##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934627.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 898962 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.135746561033727 31.0 31.0 33.0 28.0 34.0 2 31.178728355592337 31.0 31.0 34.0 28.0 34.0 3 30.975122418967654 31.0 31.0 34.0 28.0 34.0 4 34.937507925807765 35.0 35.0 37.0 32.0 37.0 5 35.15101973164605 35.0 35.0 37.0 33.0 37.0 6 35.10651618199657 36.0 35.0 37.0 32.0 37.0 7 30.81178848494152 35.0 35.0 37.0 0.0 37.0 8 32.89067168578872 35.0 35.0 37.0 17.0 37.0 9 36.30487718057048 39.0 35.0 39.0 32.0 39.0 10 36.02222785835219 37.0 35.0 39.0 32.0 39.0 11 36.23728700434501 37.0 35.0 39.0 32.0 39.0 12 36.294046911882816 38.0 35.0 39.0 32.0 39.0 13 36.27690046965278 38.0 35.0 39.0 32.0 39.0 14 37.34530825552137 39.0 36.0 40.0 32.0 41.0 15 37.482973696329765 39.0 36.0 41.0 32.0 41.0 16 37.393251327642325 39.0 36.0 40.0 32.0 41.0 17 37.279980688838904 39.0 36.0 40.0 32.0 41.0 18 37.17969391364707 39.0 36.0 40.0 32.0 41.0 19 36.96996758483673 39.0 35.0 40.0 31.0 41.0 20 36.95139060382975 39.0 35.0 40.0 31.0 41.0 21 36.98119275342005 39.0 35.0 40.0 31.0 41.0 22 37.05457627797393 39.0 35.0 40.0 32.0 41.0 23 37.09280481266171 39.0 35.0 40.0 32.0 41.0 24 36.99512771396344 39.0 35.0 40.0 31.0 41.0 25 36.69406382027272 38.0 35.0 40.0 31.0 41.0 26 36.61710617356462 38.0 35.0 40.0 31.0 41.0 27 36.66254858381111 39.0 35.0 40.0 31.0 41.0 28 36.6568475641907 39.0 35.0 40.0 31.0 41.0 29 36.60048033176041 39.0 35.0 40.0 31.0 41.0 30 36.35135411730418 38.0 35.0 40.0 30.0 41.0 31 36.333020750599026 38.0 35.0 40.0 30.0 41.0 32 36.146793746565486 38.0 35.0 40.0 30.0 41.0 33 36.00279322151548 38.0 35.0 40.0 30.0 41.0 34 35.86007194964859 38.0 35.0 40.0 29.0 41.0 35 35.73317782064203 38.0 35.0 40.0 28.0 41.0 36 35.71928179389118 38.0 35.0 40.0 29.0 41.0 37 35.62593747010441 38.0 34.0 40.0 28.0 41.0 38 35.47414684936627 38.0 34.0 40.0 27.0 41.0 39 35.353557769961355 38.0 34.0 40.0 27.0 41.0 40 35.26130692954764 38.0 34.0 40.0 26.0 41.0 41 35.06340090014928 38.0 34.0 40.0 26.0 41.0 42 35.099529234828616 38.0 34.0 40.0 26.0 41.0 43 35.02586316218038 38.0 34.0 40.0 26.0 41.0 44 34.83508869117938 37.0 34.0 40.0 25.0 41.0 45 34.68776210785328 37.0 33.0 40.0 24.0 41.0 46 34.55216015804895 37.0 33.0 40.0 24.0 41.0 47 34.49824797933617 37.0 33.0 40.0 24.0 41.0 48 34.40659004496297 37.0 33.0 40.0 24.0 41.0 49 34.29166972575037 36.0 33.0 40.0 24.0 41.0 50 34.11894607336016 36.0 33.0 40.0 24.0 41.0 51 32.354717996978735 35.0 30.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 5.0 8 51.0 9 70.0 10 93.0 11 52.0 12 42.0 13 35.0 14 55.0 15 65.0 16 153.0 17 252.0 18 546.0 19 1012.0 20 1545.0 21 2515.0 22 3645.0 23 5128.0 24 7096.0 25 9519.0 26 12041.0 27 13938.0 28 16419.0 29 19021.0 30 23211.0 31 28689.0 32 37102.0 33 50573.0 34 75807.0 35 80584.0 36 95498.0 37 134109.0 38 162182.0 39 117903.