##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934636.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 439619 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.205505221566856 31.0 31.0 33.0 28.0 34.0 2 31.258080292253066 31.0 31.0 34.0 28.0 34.0 3 31.06328661864023 31.0 31.0 34.0 28.0 34.0 4 34.99798234380225 35.0 35.0 37.0 32.0 37.0 5 35.23831772512107 35.0 35.0 37.0 33.0 37.0 6 35.208726192453014 37.0 35.0 37.0 33.0 37.0 7 31.074018638866836 35.0 35.0 37.0 0.0 37.0 8 33.09368339402983 36.0 35.0 37.0 17.0 37.0 9 36.437785900973346 39.0 35.0 39.0 32.0 39.0 10 36.24389073265714 37.0 35.0 39.0 32.0 39.0 11 36.45452084646023 38.0 35.0 39.0 32.0 39.0 12 36.46018939126835 38.0 35.0 39.0 32.0 39.0 13 36.332378718845185 38.0 35.0 39.0 32.0 39.0 14 37.41526640113371 39.0 36.0 41.0 32.0 41.0 15 37.620480461490516 39.0 36.0 41.0 33.0 41.0 16 37.563804112197154 39.0 36.0 41.0 33.0 41.0 17 37.50060848143506 39.0 36.0 41.0 33.0 41.0 18 37.39844274246563 39.0 36.0 40.0 32.0 41.0 19 37.18963238622535 39.0 36.0 40.0 32.0 41.0 20 37.17713065176892 39.0 35.0 40.0 32.0 41.0 21 37.18248983779136 39.0 35.0 40.0 32.0 41.0 22 37.256981613624525 39.0 35.0 40.0 32.0 41.0 23 37.30678610342137 39.0 35.0 40.0 32.0 41.0 24 37.21020474547279 39.0 35.0 41.0 32.0 41.0 25 36.908682290801806 39.0 35.0 40.0 31.0 41.0 26 36.86593846034862 39.0 35.0 40.0 31.0 41.0 27 36.87136133788576 39.0 35.0 40.0 31.0 41.0 28 36.87917492192103 39.0 35.0 40.0 31.0 41.0 29 36.888173623069065 39.0 35.0 40.0 31.0 41.0 30 36.7034045389303 39.0 35.0 40.0 31.0 41.0 31 36.68614641314411 39.0 35.0 40.0 31.0 41.0 32 36.502812662783 39.0 35.0 40.0 31.0 41.0 33 36.35735261669764 39.0 35.0 40.0 30.0 41.0 34 36.23555624301952 39.0 35.0 40.0 30.0 41.0 35 36.164638016100305 39.0 35.0 40.0 30.0 41.0 36 36.0909651311704 38.0 35.0 40.0 30.0 41.0 37 36.017007909121304 38.0 35.0 40.0 30.0 41.0 38 35.93138376639772 38.0 35.0 40.0 29.0 41.0 39 35.886064978993176 38.0 35.0 40.0 29.0 41.0 40 35.75539501249946 38.0 35.0 40.0 29.0 41.0 41 35.630609687024446 38.0 35.0 40.0 28.0 41.0 42 35.60036986572464 38.0 35.0 40.0 28.0 41.0 43 35.530491175313166 38.0 35.0 40.0 28.0 41.0 44 35.34228502407767 38.0 34.0 40.0 27.0 41.0 45 35.2822580461718 38.0 34.0 40.0 27.0 41.0 46 35.173830066489394 38.0 34.0 40.0 27.0 41.0 47 35.136263446302365 38.0 34.0 40.0 27.0 41.0 48 35.065772862410405 37.0 34.0 40.0 26.0 41.0 49 34.96346836692682 37.0 34.0 40.0 26.0 41.0 50 34.805827318655474 37.0 34.0 40.0 26.0 41.0 51 33.20274146476836 35.0 31.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 25.0 9 46.0 10 68.0 11 35.0 12 22.0 13 19.0 14 27.0 15 37.0 16 66.0 17 130.0 18 265.0 19 445.0 20 692.0 21 962.0 22 1489.0 23 2093.0 24 2962.0 25 4022.0 26 5423.0 27 6291.0 28 7065.0 29 7970.0 30 9592.0 31 12319.0 32 15804.0 33 22541.0 34 36040.0 35 39178.0 36 43059.0 37 64482.0 38 86044.0 39 70403.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.39102495570028 21.40876531724061 23.882498254170088 12.317711472889025 2 33.5679304124708 24.04513908634522 25.256187744387752 17.130742756796224 3 33.61774627575242 22.588423157324865 27.56568756127465 16.22814300564807 4 29.406827275436232 26.131718601789277 26.0336791630935 18.427774959680995 5 25.98682040585143 30.666326978588277 23.692106119162272 19.65474649639802 6 26.42606438757197 36.477495285690566 23.48738339334742 13.609056933390049 7 70.65072255748728 17.475814284641928 8.510096242428103 3.36336691544269 8 81.65638882759845 6.198094258892358 8.576972332860954 3.5685445806482434 9 74.97583134486908 8.460280379146488 10.237046169524065 6.326842106460368 10 43.056373814598544 28.07885919398388 15.863964023392985 13.000802968024585 11 35.684990867091734 25.30918818340427 21.89918998041486 17.106630969089142 