##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934647.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 462877 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.95413252332693 31.0 30.0 33.0 28.0 34.0 2 31.023276161917746 31.0 31.0 34.0 28.0 34.0 3 30.65474197248945 31.0 30.0 34.0 27.0 34.0 4 34.62824681286821 35.0 35.0 37.0 32.0 37.0 5 34.982626054005706 35.0 35.0 37.0 32.0 37.0 6 35.01019277259402 35.0 35.0 37.0 32.0 37.0 7 31.09033501340529 35.0 35.0 37.0 0.0 37.0 8 33.128431527165965 35.0 35.0 37.0 17.0 37.0 9 36.38281876178769 39.0 35.0 39.0 32.0 39.0 10 35.779667168599865 37.0 35.0 39.0 31.0 39.0 11 36.17311294361137 37.0 35.0 39.0 32.0 39.0 12 36.35427770228376 38.0 35.0 39.0 32.0 39.0 13 36.34537036837 38.0 35.0 39.0 32.0 39.0 14 37.40158184571711 39.0 36.0 40.0 32.0 41.0 15 37.59060830414992 39.0 36.0 41.0 32.0 41.0 16 37.521691507679144 39.0 36.0 40.0 32.0 41.0 17 37.43147963713903 39.0 36.0 40.0 32.0 41.0 18 37.28214406851064 39.0 36.0 40.0 32.0 41.0 19 36.96889670474014 38.0 36.0 40.0 32.0 41.0 20 36.87155767082832 38.0 35.0 40.0 32.0 41.0 21 36.8770969393597 38.0 35.0 40.0 32.0 41.0 22 36.95848141082836 39.0 35.0 40.0 32.0 41.0 23 37.030407646091724 39.0 35.0 40.0 32.0 41.0 24 36.96020325053956 39.0 35.0 40.0 32.0 41.0 25 36.65443303512596 38.0 35.0 40.0 31.0 41.0 26 36.67592470569935 38.0 35.0 40.0 31.0 41.0 27 36.738988975472964 38.0 35.0 40.0 31.0 41.0 28 36.71924506942449 38.0 35.0 40.0 31.0 41.0 29 36.664980113507475 38.0 35.0 40.0 31.0 41.0 30 36.41762714500828 38.0 35.0 40.0 30.0 41.0 31 36.32879577079872 38.0 35.0 40.0 30.0 41.0 32 36.053461286691714 38.0 35.0 40.0 30.0 41.0 33 35.74118394303454 38.0 35.0 40.0 28.0 41.0 34 35.526813818789876 38.0 35.0 40.0 26.0 41.0 35 35.33846572631606 38.0 35.0 40.0 25.0 41.0 36 35.20485787801079 38.0 35.0 40.0 24.0 41.0 37 35.13108449976992 38.0 35.0 40.0 24.0 41.0 38 34.998574135245434 38.0 34.0 40.0 23.0 41.0 39 34.99816149862706 38.0 34.0 40.0 23.0 41.0 40 34.92151694726677 38.0 34.0 40.0 23.0 41.0 41 34.79249563058869 38.0 34.0 40.0 23.0 41.0 42 34.80250260868438 38.0 34.0 40.0 23.0 41.0 43 34.75777150301268 38.0 34.0 40.0 23.0 41.0 44 34.59391587830028 38.0 34.0 40.0 22.0 41.0 45 34.51783519163838 38.0 34.0 40.0 22.0 41.0 46 34.39628238171264 38.0 34.0 40.0 21.0 41.0 47 34.36028577786323 38.0 33.0 40.0 21.0 41.0 48 34.27027914543172 38.0 33.0 40.0 20.0 41.0 49 34.149975047366794 38.0 33.0 40.0 20.0 41.0 50 33.991062420470236 38.0 33.0 40.0 20.0 41.0 51 32.29753692665654 36.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 17.0 10 29.0 11 16.0 12 11.0 13 10.0 14 13.0 15 18.0 16 60.0 17 112.0 18 260.0 19 562.0 20 927.0 21 1429.0 22 2259.0 23 3258.0 24 5088.0 25 7502.0 26 9244.0 27 9394.0 28 9199.0 29 9200.0 30 10795.0 31 13213.0 32 17162.0 33 23065.0 34 33938.0 35 39158.0 36 46668.0 37 67984.0 38 88893.0 39 63388.