##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934644.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 663497 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.126553699564578 31.0 31.0 33.0 28.0 34.0 2 31.16739035745452 31.0 31.0 34.0 28.0 34.0 3 30.962234946050998 31.0 31.0 34.0 28.0 34.0 4 34.95280762384758 35.0 35.0 37.0 32.0 37.0 5 35.169260750237 35.0 35.0 37.0 33.0 37.0 6 35.13738117881467 36.0 35.0 37.0 32.0 37.0 7 31.123198748449504 35.0 35.0 37.0 0.0 37.0 8 33.080416339486085 35.0 35.0 37.0 17.0 37.0 9 36.36546208950455 39.0 35.0 39.0 32.0 39.0 10 36.04612228842029 37.0 35.0 39.0 32.0 39.0 11 36.28187165880178 37.0 35.0 39.0 32.0 39.0 12 36.384800534139565 38.0 35.0 39.0 32.0 39.0 13 36.325706069507476 38.0 35.0 39.0 32.0 39.0 14 37.44209393561689 39.0 36.0 40.0 32.0 41.0 15 37.57990314952441 39.0 36.0 41.0 32.0 41.0 16 37.54655861292515 39.0 36.0 40.0 33.0 41.0 17 37.40876145634419 39.0 36.0 40.0 32.0 41.0 18 37.34425475925287 39.0 36.0 40.0 32.0 41.0 19 37.15743402004832 39.0 36.0 40.0 32.0 41.0 20 37.12660192887082 39.0 35.0 40.0 32.0 41.0 21 37.18133314845433 39.0 35.0 40.0 32.0 41.0 22 37.25396799081232 39.0 35.0 40.0 32.0 41.0 23 37.31169997754323 39.0 35.0 40.0 32.0 41.0 24 37.215122298970456 39.0 35.0 41.0 32.0 41.0 25 36.92020611999753 39.0 35.0 40.0 31.0 41.0 26 36.879747760728385 39.0 35.0 40.0 31.0 41.0 27 36.93890552632491 39.0 35.0 40.0 31.0 41.0 28 36.94453328349638 39.0 35.0 40.0 31.0 41.0 29 36.94132452746584 39.0 35.0 40.0 31.0 41.0 30 36.727955062343916 39.0 35.0 40.0 31.0 41.0 31 36.75428675638322 39.0 35.0 40.0 31.0 41.0 32 36.61164255452549 39.0 35.0 40.0 30.0 41.0 33 36.472898897809635 39.0 35.0 40.0 30.0 41.0 34 36.418821788191956 39.0 35.0 40.0 30.0 41.0 35 36.365466611002006 39.0 35.0 40.0 30.0 41.0 36 36.31987183061867 39.0 35.0 40.0 30.0 41.0 37 36.23033110925897 39.0 35.0 40.0 30.0 41.0 38 36.1786262786418 39.0 35.0 40.0 30.0 41.0 39 36.07518798125689 38.0 35.0 40.0 30.0 41.0 40 35.95346173381341 38.0 35.0 40.0 29.0 41.0 41 35.792978717311456 38.0 35.0 40.0 28.0 41.0 42 35.85185012140221 38.0 35.0 40.0 29.0 41.0 43 35.845972174704634 38.0 35.0 40.0 29.0 41.0 44 35.690278931178284 38.0 35.0 40.0 28.0 41.0 45 35.62052277553629 38.0 35.0 40.0 28.0 41.0 46 35.493197407071925 38.0 34.0 40.0 28.0 41.0 47 35.43299216123057 38.0 34.0 40.0 28.0 41.0 48 35.394924166951775 38.0 34.0 40.0 27.0 41.0 49 35.28869007697096 38.0 34.0 40.0 27.0 41.0 50 35.13797801647935 38.0 34.0 40.0 27.0 41.0 51 33.45386188633859 36.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 23.0 9 57.0 10 80.0 11 51.0 12 33.0 13 25.0 14 25.0 15 42.0 16 101.0 17 183.0 18 315.0 19 625.0 20 1022.0 21 1608.0 22 2194.0 23 3053.0 24 4317.0 25 5750.0 26 7285.0 27 8400.0 28 9803.0 29 11748.0 30 14924.0 31 18727.0 32 24281.0 33 33872.0 34 51172.0 35 56755.0 36 66931.0 37 100182.0 38 133538.0 39 106365.