##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934640.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1582062 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.169580585337364 31.0 31.0 33.0 28.0 34.0 2 31.22945055250679 31.0 31.0 34.0 28.0 34.0 3 30.970553619263974 31.0 31.0 34.0 27.0 34.0 4 34.934149230561125 35.0 35.0 37.0 32.0 37.0 5 35.180001795125605 35.0 35.0 37.0 33.0 37.0 6 35.16081291377961 36.0 35.0 37.0 32.0 37.0 7 31.027383250466794 35.0 35.0 37.0 0.0 37.0 8 33.08006007349901 36.0 35.0 37.0 17.0 37.0 9 36.470937927843536 39.0 35.0 39.0 32.0 39.0 10 36.146986654126074 37.0 35.0 39.0 32.0 39.0 11 36.36364314420042 38.0 35.0 39.0 32.0 39.0 12 36.40022957380937 38.0 35.0 39.0 32.0 39.0 13 36.364575471757746 38.0 35.0 39.0 32.0 39.0 14 37.375966302205605 39.0 36.0 41.0 32.0 41.0 15 37.56751505313951 39.0 36.0 41.0 32.0 41.0 16 37.48431477401012 39.0 36.0 41.0 32.0 41.0 17 37.39920116910715 39.0 36.0 41.0 32.0 41.0 18 37.303348414916734 39.0 36.0 40.0 32.0 41.0 19 37.06280474469395 39.0 35.0 40.0 32.0 41.0 20 37.020164822870406 39.0 35.0 40.0 32.0 41.0 21 37.007389090945864 39.0 35.0 40.0 31.0 41.0 22 37.10537134448587 39.0 35.0 40.0 32.0 41.0 23 37.14440963754897 39.0 35.0 40.0 32.0 41.0 24 37.081955068764685 39.0 35.0 40.0 32.0 41.0 25 36.71995914192996 39.0 35.0 40.0 31.0 41.0 26 36.71787957741226 39.0 35.0 40.0 31.0 41.0 27 36.73013194173174 39.0 35.0 40.0 31.0 41.0 28 36.69983098007537 39.0 35.0 40.0 31.0 41.0 29 36.63339553064292 39.0 35.0 40.0 31.0 41.0 30 36.3759448112653 38.0 35.0 40.0 30.0 41.0 31 36.331087530071514 38.0 35.0 40.0 30.0 41.0 32 36.1612737048232 38.0 35.0 40.0 30.0 41.0 33 35.96716563573362 38.0 35.0 40.0 29.0 41.0 34 35.81401550634552 38.0 35.0 40.0 29.0 41.0 35 35.696583319743475 38.0 35.0 40.0 28.0 41.0 36 35.59807769859841 38.0 35.0 40.0 27.0 41.0 37 35.50216805662483 38.0 34.0 40.0 27.0 41.0 38 35.34838773701663 38.0 34.0 40.0 26.0 41.0 39 35.25053253285902 38.0 34.0 40.0 26.0 41.0 40 35.12516323633334 38.0 34.0 40.0 25.0 41.0 41 34.940762119310115 38.0 34.0 40.0 24.0 41.0 42 34.92800914249884 38.0 34.0 40.0 25.0 41.0 43 34.89270584844336 38.0 34.0 40.0 25.0 41.0 44 34.70107176583471 37.0 34.0 40.0 24.0 41.0 45 34.605636188720794 37.0 34.0 40.0 24.0 41.0 46 34.51298874506814 37.0 33.0 40.0 24.0 41.0 47 34.45015998108797 37.0 33.0 40.0 23.0 41.0 48 34.36245861413775 37.0 33.0 40.0 23.0 41.0 49 34.248136293015065 36.0 33.0 40.0 24.0 41.0 50 34.08976828973833 36.0 33.0 40.0 23.0 41.0 51 32.455313382155694 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 8.0 8 70.0 9 139.0 10 155.0 11 97.0 12 74.0 13 55.0 14 88.0 15 163.0 16 305.0 17 586.0 18 1112.0 19 1921.0 20 2987.0 21 4638.0 22 6820.0 23 9488.0 24 13660.0 25 18654.0 26 23897.0 27 26722.0 28 28953.0 29 32413.0 30 38434.0 31 47638.0 32 61851.0 33 84694.0 34 126209.0 35 136970.0 36 164036.0 37 235587.0 38 292047.0 39 221585.