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.47184241169901 21.775115203390964 26.913197242463983 15.839845142446048 2 37.014800908232644 23.432142880290012 24.144643177345166 15.40841303413218 3 28.26431211747397 22.418914744089683 33.11182020277525 16.204952935661094 4 25.629270843010133 23.90289428941166 32.662240724857796 17.80559414272042 5 23.85839002586 27.429749155823252 31.61768677207984 17.094174046236905 6 22.712945339690673 33.12845529157854 30.762383959453594 13.396215409277195 7 66.18172862337079 16.43136297547729 14.037206428489643 3.349701972662284 8 78.38972340384163 4.419964699045319 13.351279065496882 3.8390328316161746 9 73.73146645869205 5.3781026060918995 14.979789447304576 5.910641487911476 10 36.22927905253447 22.547890692343756 26.004964601827268 15.217865653294504 11 26.838015282677684 26.24131248690257 29.191988368400246 17.7286838620195 12 22.847538330917285 22.88253682943849 35.630631895730396 18.639292943913826 13 20.708309118837185 26.419977661452176 36.953661555877694 15.91805166383294 14 18.88881927596316 28.89817381291358 34.86390552997881 17.349101381144454 15 17.876671340334475 27.148032846738985 38.86885716939921 16.10643864352733 16 20.146388781468943 25.46291995497724 34.98337571320243 19.407315550351388 17 20.354651451681548 25.70358864233911 32.681684335147345 21.260075570831994 18 21.918133759076387 25.016581078774706 34.30544183443982 18.75984332770909 19 20.614763749332976 28.047623882802558 32.43561464492727 18.901997722937196 20 21.008388837639373 26.790702497639764 34.51780926682466 17.6830993978962 21 20.10987800214744 27.47706194086118 34.88140477923941 17.531655277751973 22 18.80283531046045 24.918930947098257 34.25445636745831 22.023777374982988 23 17.771891884885186 26.96439874955982 33.726886408268285 21.53682295728671 24 19.263216794094326 25.795189650814365 34.36809346759506 20.573500087496246 25 17.5554196903281 28.405170272016107 32.922785102737876 21.116624934917915 26 17.249290848324716 29.424663571531962 33.54174003028882 19.784305549854498 27 18.801971150003133 28.42547804276298 32.732885842243185 20.0396649649907 28 17.680938996752918 26.63839421703822 35.169602291753534 20.51106449445533 29 18.152770606446207 26.49429546078116 34.08961776022572 21.26331617254692 30 18.639725024142486 27.788591785722772 32.45203369361623 21.119649496518512 31 19.9119852574226 27.7257241124532 30.225956355576105 22.136334274548098 32 18.888387195734506 29.1103252051841 30.023526768450363 21.977760830631034 33 19.168807264132802 28.129071005904375 30.12765810355667 22.574463626406153 34 18.49411398708512 28.742192850368458 29.87532325002106 22.88836991252536 35 16.9109720292864 30.16848968516474 29.27646005310266 23.6440782324462 36 19.193867917394904 28.93576479280673 30.24021500312178 21.63015228667659 37 18.44766536250451 28.56460787639049 31.05317395333966 21.934552807765346 38 18.80067490931716 29.664252058322187 28.55726251250332 22.97781051985733 39 19.514903527286947 27.12102783244793 30.453014515735283 22.91105412452984 40 19.13488896618324 28.703089589675013 29.831251066698066 22.330770377443685 41 17.765410681455332 28.09860934978407 29.978590424670053 24.157389544090545 42 19.353305521769283 27.612735132659434 30.902810033767068 