SRR2934623.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934623.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	498470
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6772	1.3585571849860574	No Hit
GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	1342	0.2692238249042069	No Hit
CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	960	0.19258932332938794	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC	941	0.18877765963849377	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG	896	0.17975003510742874	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC	827	0.16590767749312896	No Hit
CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT	804	0.1612935582883624	No Hit
TGGAAAGGGGTTTTTTTTCAAATATGTGAGTAACCTTTTATAGAAAAAGTA	585	0.11735911890384577	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGGAA	20	7.0294394E-4	45.0	22
TCGCCCC	20	7.0294394E-4	45.0	27
AACGTCC	35	1.2100827E-7	45.0	21
CGGGTCG	25	3.8876162E-5	45.0	6
AACCGGC	20	7.0294394E-4	45.0	41
CAACGTC	35	1.2100827E-7	45.0	20
TTTCGCA	20	7.0294394E-4	45.0	1
CGGCATT	20	7.0294394E-4	45.0	44
GGATCGA	20	7.0294394E-4	45.0	8
ATTCGTG	20	7.0294394E-4	45.0	1
CACGACT	35	1.2100827E-7	45.0	12
CGCGAAG	25	3.8876162E-5	45.0	2
AGCGGAT	20	7.0294394E-4	45.0	4
CTACGCG	20	7.0294394E-4	45.0	1
TCGCTGG	25	3.8876162E-5	45.0	2
GTCACGT	25	3.8876162E-5	45.0	38
CATACGT	20	7.0294394E-4	45.0	30
TCCAACG	25	3.8876162E-5	45.0	32
ATACGTT	20	7.0294394E-4	45.0	31
CGACTAT	25	3.8876162E-5	45.0	37