SRR2934631.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934631.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	703256
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGC	9376	1.3332271605219153	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCG	9253	1.3157370857838397	No Hit
GAATCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTC	6514	0.9262629824701104	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2796	0.3975792598996667	No Hit
GCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC	2154	0.30628960151068746	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCT	1661	0.23618710682880772	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTC	1281	0.182152729589225	No Hit
GAACTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCT	1230	0.17490074738075467	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGATTACCGTCGTA	1133	0.1611077616117033	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGC	716	0.10181214237774011	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTACG	20	7.031416E-4	45.0	1
CGTACTC	20	7.031416E-4	45.0	31
TACGGCT	1020	0.0	41.911766	7
ACGGCTG	1120	0.0	41.38393	8
CGGCTGT	1115	0.0	40.358746	9
CGTTTTT	2060	0.0	40.194176	1
CGTTTTA	140	0.0	40.178574	1
TGATACC	1030	0.0	39.975727	4
GCTACGA	110	0.0	38.863632	10
GTAAGCG	35	6.2448307E-6	38.57143	1
GATACCT	1070	0.0	38.481308	5
ATGATAC	3275	0.0	38.40458	3
TGATACG	2210	0.0	38.076923	4
GAATGAT	3410	0.0	38.071846	1
ATACGGC	2200	0.0	38.045456	6
AATGATA	3330	0.0	37.972973	2
TGAAACG	125	0.0	37.8	4
CGACCAC	785	0.0	37.54777	12
CTAGACG	30	1.1394713E-4	37.500004	44
ACCTGCG	30	1.1394713E-4	37.500004	14