##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934637.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 974980 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.164688506430902 31.0 31.0 33.0 28.0 34.0 2 31.21058790949558 31.0 31.0 34.0 28.0 34.0 3 30.99813534636608 31.0 31.0 34.0 28.0 34.0 4 34.96079201624649 35.0 35.0 37.0 32.0 37.0 5 35.174303062626926 35.0 35.0 37.0 33.0 37.0 6 35.12125376930809 36.0 35.0 37.0 32.0 37.0 7 30.912990010051487 35.0 35.0 37.0 0.0 37.0 8 32.98608176577981 35.0 35.0 37.0 17.0 37.0 9 36.34637325893865 39.0 35.0 39.0 32.0 39.0 10 36.09493117807545 37.0 35.0 39.0 32.0 39.0 11 36.28056370387085 37.0 35.0 39.0 32.0 39.0 12 36.2921126587212 38.0 35.0 39.0 32.0 39.0 13 36.183956593981414 38.0 35.0 39.0 32.0 39.0 14 37.125656936552545 39.0 36.0 40.0 31.0 41.0 15 37.31680957558104 39.0 36.0 41.0 32.0 41.0 16 37.32584770969661 39.0 36.0 40.0 32.0 41.0 17 37.24155059590966 39.0 36.0 40.0 32.0 41.0 18 37.17980061129459 39.0 36.0 40.0 32.0 41.0 19 36.98010830991405 39.0 35.0 40.0 31.0 41.0 20 36.934209932511436 39.0 35.0 40.0 31.0 41.0 21 36.951797985599704 39.0 35.0 40.0 31.0 41.0 22 37.08188988492071 39.0 35.0 40.0 32.0 41.0 23 37.144105520113236 39.0 35.0 40.0 32.0 41.0 24 37.05529139059263 39.0 35.0 40.0 32.0 41.0 25 36.76423413813617 39.0 35.0 40.0 31.0 41.0 26 36.725848735358674 39.0 35.0 40.0 31.0 41.0 27 36.757340663398224 39.0 35.0 40.0 31.0 41.0 28 36.743990645961965 39.0 35.0 40.0 31.0 41.0 29 36.68961927424152 39.0 35.0 40.0 31.0 41.0 30 36.43631459106854 38.0 35.0 40.0 30.0 41.0 31 36.414824919485525 38.0 35.0 40.0 30.0 41.0 32 36.27042708568381 38.0 35.0 40.0 30.0 41.0 33 36.1199983589407 38.0 35.0 40.0 30.0 41.0 34 36.02100658475046 38.0 35.0 40.0 29.0 41.0 35 35.90969353217502 38.0 35.0 40.0 29.0 41.0 36 35.839876715419805 38.0 35.0 40.0 29.0 41.0 37 35.708210424829225 38.0 35.0 40.0 28.0 41.0 38 35.556492440870585 38.0 34.0 40.0 28.0 41.0 39 35.45495189644916 38.0 34.0 40.0 27.0 41.0 40 35.300795913762336 38.0 34.0 40.0 26.0 41.0 41 35.11755010359187 38.0 34.0 40.0 26.0 41.0 42 35.148454327268254 38.0 34.0 40.0 26.0 41.0 43 35.11595417341894 38.0 34.0 40.0 26.0 41.0 44 34.9343801924142 38.0 34.0 40.0 26.0 41.0 45 34.818163449506656 37.0 34.0 40.0 25.0 41.0 46 34.72748876900039 37.0 34.0 40.0 25.0 41.0 47 34.628781103202115 37.0 33.0 40.0 24.0 41.0 48 34.557353997005066 37.0 33.0 40.0 24.0 41.0 49 34.4823165603397 37.0 33.0 40.0 24.0 41.0 50 34.32992061375618 36.0 33.0 40.0 24.0 41.0 51 32.62066811626905 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 7.0 8 55.0 9 93.0 10 84.0 11 71.0 12 49.0 13 42.0 14 69.0 15 121.0 16 207.0 17 359.0 18 756.0 19 1161.0 20 1811.0 21 2772.0 22 4006.0 23 5496.0 24 7633.0 25 10387.0 26 12901.0 27 15012.0 28 17010.0 29 20030.0 30 24185.0 31 30677.0 32 39548.0 33 54274.0 34 79286.0 35 84752.0 36 99930.0 37 143436.0 38 180331.0 39 138422.