##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934620.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 806641 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.099761851926694 31.0 31.0 33.0 28.0 34.0 2 31.15332347351548 31.0 31.0 34.0 28.0 34.0 3 30.897402933895005 31.0 31.0 34.0 27.0 34.0 4 34.87958211893519 35.0 35.0 37.0 32.0 37.0 5 35.12337706612979 35.0 35.0 37.0 33.0 37.0 6 35.082311709918045 36.0 35.0 37.0 32.0 37.0 7 31.193433014190948 35.0 35.0 37.0 0.0 37.0 8 33.07725245803275 35.0 35.0 37.0 17.0 37.0 9 36.27108713789654 39.0 35.0 39.0 32.0 39.0 10 36.047459774546546 37.0 35.0 39.0 32.0 39.0 11 36.27523396405588 37.0 35.0 39.0 32.0 39.0 12 36.31274011611113 38.0 35.0 39.0 32.0 39.0 13 36.1643841560248 38.0 35.0 39.0 32.0 39.0 14 37.17755730244309 39.0 36.0 40.0 32.0 41.0 15 37.29087413111905 39.0 36.0 41.0 32.0 41.0 16 37.35446623714887 39.0 36.0 40.0 32.0 41.0 17 37.2077045426652 39.0 36.0 40.0 32.0 41.0 18 37.12411717232325 39.0 36.0 40.0 32.0 41.0 19 36.870120660864 39.0 35.0 40.0 31.0 41.0 20 36.78990901776627 39.0 35.0 40.0 31.0 41.0 21 36.898591814698236 39.0 35.0 40.0 31.0 41.0 22 37.00771966711338 39.0 35.0 40.0 32.0 41.0 23 37.065309102810296 39.0 35.0 40.0 32.0 41.0 24 36.96164960620648 39.0 35.0 40.0 32.0 41.0 25 36.695027899648046 38.0 35.0 40.0 31.0 41.0 26 36.628519998363586 38.0 35.0 40.0 31.0 41.0 27 36.67786165096989 38.0 35.0 40.0 31.0 41.0 28 36.67867985882195 39.0 35.0 40.0 31.0 41.0 29 36.61717790194151 39.0 35.0 40.0 31.0 41.0 30 36.39756223648438 38.0 35.0 40.0 30.0 41.0 31 36.367912119517854 38.0 35.0 40.0 30.0 41.0 32 36.16905289961706 38.0 35.0 40.0 30.0 41.0 33 35.94200393979478 38.0 35.0 40.0 29.0 41.0 34 35.80720791529317 38.0 35.0 40.0 29.0 41.0 35 35.73062242063074 38.0 35.0 40.0 28.0 41.0 36 35.638898840996184 38.0 35.0 40.0 28.0 41.0 37 35.55423044452241 38.0 35.0 40.0 27.0 41.0 38 35.311494208700026 38.0 34.0 40.0 26.0 41.0 39 35.189451069310884 38.0 34.0 40.0 25.0 41.0 40 35.01197682736186 38.0 34.0 40.0 25.0 41.0 41 34.890283285873146 38.0 34.0 40.0 24.0 41.0 42 34.87886432750133 38.0 34.0 40.0 24.0 41.0 43 34.83362859066177 38.0 34.0 40.0 24.0 41.0 44 34.613498446024934 38.0 34.0 40.0 23.0 41.0 45 34.49534303364198 37.0 33.0 40.0 23.0 41.0 46 34.3075519345037 37.0 33.0 40.0 23.0 41.0 47 34.171078583905356 37.0 33.0 40.0 23.0 41.0 48 34.14398970545757 37.0 33.0 40.0 23.0 41.0 49 34.041557520631855 37.0 33.0 40.0 23.0 41.0 50 33.89487888664226 36.0 33.0 40.0 22.0 41.0 51 32.08603703506269 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 7.0 8 24.0 9 52.0 10 55.0 11 40.0 12 28.0 13 22.0 14 45.0 15 79.0 16 150.0 17 258.0 18 552.0 19 1024.0 20 1650.0 21 2484.0 22 3785.0 23 5121.0 24 7029.0 25 9587.0 26 12420.0 27 14112.0 28 15189.0 29 17389.0 30 20657.0 31 25939.0 32 33388.0 33 45253.0 34 65518.0 35 71241.0 36 81707.0 37 115393.0 38 145382.0 39 111058.