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.726216798077445 20.60197387965832 24.562311717239908 14.109497605024329 2 34.451367898350384 23.41570684334748 24.902753495122187 17.230171763179953 3 31.841356407018186 23.042839029064602 29.21219269535581 15.90361186856141 4 28.37948196720482 25.649437253407264 27.397535621233555 18.57354515815436 5 25.343128145420344 29.09658407824725 26.59345841060591 18.9668293657265 6 25.98172511570343 33.8192814188066 25.682811419527173 14.5161820459628 7 70.52808297019965 16.855218063514577 9.336549389341252 3.2801495769445195 8 83.07809681289355 4.438511259356461 9.282253160748441 3.201138767001546 9 77.7180666750102 5.891678075827622 10.998241535413909 5.39201371374826 10 43.732230468843824 24.33425491542051 17.590271430576045 14.34324318515962 11 32.09722501393751 24.83404569479578 24.59119806935506 18.477531221911658 12 27.560108263772214 21.980870534783087 29.95363013586067 20.50539106558403 13 24.975127397029954 22.519850675890073 32.29942947874356 20.20559244833641 14 21.57987487216051 24.258214911931393 32.66231032664965 21.49959988925845 15 21.23589340999278 23.317607021722285 34.26306933609429 21.18343023219065 16 25.567582054306342 23.491304386300914 29.926703251832105 21.014410307560638 17 26.268123499584718 22.566372240784496 28.60273491177969 22.562769347851095 18 27.339446873763478 21.878346107801086 29.303276357058067 21.478930661377365 19 26.125019120616006 24.64479900282037 27.411504732431474 21.818677144132153 20 27.35000271797186 25.033152935852073 27.442097718041392 20.174746628134674 21 27.097926629929802 24.808888652909936 28.50728985336858 19.585894863791683 22 26.42361677355249 21.488095915330753 29.099112424165423 22.989174886951332 23 24.164539695663002 24.303725138458542 29.44840341276132 22.083331753117136 24 24.443605876381582 23.05036085817117 30.019683172972993 22.486350092474254 25 24.80515934268063 25.27043820027281 27.793474592019784 22.13092786502678 26 23.95487661039833 24.4618731756404 27.237870576500793 24.34537963746048 27 23.820684650791183 23.82150636321459 28.526631699642618 23.83117728635161 28 22.490901115126967 24.633168611596766 29.153282235462324 23.722648037813943 29 23.343459358735625 24.68392515590413 28.531056304999424 23.441559180360823 30 24.674001398175292 24.140141157552613 28.95303723874286 22.23282020552924 31 25.781732953575776 24.802504579466543 27.26764184968731 22.148120617270372 32 25.480859789312937 24.54101040287928 27.4725642863554 22.505565521452382 33 24.841757149846213 24.03963940730515 26.665010600090262 24.453592842758376 34 23.05895723429297 25.348500880496466 28.75051673069703 22.84202515451354 35 23.594334482466554 26.38183585725465 27.551701513594285 22.47212814668452 36 25.070762081384927 27.15443516120101 25.96067663593462 21.814126121479436 37 24.040587537024464 26.493019869006396 26.64276115601032 22.823631437958817 38 24.381029314906748 26.347576770063373 26.83030121449096 22.441092700538917 39 24.57261472685647 24.458649534594727 26.628855253460358 24.339880485088447 40 26.138040102094607 23.826499846402985 27.559349759996763 22.476110291505645 41 22.826602244412673 