 23.52551572347338 50 21.628373409778323 25.275927130442753 28.42248990800448 24.67320955177444 51 22.133440211401194 24.874285238768888 27.38365546767929 25.608619082150625 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 183.0 1 502.5 2 822.0 3 2469.0 4 4116.0 5 2907.0 6 1698.0 7 1561.5 8 1425.0 9 1396.0 10 1367.0 11 1373.5 12 1380.0 13 1354.5 14 1329.0 15 1458.0 16 1587.0 17 1531.0 18 1475.0 19 1478.0 20 1481.0 21 1625.0 22 1769.0 23 2033.0 24 2297.0 25 2744.5 26 4004.0 27 4816.0 28 5181.0 29 5546.0 30 6623.5 31 7701.0 32 9169.5 33 10638.0 34 12673.5 35 14709.0 36 15820.0 37 16931.0 38 18246.5 39 19562.0 40 21853.5 41 24145.0 42 26768.0 43 29391.0 44 30982.5 45 32574.0 46 39092.0 47 45610.0 48 43631.0 49 41652.0 50 42485.0 51 43318.0 52 40992.0 53 38666.0 54 37906.0 55 37146.0 56 36688.0 57 36230.0 58 35186.5 59 34143.0 60 31911.5 61 29680.0 62 27581.5 63 25483.0 64 22909.0 65 20335.0 66 17691.5 67 15048.0 68 13021.0 69 10994.0 70 9336.0 71 7678.0 72 6475.0 73 5272.0 74 4292.5 75 2614.5 76 1916.0 77 1533.5 78 1151.0 79 820.0 80 489.0 81 366.5 82 244.0 83 195.5 84 147.0 85 114.5 86 82.0 87 63.5 88 45.0 89 41.0 90 37.0 91 25.5 92 14.0 93 8.0 94 2.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 588833.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.005903195559014 #Duplication Level Percentage of deduplicated Percentage of total 1 72.41012895714654 23.175515777803763 2 8.384892870391793 5.367321390297854 3 3.922933888461673 3.766711268300466 4 2.371954285663228 3.0366615700491444 5 1.6632634633198438 2.6617124697862575 6 1.1989736307751335 2.302454037637011 7 0.9358742655121874 2.0967450801638576 8 0.7605664345332203 1.9474092541969377 9 0.6112428980500291 1.7607042921565959 >10 7.652836607833792 49.78732694499566 >50 0.06681477521506536 1.325344531352256 >100 0.016309118359572883 0.9515337246433399 >500 0.0015783017767328595 0.3429966726417419 >1k 0.0026305029612214326 1.4775629859751032 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTC 2350 0.3990944800987716 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1982 0.33659798278968744 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCG 1825 0.30993507497032263 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGC 1559 0.2647609763719085 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTT 1059 0.1798472572019571 No Hit GCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGC 783 0.13297488422014392 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 682 0.11582231294781373 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05026892174861124 0.0 2 0.0 0.0 0.0 0.3077273182719039 0.0 3 0.0 0.0 0.0 0.4254177330414566 0.0 4 0.0 0.0 0.0 0.6349847919528967 0.0 5 0.0 0.0 0.0 1.3953022334006415 0.0 6 0.0 0.0 0.0 1.8692906138073104 0.0 7 0.0 0.0 0.0 2.160035188245224 0.0 8 0.0 0.0 0.0 2.6031149748740305 0.0 9 0.0 0.0 0.0 2.790774294239623 0.0 10 0.0 0.0 0.0 3.5065969468423135 0.0 11 0.0 0.0 0.0 4.03611889958613 0.0 12 0.0 0.0 0.0 4.724769162054437 0.0 13 0.0 0.0 0.0 4.947582761156389 0.0 14 0.0 0.0 0.0 5.076481786856375 0.0 15 0.0 0.0 0.0 5.2286471716089284 0.0 16 0.0 0.0 0.0 5.476595231585186 0.0 17 0.0 0.0 0.0 5.756301022531006 0.0 18 0.0 0.0 0.0 6.097314518717531 0.0 19 0.0 0.0 0.0 6.308070369697351 0.0 20 0.0 0.0 0.0 6.513391742650293 0.0 21 0.0 0.0 0.0 6.765925143461729 0.0 22 0.0 0.0 0.0 7.041724903325731 0.0 23 0.0 0.0 0.0 7.28848417123361 0.0 24 0.0 0.0 0.0 7.501787433788527 0.0 25 0.0 0.0 0.0 7.698787262262814 0.0 26 0.0 0.0 0.0 7.886616409066748 0.0 27 0.0 0.0 0.0 8.136942053179764 0.0 28 0.0 0.0 0.0 8.332922917024012 0.0 29 0.0 0.0 0.0 8.579172702616871 0.0 30 0.0 0.0 0.0 8.900486215955967 0.0 31 0.0 0.0 0.0 9.137904974755152 0.0 32 0.0 0.0 0.0 9.358680644597024 0.0 33 0.0 0.0 0.0 9.592872682067751 0.0 34 0.0 0.0 0.0 9.84048108716733 0.0 35 0.0 0.0 0.0 10.113054125702874 0.0 36 0.0 0.0 0.0 10.357605636912334 0.0 37 0.0 0.0 0.0 10.619309719394124 0.0 38 0.0 0.0 0.0 10.971701653949422 0.0 39 0.0 0.0 0.0 11.56983389178256 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAT 20 7.0304796E-4 45.000004 22 CTACGCG 20 7.0304796E-4 45.000004 1 GTCTACG 25 3.88848E-5 45.0 1 CTACGCC 25 3.88848E-5 45.0 24 CGCTACA 25 3.88848E-5 45.0 30 ACTACGC 25 3.88848E-5 45.0 23 ACGGTTC 30 2.1636915E-6 44.999996 11 TATGCGG 70 0.0 41.785713 2 CGGGTAT 60 3.6379788E-12 41.249996 6 TACGAAT 100 0.0 40.5 12 ATATGCG 40 3.4543882E-7 39.375004 1 TTGTACG 35 6.243099E-6 38.571426 1 TACGGGT 35 6.243099E-6 38.571426 4 CGTTTTT 1275 0.0 37.588238 1 GACCGAT 240 0.0 37.499996 9 GTTACGG 60 1.546141E-10 37.499996 2 TACGCCG 30 1.139246E-4 37.499996 25 CATCGAA 30 1.139246E-4 37.499996 15 ACGTATG 30 1.139246E-4 37.499996 1 TACGCGG 55 2.744855E-9 36.81818 2 >>END_MODULE