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.81496214522972 20.45737194675637 25.27826537717946 13.44940053083445 2 30.99574842985577 25.196615652274513 26.68099430231756 17.12664161555216 3 31.15927035848011 24.707718457509884 27.93788836458048 16.19512281942952 4 28.099407983874734 25.23732927531976 28.390855230810647 18.272407509994864 5 26.26151049766286 28.5523748501049 25.734903143848125 19.451211508384112 6 25.146780397836615 35.61540977260441 24.568335480253893 14.669474349305087 7 70.26626264513962 17.201728215430688 9.069905068289872 3.4621040711398257 8 83.06157546147668 5.535384143044979 7.8037781352270725 3.599262260251267 9 78.1069722635662 5.634275976070178 9.24822183807547 7.01052992228815 10 45.51215735481588 22.067451126966432 16.361314493827326 16.05907702439035 11 31.770642140602163 23.451158113468644 23.68487210805351 21.093327637875685 12 27.217724442189994 20.881972764143534 30.150328934927174 21.749973858739303 13 24.45431508784576 21.75920672953918 32.859119740322726 20.92735844229233 14 21.408246399736587 24.904167250673552 31.09519645991711 22.592389889672756 15 20.419216830077357 22.500951096931797 35.086355151830666 21.99347692116018 16 24.18055490665901 22.475032315047798 29.9652265613007 23.379186216992487 17 25.232212262587296 22.532876806806073 28.609996863048714 23.624914067557917 18 25.338000938860596 23.09852919255764 28.957286292412803 22.60618357616896 19 25.468818481760074 24.505040257541474 26.422918877549883 23.603222383148566 20 27.281242143716867 23.986108422825435 27.92287104460478 20.80977838885292 21 26.681328020539247 25.29372765478407 27.42084759978731 20.604096724889374 22 25.87117141770175 21.8614357447812 27.666464210945513 24.600928626571537 23 25.6383473383747 23.216776682440415 28.075491511320834 23.069384467864047 24 25.492734954313978 21.807929589904802 28.80499954391843 23.894335911862793 25 24.53140399705438 25.074029825509864 26.38476376087087 24.00980241656488 26 23.860741610880105 23.438254342230262 27.248204039770314 25.45280000711932 27 23.471626164398497 23.827703506933553 27.16800042715932 25.53266990150863 28 21.887799484294106 23.938275477717635 28.630576153385796 25.543348884602462 29 24.925413977453996 22.861144297534267 27.644216329500022 24.56922539551171 30 23.905126134363854 23.68175740465114 28.147129689575312 24.265986771409693 31 26.22713752082958 22.729325599969744 26.368077849786754 24.675459029413922 32 27.337195565552268 23.014209721879233 27.014601284592676 22.63399342797582 33 26.81192308462427 22.129745195013804 26.553068984006 24.50526273635593 34 25.27726422251441 22.683050006563125 28.727243198266443 23.31244257265602 35 23.573966419047746 24.198241972408177 28.62334559191601 23.604446016628067 36 25.68072955252836 25.096166467548127 26.733721781343373 22.48938219858014 37 23.853399810003094 24.914846233767392 27.698834878448697 23.532919077780818 38 24.063976007884648 25.33533119308714 26.653184450510697 23.947508348517513 39 24.69870806552446 23.88009726773768 28.685973378185064 22.735221288552797 40 26.053937763776446 23.232016481230573 28.384292105784226 22.329753649208754 41 22.276803691368492 24.21426044704893 29.22848796723332 24.280447894349262 