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.935692248796904 20.71765207679914 24.111638786610943 11.235016887793012 2 31.712426732901584 26.49281006545621 24.802222165284846 16.992541036357363 3 32.74106740497697 25.59499138654734 26.705772595806764 14.958168612668935 4 29.07805159631468 24.91510888519466 27.57691443970357 18.429925078787093 5 26.85226911350014 30.140603499337598 23.941781198709265 19.065346188453 6 25.825437040408623 37.41900867675362 23.548561636299787 13.206992646537966 7 69.82443025364094 17.63203149373697 9.182859907429876 3.360678345192216 8 80.96751002642063 7.8687620290672005 7.674337638301304 3.4893903062108795 9 75.32920269420961 8.22731677761919 9.042994919344022 7.400485608827169 10 41.29212340070867 28.38490603574696 16.377617381841965 13.945353181702405 11 32.3421206124519 26.719638521349758 23.228590332737 17.709650533461343 12 29.73502517720502 23.4050794502462 27.566213562382348 19.293681810166436 13 25.200867524645933 25.827245639392494 29.580842113830208 19.391044722131372 14 21.437474472378927 29.845801864966987 26.567716206704777 22.14900745594931 15 20.707855498969852 27.62544517910405 32.44430645504049 19.222392866885606 16 23.2781760882114 26.029507292421822 29.239469055624966 21.452847563741813 17 23.148107677954837 26.183991788960615 28.56742381653572 22.10047671654883 18 23.267023061144208 26.97495241123924 28.493723407943065 21.264301119673487 19 25.463415810470885 27.894474277954533 25.36228498395622 21.279824927618364 20 26.67864361104873 27.3021581107375 27.89854362566824 18.12065465254553 21 25.314809260629662 28.43208032590954 26.907129949344156 19.345980464116643 22 24.340275841488356 25.846085212141123 26.742698158394084 23.070940787976436 23 23.47742340960095 28.534115451916136 27.161238106577724 20.82722303190519 24 23.04441466954636 26.4337291653165 28.201031805720294 22.320824359416847 25 22.109218278304198 30.230279865621096 25.923553535283506 21.736948320791203 26 22.043355131974977 28.777974881574448 26.91330932920571 22.26536065724487 27 23.328063276849782 29.093273971095574 26.27291457233416 21.30574817972048 28 20.845459738325868 28.582194041570645 28.734116356215626 21.838229863887854 29 22.29625755655263 26.85498201197594 27.135164137893614 23.713596293577815 30 22.644714294111353 28.734267072797614 27.039609824912546 21.581408808178484 31 23.695811736903106 27.766214466681838 25.075169895267045 23.462803901148007 32 24.09249778069833 28.98460731548146 25.770124054818634 21.152770849001577 33 23.77629439168527 28.880763590490986 24.65482134809954 22.688120669724203 34 22.22391359719788 29.17797669017343 26.189116152748245 22.408993559880454 35 22.29128390934699 28.466594423185033 25.713454619990745 23.52866704747723 36 22.293092508330858 30.06825953998285 23.95986718854795 23.67878076313834 37 22.059481806247806 30.997427267945447 26.683617258254372 20.259473667552378 38 22.662348134204073 28.429216710851748 25.20569045526958 23.702744699674604 39 23.31058015333905 28.124919931815818 26.805094823337562 21.75940509150757 40 24.508626263570143 27.98430136082002 27.070205291056325 20.43686708455351 41 19.981100140618572 30.003602126309538 26.37977262896441 23.63552510410748 42 21.24289936503104 28.895684532107907 26.85483129539395 23.006584807467103 43 