24.680511888914594 27.41953223072168 25.073353635951058 42 23.502239482397023 24.753454668653944 27.938728065018942 23.805577783930087 43 23.162872251529965 24.242349541294843 28.460578662530295 24.1341995446449 44 23.533717389078305 24.140014740256703 28.198894859999164 24.127373010665828 45 23.31223428664616 24.326543460370072 27.168277855103025 25.19294439788074 46 23.612412155781506 24.798332808701556 27.33755061432485 24.251704421192088 47 22.62850634172365 24.947442009225934 29.239562039920052 23.184489609130363 48 22.857258438670545 25.468660520257743 28.28884076603825 23.38524027503347 49 23.513553830380857 24.521668556605242 28.763853755415404 23.2009238575985 50 22.20292251504682 25.640967294581372 28.540727228136443 23.615382962235362 51 22.62679970822888 24.140520409440338 27.85390205946417 25.37877782286661 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 488.0 1 1312.0 2 2136.0 3 11665.5 4 21195.0 5 14385.5 6 7576.0 7 7137.0 8 6698.0 9 6570.0 10 6442.0 11 6389.0 12 6336.0 13 6116.5 14 5897.0 15 5613.0 16 5329.0 17 5028.5 18 4728.0 19 4745.0 20 4762.0 21 4975.0 22 5188.0 23 5949.5 24 6711.0 25 7337.0 26 9585.0 27 11207.0 28 13075.5 29 14944.0 30 17475.5 31 20007.0 32 24013.0 33 28019.0 34 32742.5 35 37466.0 36 40481.0 37 43496.0 38 47317.5 39 51139.0 40 55457.0 41 59775.0 42 65340.0 43 70905.0 44 77697.0 45 84489.0 46 98587.0 47 112685.0 48 112752.5 49 112820.0 50 115040.0 51 117260.0 52 110651.5 53 104043.0 54 101623.0 55 99203.0 56 98526.0 57 97849.0 58 93512.5 59 89176.0 60 84891.0 61 80606.0 62 75980.0 63 71354.0 64 63762.0 65 56170.0 66 49699.5 67 43229.0 68 36961.5 69 30694.0 70 25964.5 71 21235.0 72 17374.5 73 13514.0 74 11177.5 75 6969.5 76 5098.0 77 4015.5 78 2933.0 79 2081.0 80 1229.0 81 915.0 82 601.0 83 445.5 84 290.0 85 214.5 86 139.0 87 121.5 88 104.0 89 68.5 90 33.0 91 31.5 92 30.0 93 23.0 94 16.0 95 14.0 96 12.0 97 6.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1582062.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.043594351963026 #Duplication Level Percentage of deduplicated Percentage of total 1 72.78752157655916 20.412237289777813 2 8.340412192660756 4.677902725182895 3 3.7659123052331385 3.1682915115907235 4 2.4307272471246577 2.7266531559451077 5 1.688001140085036 2.3668809619097937 6 1.3191162338127183 2.219565633847985 7 0.9725613614443227 1.9091881411916236 8 0.7598765317566917 1.704773537132897 9 0.5747601820695721 1.4506507256057544 >10 6.817102472354211 47.09270591400668 >50 0.5090887316394443 8.518501401348404 >100 0.030694036452087927 1.591428279727851 >500 0.002446625099546656 0.45745599528182807 >1k 0.0015569432451660538 0.981278663454284 >5k 0.0 0.0 >10k+ 2.2242046359515052E-4 0.722486063996375 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11583 0.7321457692555665 No Hit GAATCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 4290 0.2711650997242839 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCG 2779 0.17565683266521792 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGC 2712 0.17142185325227458 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1696 0.10720186693062599 No Hit GCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 1660 0.10492635560426836 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.528345918175141E-4 0.0 0.0 0.04860745027691709 0.0 2 2.528345918175141E-4 0.0 0.0 0.24246837355299602 0.0 3 2.528345918175141E-4 0.0 0.0 0.3590883290288244 0.0 4 2.528345918175141E-4 0.0 0.0 0.5751354877368902 0.0 5 2.528345918175141E-4 0.0 0.0 1.194453820393891 0.0 6 2.528345918175141E-4 0.0 0.0 1.7066334947682202 0.0 7 2.528345918175141E-4 0.0 0.0 2.067744500531585 0.0 8 2.528345918175141E-4 0.0 0.0 2.6189239106937654 0.0 9 2.528345918175141E-4 0.0 0.0 2.9076610145493667 0.0 10 2.528345918175141E-4 0.0 0.0 3.5488495393985824 0.0 11 2.528345918175141E-4 0.0 0.0 4.06678120073676 0.0 12 2.528345918175141E-4 0.0 0.0 4.6414742279379695 0.0 13 2.528345918175141E-4 0.0 0.0 4.87332354863463 0.0 14 2.528345918175141E-4 0.0 0.0 5.017565683266522 0.0 15 2.528345918175141E-4 0.0 0.0 5.164905041648178 0.0 16 2.528345918175141E-4 0.0 0.0 5.393151469411439 0.0 17 2.528345918175141E-4 0.0 0.0 5.651169170361213 0.0 18 2.528345918175141E-4 0.0 0.0 5.9742917787039955 0.0 19 2.528345918175141E-4 0.0 0.0 6.177381164581413 0.0 20 3.160432397718926E-4 0.0 0.0 6.385906494182908 0.0 21 3.160432397718926E-4 0.0 0.0 6.633621185516118 0.0 22 3.160432397718926E-4 0.0 0.0 6.898655046388827 0.0 23 3.160432397718926E-4 0.0 0.0 7.16071810080768 0.0 24 3.160432397718926E-4 0.0 0.0 7.390355118825937 0.0 25 3.792518877262712E-4 0.0 0.0 7.594961512254261 0.0 26 3.792518877262712E-4 0.0 0.0 7.791097946856697 0.0 27 3.792518877262712E-4 0.0 0.0 8.00840927852385 0.0 28 3.792518877262712E-4 0.0 0.0 8.221232796186243 0.0 29 3.792518877262712E-4 0.0 0.0 8.450490562316775 0.0 30 3.792518877262712E-4 0.0 0.0 8.776583977113413 0.0 31 4.424605356806497E-4 0.0 0.0 9.011972982095518 0.0 32 4.424605356806497E-4 0.0 0.0 9.257475370750324 0.0 33 4.424605356806497E-4 0.0 0.0 9.507275947466029 0.0 34 4.424605356806497E-4 0.0 0.0 9.756697272294007 0.0 35 4.424605356806497E-4 0.0 0.0 10.043790951302794 0.0 36 4.424605356806497E-4 0.0 0.0 10.29378115396236 0.0 37 4.424605356806497E-4 0.0 0.0 10.552114898151906 0.0 38 4.424605356806497E-4 0.0 0.0 10.866830756316757 0.0 39 4.424605356806497E-4 0.0 0.0 11.386405842501748 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 6330 0.0 42.085304 1 ATTAGCG 60 3.6379788E-12 41.250004 1 TACGAAT 275 0.0 40.909092 12 CGAATAT 275 0.0 40.909092 14 CGTTTTA 400 0.0 37.6875 1 GTTAACG 60 1.5643309E-10 37.500004 1 CCGACTA 30 1.14011615E-4 37.500004 43 CACGACC 685 0.0 37.116787 27 GCTACGA 335 0.0 36.268658 10 CGCACTA 25 0.0021073478 36.0 12 TAATCCG 25 0.0021073478 36.0 24 CGGGATA 270 0.0 35.833332 6 AACACGT 655 0.0 35.38168 41 AGGCGAT 340 0.0 35.07353 7 CGGGTAT 135 0.0 35.0 6 ATTCGAC 45 8.702682E-7 35.0 9 GGGCGAT 2380 0.0 34.884457 7 ATAACGG 220 0.0 34.772728 2 GCGAGAC 735 0.0 34.591835 21 TCAAGCG 735 0.0 34.591835 17 >>END_MODULE