SRR2934636.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934636.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	439619
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1835	0.41740689096695094	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGC	1381	0.31413564927812493	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCG	1153	0.2622725587383621	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTC	981	0.22314777113819012	No Hit
GCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC	647	0.14717289289134455	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	543	0.12351604457496151	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	20	7.028529E-4	45.0	1
CGGGTAT	40	6.7993824E-9	45.0	6
CGACGCA	25	3.8868624E-5	45.0	24
TCCGATG	25	3.8868624E-5	45.0	44
CGGCCTA	20	7.028529E-4	45.0	45
GCGCGAT	20	7.028529E-4	45.0	40
CGGTTGA	25	3.8868624E-5	45.0	30
ATTCGAA	20	7.028529E-4	45.0	11
TTATCGA	20	7.028529E-4	45.0	13
TTATACG	20	7.028529E-4	45.0	1
ATATCCG	20	7.028529E-4	45.0	40
TCATGCC	20	7.028529E-4	45.0	17
GATATAC	20	7.028529E-4	45.0	26
ATCCACG	20	7.028529E-4	45.0	43
GTCCGAT	25	3.8868624E-5	45.0	43
ACCGTTT	20	7.028529E-4	45.0	23
ATCGGAT	20	7.028529E-4	45.0	39
GCTAAGC	25	3.8868624E-5	45.0	38
CGTTTTA	45	3.8380676E-10	45.0	1
CGATACT	20	7.028529E-4	45.0	10