12 32.99993858318226 22.633917096394832 26.54889802306088 17.817246297362033 13 25.62810069628474 25.394716788855803 28.589756129739612 20.38742638511984 14 20.07101603888822 29.273530033961226 28.869771324715266 21.78568260243529 15 20.665849292228042 25.934047436530268 34.03833774245426 19.361765528787426 16 23.026074851177952 24.17479681269463 32.791121402851104 20.008006933276317 17 23.300858243160555 23.437567530065806 28.8918358851642 24.36973834160944 18 23.878176329958443 25.23526053241557 28.707812901626177 22.178750235999807 19 27.24108830601043 25.985683057374683 26.205646252777974 20.567582383836914 20 30.017583407450545 24.40749831103751 26.857346929955256 18.71757135155669 21 26.34872469115302 26.500446977951363 26.870540172285544 20.28028815861007 22 24.74233370259247 24.832639171646356 26.26911029778058 24.15591682798059 23 25.285986274478585 26.935823974850955 27.051606049784017 20.72658370088645 24 24.000327556361302 23.83882407266292 29.36611019996861 22.794738171007168 25 22.9569240637916 26.66013070408695 27.301822714668837 23.081122517452613 26 22.851605594844628 28.071807633428037 27.40987081996001 21.666715951767326 27 23.941185435570347 27.45195271359973 26.8000245667271 21.806837284102826 28 20.830537351661324 28.295182874261577 29.355646593982517 21.518633180094582 29 22.727634610878965 26.495215174958314 29.032867096281095 21.744283117881622 30 23.96370493540998 26.217019737545467 27.638022924395898 22.181252402648656 31 25.307823365232167 26.60076111360064 24.69365518778761 23.397760333379587 32 25.65721681728952 28.504000054592726 25.655624529422067 20.183158598695687 33 25.72432037741772 27.85616636223639 24.221883039632043 22.197630220713847 34 23.21214506197412 28.047240906330256 26.651031916272956 22.089582115422672 35 24.46709537121917 26.873952217715797 26.0273100116237 22.631642399441336 36 24.282389978595102 28.239452798900867 25.14836710879193 22.3297901137121 37 24.042636919696374 30.70090237228145 25.356274410341683 19.90018629768049 38 23.246947925362644 29.356556472763916 24.4941642649658 22.90233133690764 39 25.126302548343 27.36778892632029 25.532108484847104 21.973800040489603 40 23.58883487747345 26.778642415364214 27.796341832359385 21.836180874802956 41 21.13307204647661 28.10820278468401 27.13122044315646 23.627504725682922 42 23.287210061439563 27.666911575705328 25.673139695964004 23.372738666891106 43 23.913206663042317 27.656447969719235 25.06602307907529 23.36432228816316 44 22.46786421878945 27.931686301092533 26.051649269026132 23.548800211091876 45 22.533602960745554 27.80316592321988 24.83127435347426 24.83195676256031 46 22.52655140018971 29.671602000823437 24.963661716167866 22.838184882818986 47 23.201681455988027 27.699212272445006 26.874862096497193 22.224244175069778 48 23.08635432044566 25.982043542249084 27.55181190985831 23.379790227446946 49 21.936722480147584 26.024352905584152 28.34704596480134 23.691878649466926 50 20.90901439655702 27.906664634604056 27.81658663524552 23.367734333593408 51 21.381696423493977 26.85006789970406 26.123074753365984 25.645160923435977 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 120.0 1 427.5 2 735.0 3 2425.5 4 4116.0 5 2982.0 6 1848.0 7 1769.0 8 1690.0 9 1592.5 10 1495.0 11 1519.5 12 1544.0 13 1529.0 14 1514.0 15 1483.5 16 1453.0 17 1381.0 18 1309.0 19 1293.0 20 1277.0 21 1292.0 22 1307.0 23 1595.5 24 1884.0 25 2171.0 26 2852.0 27 3246.0 28 4282.0 29 5318.0 30 6261.0 31 7204.0 32 7657.0 33 8110.0 34 9521.5 35 10933.0 36 12281.5 37 13630.0 38 13979.0 39 14328.0 40 17661.5 41 20995.0 42 22757.0 43 24519.0 44 26751.5 45 28984.0 46 32757.5 47 36531.0 48 34155.5 49 31780.0 50 31508.5 51 31237.0 52 29260.5 53 27284.0 54 25785.0 55 24286.0 56 24396.0 57 24506.0 58 24210.0 59 23914.0 60 23303.0 61 22692.0 62 21277.0 63 19862.0 64 16217.0 65 12572.0 66 10452.5 67 8333.0 68 6974.5 69 5616.0 70 4942.5 71 4269.0 72 3437.5 73 2606.0 74 2174.5 75 1445.0 76 1147.0 77 867.5 78 588.0 79 490.5 80 393.0 81 270.5 82 148.0 83 100.5 84 53.0 85 33.5 86 14.0 87 13.5 88 13.0 89 9.0 90 5.0 91 4.5 92 4.0 93 4.5 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 439619.