SRR2934647.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934647.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	462877
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4130	0.8922456721764097	No Hit
GAATCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTC	1753	0.3787183204177352	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCG	1693	0.3657559135580295	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGC	1579	0.3411273405245886	No Hit
GCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC	989	0.2136636730708158	No Hit
TCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC	561	0.12119850413824838	No Hit
GAATGCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTT	555	0.11990226345227782	No Hit
CCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC	531	0.11471730070839554	No Hit
CTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGCT	511	0.11039649842182696	No Hit
GAACTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCT	480	0.10369925487764568	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATGCG	35	1.209828E-7	45.0	1
GTCGATC	20	7.028916E-4	45.0	33
GCGCGAC	20	7.028916E-4	45.0	9
TTTCGCG	20	7.028916E-4	45.0	1
GGCGTCC	20	7.028916E-4	45.0	8
GCTATCG	25	3.8871833E-5	45.0	1
GCGTTAG	20	7.028916E-4	45.0	1
GCACCGG	25	3.8871833E-5	45.0	2
TACGCGG	25	3.8871833E-5	45.0	2
GAGACCG	20	7.028916E-4	45.0	10
ACGGCAA	20	7.028916E-4	45.0	5
AGACCGT	20	7.028916E-4	45.0	20
AGCGCCC	25	3.8871833E-5	45.0	13
CCGACGG	20	7.028916E-4	45.0	2
CCGACGA	25	3.8871833E-5	45.0	12
CGTAAGT	20	7.028916E-4	45.0	13
GACGACA	20	7.028916E-4	45.0	14
CGGTACT	20	7.028916E-4	45.0	31
ACCCCGC	20	7.028916E-4	45.0	12
TGTAACG	20	7.028916E-4	45.0	1