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.49555888325914 20.603704691378287 23.580688834642764 12.32004759071981 2 32.816057765287496 24.599273831258078 25.579088801821577 17.005579601632853 3 32.8317503948799 24.32049888202835 26.96957886315617 15.87817185993559 4 28.5519702968266 25.72155326263103 27.05378571868141 18.67269072186096 5 26.802908777615954 29.489733122730723 24.86953578534944 18.837822314303885 6 25.982686824345112 35.793452173377915 24.637633592483947 13.586227409793022 7 70.28780077540053 17.27696978399557 9.155162157172454 3.280067283431455 8 82.62497692260354 5.941250076924655 8.076883628382122 3.3568893720896837 9 77.17542923957414 5.964532605797042 9.652300560011486 7.207737594617325 10 45.14420808631972 24.131982194506556 16.46208127346202 14.261728445711707 11 33.91433670434265 24.50286159716097 23.653613407454515 17.929188291041868 12 29.50881043713717 22.612771544031673 27.922829186239717 19.955588832591438 13 26.025251800036926 22.69646556852448 31.780651910808427 19.497630720630166 14 22.358202219532707 25.38339247984574 30.965865966481367 21.292539334140187 15 21.061047406100638 24.222548154833945 34.41516749061519 20.301236948450224 16 26.684034544298346 23.72058914029006 28.60971507107838 20.98566124433322 17 27.042298303554947 23.109397115838274 28.17329586247923 21.67500871812755 18 27.205276005661656 22.783339145418367 28.588073601509773 21.423311247410204 19 26.585776118484482 25.358468891669574 26.39438757718107 21.661367412664877 20 26.972143018318324 25.908121192229583 27.720363494635787 19.399372294816303 21 26.182690926993374 25.938378223143037 28.435455086258184 19.44347576360541 22 25.54411372540975 21.79470348109705 29.68337812057683 22.97780467291637 23 23.696588647972266 26.04514964409526 28.91638802847238 21.34187367946009 24 23.692485999712815 24.767379843689103 28.651869781944246 22.88826437465384 25 25.024410757143734 26.1645367084453 26.473158423762538 22.337894110648424 26 23.48355863710025 24.82758620689655 27.27307226814909 24.41578288785411 27 23.323452788775153 25.00933352479025 28.365607499641015 23.301606186793574 28 21.853576483620177 25.67406510902788 28.88602843135244 23.586329975999508 29 24.723891772138913 25.634577119530654 27.27943137295124 22.362099735379186 30 25.034769943998853 25.686270487599742 27.942214199265624 21.336745369135777 31 26.831217050606167 24.267472153274937 26.624341012123327 22.276969783995572 32 26.952758005292416 25.452111838191556 25.948839976204642 21.646290180311393 33 25.463394120905043 25.830786272538926 25.437034605838065 23.268785000717966 34 24.721430183183244 26.009456604238036 27.732568873207658 21.536544339371062 35 23.64735686885885 27.578719563478227 27.05040103386736 21.723522533795563 36 26.500338468481406 26.708958132474514 25.12933598637921 21.661367412664877 37 24.329114443373197 28.081191409054547 25.722784057108868 21.866910090463392 38 25.020820939916717 27.38661305872941 25.20913249502554 22.383433506328334 39 23.80069334755585 25.796221460953046 25.52842109581735 24.874664095673758 40 25.02892367022913 25.375187183326837 27.819750148721 21.77613899772303 41 