22.131149311804215 43 19.956273480859927 26.56688493919551 30.705349369270884 22.771492210673678 44 19.332133590565096 27.30271756859814 28.817158770040418 24.547990070796345 45 19.130784204011 27.755753688344853 27.909790289861018 25.203671817783125 46 20.81352065451513 28.511462008265692 28.229745699181425 22.44527163803775 47 17.49600865888778 27.928801819921922 31.126843632325652 23.448345888864644 48 18.803915511032088 26.71249597625287 30.674023552693264 23.809564960021774 49 19.514255406943963 24.26994644365566 32.57366427798314 23.642133871417244 50 18.85706137915688 25.197406654467603 31.138725838613713 24.806806127761803 51 18.211965597772195 25.712446287026573 28.453563257625675 27.622024857575557 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 110.0 1 256.5 2 403.0 3 4227.0 4 8051.0 5 5999.5 6 3948.0 7 3789.5 8 3631.0 9 3610.0 10 3589.0 11 3517.5 12 3446.0 13 3380.0 14 3314.0 15 3163.5 16 3013.0 17 2918.5 18 2824.0 19 2751.5 20 2679.0 21 2656.5 22 2634.0 23 2873.0 24 3112.0 25 3374.5 26 3876.0 27 4115.0 28 5049.0 29 5983.0 30 7009.0 31 8035.0 32 9237.5 33 10440.0 34 12320.5 35 14201.0 36 15925.0 37 17649.0 38 18948.5 39 20248.0 40 23006.5 41 25765.0 42 28370.5 43 30976.0 44 34580.0 45 38184.0 46 45156.0 47 52128.0 48 50652.0 49 49176.0 50 46806.5 51 44437.0 52 38292.0 53 32147.0 54 26959.0 55 21771.0 56 18109.5 57 14448.0 58 12619.5 59 10791.0 60 9000.0 61 7209.0 62 6076.5 63 4944.0 64 3892.0 65 2840.0 66 2074.5 67 1309.0 68 1015.5 69 722.0 70 567.0 71 412.0 72 347.0 73 282.0 74 205.5 75 88.5 76 48.0 77 49.5 78 51.0 79 33.5 80 16.0 81 13.5 82 11.0 83 10.0 84 9.0 85 6.5 86 4.0 87 3.0 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 462877.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.278446245893754 #Duplication Level Percentage of deduplicated Percentage of total 1 77.94423783509724 36.071382208287055 2 9.630536905251825 8.91372568977585 3 3.5264095673079967 4.8959026680500575 4 1.909525278700655 3.534794518620942 5 1.2039683692530143 2.7858892729115996 6 0.8091459828319582 2.246761132294179 7 0.6378743026579597 2.0663882139035343 8 0.5460348346063537 2.02157149933725 9 0.4231256191801212 1.7623436600238975 >10 3.261084970616458 28.80564635368696 >50 0.08404381571958529 2.5759909355013946 >100 0.01985650591165903 1.6906142600515293 >500 0.002308896036239422 0.6725272502063157 >1k 0.0018471168289915375 1.9564623373494818 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4130 0.8922456721764097 No Hit GAATCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTC 1753 0.3787183204177352 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCG 1693 0.3657559135580295 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGC 1579 0.3411273405245886 No Hit GCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 989 0.2136636730708158 No Hit TCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 561 0.12119850413824838 No Hit GAATGCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTT 555 0.11990226345227782 No Hit CCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 