SRR2934646.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934646.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	761999
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGC	12688	1.6650940486798538	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCG	12158	1.5955401516274954	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTC	8962	1.1761170290249725	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4197	0.550788124393864	No Hit
GCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGC	2671	0.35052539439028135	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCT	2018	0.26482974387105496	No Hit
GAACTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCT	1638	0.21496091202219425	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTC	1594	0.20918662622916828	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCATTCGTCGTA	1378	0.18084013233613166	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCG	1115	0.14632565134599915	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGC	1091	0.14317604091343952	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATCG	20	7.0317875E-4	45.0	27
CACGGAT	20	7.0317875E-4	45.0	16
AACGGTC	20	7.0317875E-4	45.0	31
GTTACGG	55	1.8189894E-12	45.0	2
CTAGTCG	20	7.0317875E-4	45.0	1
TCGTATC	20	7.0317875E-4	45.0	26
CGGCTAA	25	3.889564E-5	45.0	28
ACGTATA	20	7.0317875E-4	45.0	10
CACACGA	25	3.889564E-5	45.0	27
CGCGTAG	25	3.889564E-5	45.0	2
TTTTACG	25	3.889564E-5	45.0	1
TACGGCT	1470	0.0	42.2449	7
CGTTTTT	2730	0.0	42.032967	1
TGATACC	1355	0.0	41.18081	4
ACGGCTG	1635	0.0	40.871563	8
GATACCT	1385	0.0	40.451263	5
CGATGAA	410	0.0	39.512196	19
ATACGGC	3020	0.0	39.41225	6
CGACGAA	40	3.4561708E-7	39.375	19
ACGATAG	40	3.4561708E-7	39.375	1