22.62949191933046 27.98098559601626 25.710591004932954 23.67893147972033 44 22.620448924411114 26.877137349528336 26.66899774980143 23.833415976259122 45 21.285100007987978 27.421374927090852 26.022122179904354 25.271402885016812 46 22.42828528237505 29.806766270231815 25.587304840865897 22.177643606527234 47 21.34342732521775 27.84714927120997 28.75536739427609 22.0540560092962 48 22.243808186020434 26.480451305733112 27.217153958495665 24.05858654975079 49 21.072740343965382 26.554754580653718 29.012489883149435 23.360015192231465 50 20.94719343116849 26.555508163563662 28.178273601839948 24.319024803427897 51 20.75171402432867 26.8197143317905 26.31195016706933 26.116621476811503 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 128.0 1 477.5 2 827.0 3 2511.0 4 4195.0 5 3025.5 6 1856.0 7 1777.5 8 1699.0 9 1636.0 10 1573.0 11 1679.5 12 1786.0 13 1672.0 14 1558.0 15 1630.5 16 1703.0 17 1667.0 18 1631.0 19 1697.0 20 1763.0 21 1983.5 22 2204.0 23 2434.0 24 2664.0 25 3370.5 26 4865.0 27 5653.0 28 6527.5 29 7402.0 30 9166.5 31 10931.0 32 13199.0 33 15467.0 34 17808.5 35 20150.0 36 21530.5 37 22911.0 38 25171.5 39 27432.0 40 30718.5 41 34005.0 42 36610.0 43 39215.0 44 43232.0 45 47249.0 46 58467.0 47 69685.0 48 62910.0 49 56135.0 50 53594.0 51 51053.0 52 46165.0 53 41277.0 54 38346.5 55 35416.0 56 33931.0 57 32446.0 58 31471.5 59 30497.0 60 29015.5 61 27534.0 62 24456.0 63 21378.0 64 17605.0 65 13832.0 66 11282.5 67 8733.0 68 7373.0 69 6013.0 70 5046.5 71 4080.0 72 3438.0 73 2796.0 74 2443.5 75 1668.5 76 1246.0 77 957.0 78 668.0 79 461.5 80 255.0 81 203.5 82 152.0 83 103.5 84 55.0 85 45.5 86 36.0 87 29.5 88 23.0 89 15.0 90 7.0 91 6.5 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 663497.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.040435769463176 #Duplication Level Percentage of deduplicated Percentage of total 1 74.18305217179993 23.026742661214918 2 8.55133580237535 5.308743794334857 3 3.656703675994137 3.405170267479677 4 2.199803213629975 2.7313140143255974 5 1.492985717015041 2.317146362686565 6 1.086273990902893 2.02310508255958 7 0.8556007410013167 1.8590753891749527 8 0.6746590609561757 1.6753368998317208 9 0.5126707025352504 1.43221698116379 >10 6.482242794940387 46.08451195504756 >50 0.2685735353844957 5.033955803259316 >100 0.030804133090156418 1.814339623489544 >500 0.0028878874772021645 0.6216623166452563 >1k 0.0019252583181347761 1.8847080327997856 >5k 4.8131457953369403E-4 0.7819708159868473 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGC 5234 0.7888505901307769 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCG 4941 0.7446906316079802 No Hit GAATCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTC 3879 0.584629621535591 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2093 0.3154498061031173 No Hit GCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCTGC 1702 0.25651962254539207 Illumina PCR Primer Index 5 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCT 936 0.14107072074176671 No Hit GAACTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCT 720 0.10851593903212825 