22.905290364930565 25.61149972307124 26.797472768672176 24.685737143326016 42 22.922418921413772 24.428398531251926 29.315165439291064 23.33401710804324 43 23.41391618289606 24.248805103694433 27.335637654105728 25.00164105930378 44 24.114238240784427 24.23013805411393 27.88128987261277 23.77433383248887 45 22.995343494225523 24.094135264313113 27.052554924203577 25.85796631725779 46 23.972594309626864 25.651397977394407 26.857884264292604 23.518123448686126 47 21.68629100084104 25.442573180988326 30.20769656813473 22.6634392500359 48 22.869392192660364 26.144228599561014 27.703132371946094 23.28324683583253 49 23.16139818252682 24.739994666557262 28.776385156618595 23.32222199429732 50 22.500256415516215 25.712732568873207 28.01247205070873 23.774538964901843 51 22.254097519949127 26.11181767831135 26.504030851914912 25.13005394982461 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 281.0 1 788.0 2 1295.0 3 4520.5 4 7746.0 5 5359.0 6 2972.0 7 2813.0 8 2654.0 9 2623.5 10 2593.0 11 2637.0 12 2681.0 13 2736.5 14 2792.0 15 2783.5 16 2775.0 17 2706.5 18 2638.0 19 2647.5 20 2657.0 21 2769.5 22 2882.0 23 3330.0 24 3778.0 25 4687.5 26 6547.0 27 7497.0 28 8690.5 29 9884.0 30 12041.5 31 14199.0 32 15844.5 33 17490.0 34 20753.5 35 24017.0 36 25006.0 37 25995.0 38 29074.0 39 32153.0 40 35014.5 41 37876.0 42 42613.5 43 47351.0 44 52434.0 45 57517.0 46 72008.5 47 86500.0 48 80013.5 49 73527.0 50 73663.5 51 73800.0 52 70540.5 53 67281.0 54 64391.5 55 61502.0 56 59177.5 57 56853.0 58 55017.0 59 53181.0 60 50789.5 61 48398.0 62 43768.5 63 39139.0 64 35121.5 65 31104.0 66 26727.0 67 22350.0 68 19375.5 69 16401.0 70 13398.0 71 10395.0 72 8904.0 73 7413.0 74 5935.0 75 3510.5 76 2564.0 77 2007.5 78 1451.0 79 1112.0 80 773.0 81 536.0 82 299.0 83 211.5 84 124.0 85 94.5 86 65.0 87 49.5 88 34.0 89 29.0 90 24.0 91 18.0 92 12.0 93 8.5 94 5.0 95 4.5 96 4.0 97 3.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 974980.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.386737918974703 #Duplication Level Percentage of deduplicated Percentage of total 1 73.4252167420645 21.57727601042963 2 8.45524628906944 4.969442134745341 3 3.678575506528239 3.243040029765149 4 2.404085226528622 2.8259288994750213 5 1.6181439572612144 2.3775986193603953 6 1.1821187471346406 2.0843168286691443 7 0.8933304857198991 1.8376448201216737 8 0.6765968833320088 1.5906380229818278 9 0.536267823126226 1.4183245775330537 >10 6.710411307663897 47.18982926349517 >50 0.39022660429796224 6.830396783910478 >100 0.025672782132257255 1.3956121504078465 >500 0.0020538225705798202 0.43053337204442255 >1k 0.0013692150470532133 1.1194873592248549 >5k 6.846075235266067E-4 1.1099311278360184 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGC 5764 0.5911916141869576 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCG 5270 0.5405239081827319 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTC 4673 0.47929188291041863 RNA PCR Primer, Index 4 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4010 