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.472346434163406 18.452322656547338 22.25773299398369 12.817597915305571 2 34.01661953706792 26.230380057547286 23.159869136332023 16.593131269052776 3 30.443902553924236 26.775480046265937 26.94804752052028 15.832569879289549 4 26.315424085807688 24.508052528944102 30.98181223121562 18.194711154032586 5 27.633854465617297 27.333968890745698 25.910535169920696 19.121641473716313 6 24.392015779014457 36.596701630589074 25.27555628836124 13.73572630203523 7 67.00006570456993 16.39713329721648 13.129260724411479 3.4735402738021004 8 77.23609387571423 8.022527989526939 10.768607100308564 3.9727710344502696 9 72.15080810422481 6.249000484726167 12.171213712171834 9.428977698877196 10 40.68513750230896 24.82145093046349 19.571283879693695 14.922127687533859 11 32.91042731524929 24.843393777405314 24.608221005379097 17.637957901966303 12 27.441699591267987 22.887877010962747 29.694498543961934 19.97592485380733 13 24.046756859619087 24.369701019412602 33.7706612979008 17.812880823067513 14 21.62225822887753 26.604648164425065 31.12313904202737 20.649954564670033 15 19.923733110516327 23.768814131689314 37.32515456070297 18.982298197091396 16 23.860924500490306 24.524292715098785 29.462053131442612 22.152729652968297 17 24.51102783022435 24.127213965072443 29.92322482988095 21.438533374822256 18 26.51427338803755 22.544229713094175 30.352164097783273 20.589332801084993 19 24.67615705127808 25.2870855808222 28.32821540189502 21.708541966004706 20 26.15736120529455 25.817433034026287 30.027980229122992 17.997225531556168 21 24.53470626957965 28.089323503268492 29.475441987203727 17.90052823994813 22 23.948943830030956 22.250790624329785 30.669281625902972 23.130983919736288 23 22.131778573119888 27.01077678917883 30.398901122060494 20.458543515640788 24 22.750889181184693 24.78797879106071 29.515980467147095 22.945151560607506 25 21.6644083303477 29.10662859933973 28.151432917493658 21.077530152818913 26 21.251461306826705 25.421470021980035 29.496641008825485 23.83042766236777 27 22.793039282654863 25.69544568153615 28.60293488677119 22.9085801490378 28 19.263588138961445 26.52183561212485 31.206943361421004 23.0076328874927 29 22.993500206411525 27.02850462597364 27.8744819566573 22.10351321095754 30 22.416291758043542 26.3051345022135 29.632637071510125 21.64593666823283 31 24.1764304070832 26.77957108552628 26.13355879505257 22.910439712337954 32 25.861566669683288 26.906269331710142 26.660806976089734 20.571357022516832 33 23.167679302192674 26.19814762701127 25.580772611359947 25.053400459436105 34 21.773626681510112 27.264297252433238 28.98166594556934 21.980410120487303 35 20.79834771602237 26.981271718149706 28.31185124485366 23.90852932097426 36 22.789692068714583 29.985086302332757 25.011870212399316 22.213351416553337 37 22.61117399189974 27.38343327452981 26.80275364133487 23.20263909223558 38 21.708417995118026 29.788096563403048 25.93706493966957 22.566420501809358 39 24.242258947908674 25.542837520036795 25.750240813447373 24.464662718607162 40 23.680670831261985 26.01715013246289 29.006584093791414 21.295594942483707 41 20.92479802043288 25.847557959488793 26.16951035218889 27.058133667889432 42 21.870571914891507 24.62532898774052 30.530682174598116 22.973416922769857 43 22.60559530199928 24.929305601872457 26.83387033389079 25.631228762237473 44 22.92333268455236 24.93203296137935 28.077670239920856 24.066964114147435 45 21.815032957660225 24.800747792388435 27.208014469881892 26.17620478006945 46 23.565253935765725 26.770149298138822 26.53522446788596 