Illumina PCR Primer Index 5 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 698 0.10520017422836878 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTC 688 0.10369300840847812 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0143316397813406E-4 0.0 0.0 0.06932962771497082 0.0 2 3.0143316397813406E-4 0.0 0.0 0.5029412340975167 0.0 3 3.0143316397813406E-4 0.0 0.0 0.6221580504508687 0.0 4 3.0143316397813406E-4 0.0 0.0 0.9082181230661178 0.0 5 3.0143316397813406E-4 0.0 0.0 2.019451482071509 0.0 6 3.0143316397813406E-4 0.0 0.0 2.3972979531181 0.0 7 3.0143316397813406E-4 0.0 0.0 2.820811548507378 0.0 8 3.0143316397813406E-4 0.0 0.0 3.452012593877591 0.0 9 3.0143316397813406E-4 0.0 0.0 3.6301595937886684 0.0 10 3.0143316397813406E-4 0.0 0.0 4.924061450164809 0.0 11 3.0143316397813406E-4 0.0 0.0 5.589324443064551 0.0 12 3.0143316397813406E-4 0.0 0.0 7.0018402494660865 0.0 13 3.0143316397813406E-4 0.0 0.0 7.255948406699654 0.0 14 3.0143316397813406E-4 0.0 0.0 7.384961800882295 0.0 15 3.0143316397813406E-4 0.0 0.0 7.65384018315079 0.0 16 3.0143316397813406E-4 0.0 0.0 8.045251146576398 0.0 17 3.0143316397813406E-4 0.0 0.0 8.508101769864822 0.0 18 3.0143316397813406E-4 0.0 0.0 9.001698575879017 0.0 19 3.0143316397813406E-4 0.0 0.0 9.338550136624582 0.0 20 3.0143316397813406E-4 0.0 0.0 9.651889910579852 0.0 21 3.0143316397813406E-4 0.0 0.0 10.03817651021783 0.0 22 3.0143316397813406E-4 0.0 0.0 10.465458020156836 0.0 23 3.0143316397813406E-4 0.0 0.0 10.90102894210524 0.0 24 3.0143316397813406E-4 0.0 0.0 11.249334963081973 0.0 25 3.0143316397813406E-4 0.0 0.0 11.578047828400129 0.0 26 3.0143316397813406E-4 0.0 0.0 11.878425976304339 0.0 27 3.0143316397813406E-4 0.0 0.0 12.18679210305397 0.0 28 3.0143316397813406E-4 0.0 0.0 12.498021844861393 0.0 29 3.0143316397813406E-4 0.0 0.0 12.825528977523636 0.0 30 3.0143316397813406E-4 0.0 0.0 13.212117010325594 0.0 31 3.0143316397813406E-4 0.0 0.0 13.569013876475704 0.0 32 3.0143316397813406E-4 0.0 0.0 13.92169067833012 0.0 33 3.0143316397813406E-4 0.0 0.0 14.259295821985631 0.0 34 3.0143316397813406E-4 0.0 0.0 14.598860281207 0.0 35 3.0143316397813406E-4 0.0 0.0 14.944453403707929 0.0 36 3.0143316397813406E-4 0.0 0.0 15.308584665793516 0.0 37 3.0143316397813406E-4 0.0 0.0 15.673921660535013 0.0 38 3.0143316397813406E-4 0.0 0.0 16.03639504021872 0.0 39 3.0143316397813406E-4 0.0 0.0 16.379275264243848 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGTA 25 3.8890168E-5 45.0 43 GGTCGAT 20 7.0311275E-4 45.0 1 CCGTGAC 25 3.8890168E-5 45.0 31 TGACCGA 20 7.0311275E-4 45.0 26 CTCGCGG 25 3.8890168E-5 45.0 2 GCGATAT 55 1.8189894E-12 45.0 9 TTTGCGC 20 7.0311275E-4 45.0 13 AATAGCG 25 3.8890168E-5 45.0 1 TAGTCCG 20 7.0311275E-4 45.0 1 ATTTCGG 20 7.0311275E-4 45.0 2 TACGGCT 610 0.0 42.786884 7 TACGGGT 90 0.0 42.500004 4 ACGGCTG 695 0.0 41.43885 8 TATACGG 60 3.6379788E-12 41.249996 2 GCGTATG 55 6.002665E-11 40.909092 1 CGTTTTT 1320 0.0 40.56818 1 TGCGGGT 95 0.0 40.263157 4 TCGATCA 45 1.9261279E-8 40.000004 17 TTGTCGC 40 3.4552795E-7 39.375 38 CAAACGG 35 6.244296E-6 38.571426 2 >>END_MODULE