531 0.11471730070839554 No Hit CTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGCT 511 0.11039649842182696 No Hit GAACTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCT 480 0.10369925487764568 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.160401143284285E-4 0.0 0.0 0.1272476273394444 0.0 2 2.160401143284285E-4 0.0 0.0 0.7263268643721766 0.0 3 2.160401143284285E-4 0.0 0.0 1.0248943023740649 0.0 4 2.160401143284285E-4 0.0 0.0 1.5948081239724592 0.0 5 2.160401143284285E-4 0.0 0.0 3.071010225178611 0.0 6 2.160401143284285E-4 0.0 0.0 3.907517547858286 0.0 7 2.160401143284285E-4 0.0 0.0 4.610296039768664 0.0 8 2.160401143284285E-4 0.0 0.0 5.773023935084266 0.0 9 2.160401143284285E-4 0.0 0.0 6.113935235494527 0.0 10 2.160401143284285E-4 0.0 0.0 7.528565904117077 0.0 11 2.160401143284285E-4 0.0 0.0 9.150163002266261 0.0 12 2.160401143284285E-4 0.0 0.0 10.635222748159878 0.0 13 2.160401143284285E-4 0.0 0.0 11.19735912564245 0.0 14 2.160401143284285E-4 0.0 0.0 11.427225807287897 0.0 15 2.160401143284285E-4 0.0 0.0 11.81869049445101 0.0 16 2.160401143284285E-4 0.0 0.0 12.619551198266494 0.0 17 2.160401143284285E-4 0.0 0.0 13.698671569336994 0.0 18 2.160401143284285E-4 0.0 0.0 14.890996960315592 0.0 19 2.160401143284285E-4 0.0 0.0 15.591615051082686 0.0 20 2.160401143284285E-4 0.0 0.0 16.257018603214245 0.0 21 2.160401143284285E-4 0.0 0.0 17.081211639377198 0.0 22 2.160401143284285E-4 0.0 0.0 17.993549042186153 0.0 23 2.160401143284285E-4 0.0 0.0 18.910423287396004 0.0 24 2.160401143284285E-4 0.0 0.0 19.59807897130339 0.0 25 2.160401143284285E-4 0.0 0.0 20.26521084434958 0.0 26 2.160401143284285E-4 0.0 0.0 20.86169760001037 0.0 27 2.160401143284285E-4 0.0 0.0 21.482596888590272 0.0 28 2.160401143284285E-4 0.0 0.0 22.098095174311965 0.0 29 2.160401143284285E-4 0.0 0.0 22.723531305292767 0.0 30 2.160401143284285E-4 0.0 0.0 23.389150897538656 0.0 31 2.160401143284285E-4 0.0 0.0 24.09192938944903 0.0 32 2.160401143284285E-4 0.0 0.0 24.752796099179697 0.0 33 2.160401143284285E-4 0.0 0.0 25.382769072561395 0.0 34 2.160401143284285E-4 0.0 0.0 25.982064349708455 0.0 35 4.32080228656857E-4 0.0 0.0 26.604475919088657 0.0 36 4.32080228656857E-4 0.0 0.0 27.21586944263811 0.0 37 4.32080228656857E-4 0.0 0.0 27.863773745509064 0.0 38 4.32080228656857E-4 0.0 0.0 28.518375291924205 0.0 39 4.32080228656857E-4 0.0 0.0 29.183346763827107 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 35 1.209828E-7 45.0 1 GTCGATC 20 7.028916E-4 45.0 33 GCGCGAC 20 7.028916E-4 45.0 9 TTTCGCG 20 7.028916E-4 45.0 1 GGCGTCC 20 7.028916E-4 45.0 8 GCTATCG 25 3.8871833E-5 45.0 1 GCGTTAG 20 7.028916E-4 45.0 1 GCACCGG 25 3.8871833E-5 45.0 2 TACGCGG 25 3.8871833E-5 45.0 2 GAGACCG 20 7.028916E-4 45.0 10 ACGGCAA 20 7.028916E-4 45.0 5 AGACCGT 20 7.028916E-4 45.0 20 AGCGCCC 25 3.8871833E-5 45.0 13 CCGACGG 20 7.028916E-4 45.0 2 CCGACGA 25 3.8871833E-5 45.0 12 CGTAAGT 20 7.028916E-4 45.0 13 GACGACA 20 7.028916E-4 45.0 14 CGGTACT 20 7.028916E-4 45.0 31 ACCCCGC 20 7.028916E-4 45.0 12 TGTAACG 20 7.028916E-4 45.0 1 >>END_MODULE