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.70834339456999 #Duplication Level Percentage of deduplicated Percentage of total 1 74.10296855663897 20.53270499324375 2 8.207107629810952 4.548107129659945 3 3.222180508627068 2.6784385203698697 4 1.987287000142521 2.202577224940553 5 1.4790762797389172 2.049137673288449 6 1.0776695499861382 1.7916262774132572 7 0.8225479074766199 1.5954007915193018 8 0.7402720369727058 1.6409369444670034 9 0.5535553085299615 1.380429051897178 >10 7.169061737705156 48.06376804313944 >50 0.5831648201276212 9.680304768987016 >100 0.05017355998277136 2.346063738480338 >500 0.0024675521303002307 0.49478379407818274 >1k 0.0024675521303002307 0.995721048515698 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1835 0.41740689096695094 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGC 1381 0.31413564927812493 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCG 1153 0.2622725587383621 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTC 981 0.22314777113819012 No Hit GCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 647 0.14717289289134455 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 543 0.12351604457496151 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08097921154454198 0.0 2 0.0 0.0 0.0 0.37509752763188126 0.0 3 0.0 0.0 0.0 0.47108973906951246 0.0 4 0.0 0.0 0.0 0.6660312679843228 0.0 5 0.0 0.0 0.0 1.3259208541942 0.0 6 0.0 0.0 0.0 1.6157172460698923 0.0 7 0.0 0.0 0.0 1.8916379865292445 0.0 8 0.0 0.0 0.0 2.3731913315848496 0.0 9 0.0 0.0 0.0 2.5353772243692836 0.0 10 0.0 0.0 0.0 3.214601734683897 0.0 11 0.0 0.0 0.0 3.7691728519467995 0.0 12 0.0 0.0 0.0 4.556217997857235 0.0 13 0.0 0.0 0.0 4.765945056969785 0.0 14 0.0 0.0 0.0 4.862392207798116 0.0 15 0.0 0.0 0.0 5.056423857931527 0.0 16 0.0 0.0 0.0 5.377156128374797 0.0 17 0.0 0.0 0.0 5.734965959160091 0.0 18 0.0 0.0 0.0 6.152827789517741 0.0 19 0.0 0.0 0.0 6.410550954349107 0.0 20 0.0 0.0 0.0 6.668274119180472 0.0 21 0.0 0.0 0.0 6.977177965465551 0.0 22 0.0 0.0 0.0 7.336807553813643 0.0 23 0.0 0.0 0.0 7.657084884866213 0.0 24 0.0 0.0 0.0 7.928456231418569 0.0 25 0.0 0.0 0.0 8.167071941840549 0.0 26 0.0 0.0 0.0 8.381348394860094 0.0 27 0.0 0.0 0.0 8.595624847879641 0.0 28 0.0 0.0 0.0 8.831055982566722 0.0 29 0.0 0.0 0.0 9.065349768777054 0.0 30 0.0 0.0 0.0 9.346274842534104 0.0 31 0.0 0.0 0.0 9.628109795072552 0.0 32 0.0 0.0 0.0 9.902665717359804 0.0 33 0.0 0.0 0.0 10.151972503463226 0.0 34 0.0 0.0 0.0 10.414927471287637 0.0 35 0.0 0.0 0.0 10.70381398438193 0.0 36 0.0 0.0 0.0 10.990653270218075 0.0 37 0.0 0.0 0.0 11.280904601484467 0.0 38 0.0 0.0 0.0 11.562739554022915 0.0 39 0.0 0.0 0.0 11.839570173263667 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.028529E-4 45.0 1 CGGGTAT 40 6.7993824E-9 45.0 6 CGACGCA 25 3.8868624E-5 45.0 24 TCCGATG 25 3.8868624E-5 45.0 44 CGGCCTA 20 7.028529E-4 45.0 45 GCGCGAT 20 7.028529E-4 45.0 40 CGGTTGA 25 3.8868624E-5 45.0 30 ATTCGAA 20 7.028529E-4 45.0 11 TTATCGA 20 7.028529E-4 45.0 13 TTATACG 20 7.028529E-4 45.0 1 ATATCCG 20 7.028529E-4 45.0 40 TCATGCC 20 7.028529E-4 45.0 17 GATATAC 20 7.028529E-4 45.0 26 ATCCACG 20 7.028529E-4 45.0 43 GTCCGAT 25 3.8868624E-5 45.0 43 ACCGTTT 20 7.028529E-4 45.0 23 ATCGGAT 20 7.028529E-4 45.0 39 GCTAAGC 25 3.8868624E-5 45.0 38 CGTTTTA 45 3.8380676E-10 45.0 1 CGATACT 20 7.028529E-4 45.0 10 >>END_MODULE