SRR2934648.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934648.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1264430
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19744	1.561494111971402	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTC	3622	0.28645318443883805	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTT	1966	0.15548508023378121	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCG	1781	0.14085398163599408	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGC	1573	0.12440388159091448	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1508	0.11926322532682711	No Hit
GCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	1386	0.10961460895423235	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTC	1311	0.10368308249566999	No Hit
GAACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCT	1269	0.10036142767887507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCGAC	20	7.033554E-4	45.000004	1
CGTTTTT	12595	0.0	44.017467	1
CGTTTTA	775	0.0	41.806454	1
GCGGGCC	100	0.0	40.5	5
CTATCGG	45	1.9284926E-8	40.0	2
TTTCGCG	45	1.9284926E-8	40.0	1
GCTATCG	45	1.9284926E-8	40.0	1
CGAATGG	170	0.0	39.705883	2
TAGCGCG	80	0.0	39.375004	1
CATAGCG	35	6.248787E-6	38.571426	1
CGCACGG	135	0.0	38.333332	2
TCGTGCG	65	9.094947E-12	38.07692	1
CGTGCGG	185	0.0	37.702705	2
GACACGA	390	0.0	37.5	25
GCTACGA	90	0.0	37.5	10
GTTTTTT	15130	0.0	36.99934	2
CGTTTCT	350	0.0	36.642857	1
ACACGAC	405	0.0	36.11111	26
TCGTTAC	25	0.002107188	36.0	13
GTCGAGA	25	0.002107188	36.0	1