SRR2934639.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934639.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	477153
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCG	4646	0.9736918766098087	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGC	3806	0.7976477146743288	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTC	3553	0.7446248897104283	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2042	0.4279549746098211	No Hit
GCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	1362	0.2854430339953851	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCT	780	0.1634695789400884	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	755	0.15823016935867532	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	641	0.13433846166743163	No Hit
GAACTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCT	638	0.13370973251766205	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTC	609	0.12763201740322286	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	551	0.11547658717434449	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGTGTATTCGTA	496	0.1039498860952357	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGGT	20	7.0291344E-4	45.0	28
TAGAACG	25	3.8873644E-5	45.0	1
GGCCGAT	40	6.8012014E-9	45.0	8
CCTACCG	20	7.0291344E-4	45.0	11
CCTGTCG	20	7.0291344E-4	45.0	37
CTACGTT	20	7.0291344E-4	45.0	20
CTTGCGA	20	7.0291344E-4	45.0	15
CCATAGT	25	3.8873644E-5	45.0	31
TACCTCG	20	7.0291344E-4	45.0	20
ATGACTC	20	7.0291344E-4	45.0	34
ACCGTTC	20	7.0291344E-4	45.0	24
CGGTCTA	20	7.0291344E-4	45.0	31
ACCCGGT	20	7.0291344E-4	45.0	37
GTAAGGT	20	7.0291344E-4	45.0	4
ACGGTAC	25	3.8873644E-5	45.0	13
TAGCACG	30	2.1628239E-6	44.999996	1
TACGGCT	405	0.0	42.222225	7
TACGAAT	105	0.0	40.714287	12
TGCGATG	50	1.0786607E-9	40.5	1
CTACGGG	50	1.0786607E-9	40.5	3