42 22.76336485858134 23.577192361857342 29.282661558553087 24.37678122100823 43 23.241583070252137 23.02010541046229 28.014977273789103 25.72333424549647 44 22.979391787417043 22.475032315047798 28.681078844267056 25.864497053268103 45 24.02037016025149 22.290931096086375 27.558228267713208 26.13047047594893 46 25.22442550408137 23.42612924684247 27.8248691268374 23.52457612223876 47 21.867553912178714 23.03011695711276 30.826775770277276 24.275553360431253 48 23.201425644243027 23.696329766997938 28.61900725503414 24.483237333724897 49 23.388752806014047 22.47414239978998 30.639337369099028 23.497767425096946 50 22.695731298987056 22.9001893294711 29.691911337742866 24.71216803379898 51 22.61619512281943 22.759360239921154 28.446141216202687 26.178303421056732 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 236.0 1 623.0 2 1010.0 3 4300.0 4 7590.0 5 5337.5 6 3085.0 7 2853.5 8 2622.0 9 2531.0 10 2440.0 11 2428.0 12 2416.0 13 2349.0 14 2282.0 15 2206.0 16 2130.0 17 2024.0 18 1918.0 19 1998.5 20 2079.0 21 2239.5 22 2400.0 23 2978.0 24 3556.0 25 4105.0 26 5162.5 27 5671.0 28 6983.0 29 8295.0 30 9899.0 31 11503.0 32 13092.0 33 14681.0 34 18057.0 35 21433.0 36 22773.0 37 24113.0 38 26082.5 39 28052.0 40 30253.5 41 32455.0 42 36530.5 43 40606.0 44 44942.0 45 49278.0 46 63392.5 47 77507.0 48 69995.5 49 62484.0 50 62811.0 51 63138.0 52 59496.5 53 55855.0 54 53848.5 55 51842.0 56 52112.0 57 52382.0 58 52137.0 59 51892.0 60 51281.5 61 50671.0 62 48341.5 63 46012.0 64 41056.5 65 36101.0 66 31783.0 67 27465.0 68 22936.5 69 18408.0 70 15634.0 71 12860.0 72 10060.5 73 7261.0 74 6157.5 75 3949.0 76 2844.0 77 2062.5 78 1281.0 79 1031.0 80 781.0 81 549.5 82 318.0 83 225.5 84 133.0 85 96.5 86 60.0 87 54.0 88 48.0 89 35.0 90 22.0 91 22.5 92 23.0 93 16.0 94 9.0 95 7.5 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 898962.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.713743118312237 #Duplication Level Percentage of deduplicated Percentage of total 1 72.55664848397805 22.28486263062581 2 8.499525514107557 5.221044865356805 3 3.8973362668879843 3.5910535484063866 4 2.4727835155297946 3.037937507327167 5 1.6576359009056025 2.545610162205338 6 1.190049692301454 2.193052832842403 7 0.8995175727358745 1.9339286161592177 8 0.7088282325736572 1.7416614600219673 9 0.5662253253335998 1.5651809270441064 >10 7.378417792847522 48.9769916569161 >50 0.1475024473731111 2.7165776483307273 >100 0.02091980652947203 1.1528433252058468 >500 0.0021274379521493848 0.4201463771626464 >1k 0.0017728649601244874 1.4435044658607772 >5k 7.091459840497949E-4 1.175603976534673 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC 5551 0.6174899495195569 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCG 5244 0.5833394515007309 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGC 4894 0.5444056589711245 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3685 0.4099172156331413 No Hit GAACTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCT 1835 0.2041243122623648 No Hit GCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 1834 0.20401307285513737 TruSeq Adapter, Index 20 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCT 1007 0.11201808307803889 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2247881445489352E-4 0.0 0.0 0.07252809351229529 0.0 2 2.2247881445489352E-4 0.0 0.0 0.46776170739141365 0.0 3 2.2247881445489352E-4 0.0 0.0 0.5972443774041617 0.0 4 2.2247881445489352E-4 0.0 0.0 0.9817990081894452 0.0 5 2.2247881445489352E-4 0.0 0.0 2.1007562054903324 0.0 6 2.2247881445489352E-4 0.0 0.0 2.5114520969740655 0.0 7 2.2247881445489352E-4 0.0 0.0 2.943283475831014 0.0 8 2.2247881445489352E-4 0.0 0.0 3.5903631076730718 0.0 9 2.2247881445489352E-4 0.0 0.0 3.80783614880273 0.0 10 2.2247881445489352E-4 0.0 0.0 4.936137456310723 0.0 11 2.2247881445489352E-4 0.0 0.0 5.515361049744038 0.0 12 2.2247881445489352E-4 0.0 0.0 6.646220863618262 0.0 13 2.2247881445489352E-4 0.0 0.0 6.878266267094716 0.0 14 2.2247881445489352E-4 0.0 0.0 6.971039932722406 0.0 15 2.2247881445489352E-4 0.0 0.0 7.178390187794367 0.0 16 3.337182216823403E-4 0.0 0.0 7.481295093674705 0.0 17 3.337182216823403E-4 0.0 0.0 7.827694607780974 0.0 18 3.337182216823403E-4 0.0 0.0 8.23305100771779 0.0 19 3.337182216823403E-4 0.0 0.0 8.503140288466032 0.0 20 3.337182216823403E-4 0.0 0.0 8.746643350886911 0.0 21 3.337182216823403E-4 0.0 0.0 9.043652568184195 0.0 22 3.337182216823403E-4 0.0 0.0 9.377482029273763 0.0 23 3.337182216823403E-4 0.0 0.0 9.709865378069374 0.0 24 3.337182216823403E-4 0.0 0.0 9.988075135545218 0.0 25 3.337182216823403E-4 0.0 0.0 10.221344172501174 0.0 26 3.337182216823403E-4 0.0 0.0 10.45116478783308 0.0 27 4.4495762890978704E-4 0.0 0.0 10.689550837521496 0.0 28 4.4495762890978704E-4 0.0 0.0 10.930829111797829 0.0 29 4.4495762890978704E-4 0.0 0.0 11.17911546872949 0.0 30 4.4495762890978704E-4 0.0 0.0 11.463554633010071 0.0 31 4.4495762890978704E-4 0.0 0.0 11.717847917932016 0.0 32 4.4495762890978704E-4 0.0 0.0 11.974922188034645 0.0 33 4.4495762890978704E-4 0.0 0.0 12.227546881848175 0.0 34 4.4495762890978704E-4 0.0 0.0 12.495522613859094 0.0 35 5.561970361372339E-4 0.0 0.0 12.786302424351641 0.0 36 5.561970361372339E-4 0.0 0.0 13.04949486185178 0.0 37 5.561970361372339E-4 0.0 0.0 13.321586451930115 0.0 38 5.561970361372339E-4 0.0 0.0 13.638396283713883 0.0 39 5.561970361372339E-4 0.0 0.0 13.98835545885143 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCCG 20 7.032465E-4 45.0 1 GTAATCG 20 7.032465E-4 45.0 1 TATAGCG 75 0.0 45.0 1 CTCACGA 50 1.0804797E-9 40.5 24 TACGGCT 600 0.0 40.125 7 TCGAATG 45 1.927583E-8 40.000004 1 CGTTTTT 2080 0.0 39.69952 1 GCTATCG 30 1.1397239E-4 37.500004 20 ACGATAC 30 1.1397239E-4 37.500004 45 ATACGCG 30 1.1397239E-4 37.500004 1 CGGGATA 110 0.0 36.81818 6 ATAGCGG 215 0.0 36.627907 2 CGAGATA 235 0.0 36.38298 19 GCTACGA 130 0.0 36.346157 10 TACGAAT 125 0.0 36.000004 12 TCACGAC 50 4.8768925E-8 36.0 25 TATCGAC 25 0.0021068652 36.0 15 CTATGCG 45 8.697116E-7 35.000004 1 ACTACGG 45 8.697116E-7 35.000004 2 GTACGAG 45 8.697116E-7 35.000004 1 >>END_MODULE