0.41129048801001045 No Hit GCTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCTGC 1411 0.1447209173521508 RNA PCR Primer, Index 48 (96% over 25bp) GAACTGTCTCTTATACACATCTGACGCGAGCAATCTCGTATGCCGTCTTCT 1035 0.10615602371330694 TruSeq Adapter, Index 4 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04738558739666455 0.0 2 0.0 0.0 0.0 0.30328827257995034 0.0 3 0.0 0.0 0.0 0.38636689983384276 0.0 4 0.0 0.0 0.0 0.6108843258323248 0.0 5 1.025662064862869E-4 0.0 0.0 1.4369525528728795 0.0 6 1.025662064862869E-4 0.0 0.0 1.766805472932778 0.0 7 1.025662064862869E-4 0.0 0.0 2.1387105376520545 0.0 8 1.025662064862869E-4 0.0 0.0 2.7301072842519845 0.0 9 1.025662064862869E-4 0.0 0.0 3.004471886602802 0.0 10 1.025662064862869E-4 0.0 0.0 4.067775749246138 0.0 11 1.025662064862869E-4 0.0 0.0 4.61824857945804 0.0 12 1.025662064862869E-4 0.0 0.0 5.699809226855936 0.0 13 1.025662064862869E-4 0.0 0.0 5.90935198670742 0.0 14 1.025662064862869E-4 0.0 0.0 6.028431352437999 0.0 15 1.025662064862869E-4 0.0 0.0 6.2242302406203205 0.0 16 1.025662064862869E-4 0.0 0.0 6.479414962358202 0.0 17 1.025662064862869E-4 0.0 0.0 6.754292395741451 0.0 18 1.025662064862869E-4 0.0 0.0 7.081478594432706 0.0 19 1.025662064862869E-4 0.0 0.0 7.30650885146362 0.0 20 1.025662064862869E-4 0.0 0.0 7.533487866417772 0.0 21 1.025662064862869E-4 0.0 0.0 7.786005866787011 0.0 22 1.025662064862869E-4 0.0 0.0 8.070421957373485 0.0 23 1.025662064862869E-4 0.0 0.0 8.319247574309216 0.0 24 2.051324129725738E-4 0.0 0.0 8.542944470655808 0.0 25 2.051324129725738E-4 0.0 0.0 8.742846007097581 0.0 26 2.051324129725738E-4 0.0 0.0 8.94397833801719 0.0 27 2.051324129725738E-4 0.0 0.0 9.19229112392049 0.0 28 2.051324129725738E-4 0.0 0.0 9.408705819606556 0.0 29 2.051324129725738E-4 0.0 0.0 9.650556934501221 0.0 30 3.076986194588607E-4 0.0 0.0 9.979897023528688 0.0 31 3.076986194588607E-4 0.0 0.0 10.226876448747667 0.0 32 3.076986194588607E-4 0.0 0.0 10.486266384951486 0.0 33 3.076986194588607E-4 0.0 0.0 10.72647644054237 0.0 34 3.076986194588607E-4 0.0 0.0 11.000943609099673 0.0 35 3.076986194588607E-4 0.0 0.0 11.296436849986666 0.0 36 3.076986194588607E-4 0.0 0.0 11.550595909659686 0.0 37 3.076986194588607E-4 0.0 0.0 11.827627233379147 0.0 38 3.076986194588607E-4 0.0 0.0 12.187942316765472 0.0 39 3.076986194588607E-4 0.0 0.0 12.845289134136085 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGTA 20 7.03276E-4 45.0 34 ACCGTTC 20 7.03276E-4 45.0 23 TAGTACG 25 3.8903694E-5 45.0 1 TTGCGAA 40 3.4574987E-7 39.375 1 TACGAAT 110 0.0 38.863636 12 TACGGCT 730 0.0 38.835617 7 CGTGAAT 35 6.2473155E-6 38.571426 25 CGTTTTT 2165 0.0 38.03695 1 AACCGAC 30 1.13979506E-4 37.499996 27 CGAATAT 115 0.0 37.173916 14 TGGGCGA 425 0.0 36.52941 6 GTTACGA 25 0.0021069525 36.0 43 TGCGAAA 25 0.0021069525 36.0 32 CCGACCA 25 0.0021069525 36.0 18 CTCGACC 25 0.0021069525 36.0 24 ATACGAT 25 0.0021069525 36.0 11 TGCGTAA 25 0.0021069525 36.0 1 CTTACGG 50 4.87762E-8 36.0 2 TGATACC 865 0.0 35.635838 4 TACGGGA 240 0.0 35.625 4 >>END_MODULE