23.12937229820949 47 19.96117231829277 25.56874743535228 31.839938708793625 22.630141537561318 48 22.354802198251765 26.863499375806587 27.073753999610734 23.707944426330922 49 22.8315942284114 23.994441145441407 30.33406434832844 22.839900277818757 50 21.53671831707042 25.285597930182075 28.45144246325193 24.726241289495572 51 21.719451404032277 25.020176261806675 26.230504028433966 27.029868305727085 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 153.0 1 605.0 2 1057.0 3 5577.5 4 10098.0 5 6971.5 6 3845.0 7 3646.0 8 3447.0 9 3385.5 10 3324.0 11 3321.5 12 3319.0 13 3381.0 14 3443.0 15 3338.0 16 3233.0 17 3057.5 18 2882.0 19 3074.5 20 3267.0 21 3128.0 22 2989.0 23 3396.0 24 3803.0 25 4478.0 26 5670.5 27 6188.0 28 7063.5 29 7939.0 30 9140.5 31 10342.0 32 12318.0 33 14294.0 34 17189.5 35 20085.0 36 21478.5 37 22872.0 38 25623.0 39 28374.0 40 31155.0 41 33936.0 42 37369.5 43 40803.0 44 45290.5 45 49778.0 46 71213.5 47 92649.0 48 78360.5 49 64072.0 50 65070.0 51 66068.0 52 60462.0 53 54856.0 54 51672.0 55 48488.0 56 45181.0 57 41874.0 58 39052.0 59 36230.0 60 33239.5 61 30249.0 62 27582.0 63 24915.0 64 22278.5 65 19642.0 66 17139.5 67 14637.0 68 12088.5 69 9540.0 70 8169.0 71 6798.0 72 5680.5 73 4563.0 74 3946.5 75 2704.5 76 2079.0 77 1451.5 78 824.0 79 704.0 80 584.0 81 438.5 82 293.0 83 219.0 84 145.0 85 121.0 86 97.0 87 66.5 88 36.0 89 27.5 90 19.0 91 15.0 92 11.0 93 12.0 94 13.0 95 8.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 806641.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.508131655317477 #Duplication Level Percentage of deduplicated Percentage of total 1 75.66554309314527 23.84079893549919 2 8.372034069960705 5.275743033982506 3 3.56696004032558 3.3716473967950473 4 2.053023141780484 2.58747693770532 5 1.384954161760496 2.1818659032664782 6 1.0431482634123599 1.9720591691767462 7 0.7431693027772577 1.6391113363867436 8 0.5910697113024369 1.4898801824950139 9 0.47025646627029155 1.333521238590784 >10 5.647588699892957 41.08356363376085 >50 0.42940257915867563 8.289943615750552 >100 0.027766468870908934 1.5605947798194948 >500 0.0015643081054033201 0.334052305415764 >1k 0.00195538513175415 1.0820041659372273 >5k 0.0015643081054033201 3.957737365418267 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGC 9727 1.2058648147069142 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCG 9262 1.148218352402122 No Hit GAATCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTC 7810 0.9682126249471574 RNA PCR Primer, Index 40 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5320 0.6595251171214952 No Hit GCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCTGC 2668 0.3307543256541634 Illumina PCR Primer Index 8 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCT 1805 0.22376745045193588 TruSeq Adapter, Index 19 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCT 1707 0.21161830355759254 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTC 1388 0.17207159070763822 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACAGACTCTCGTA 1213 0.15037668553916797 No Hit GAATGCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTT 932 0.11554086638293863 RNA PCR Primer, Index 40 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2397088667697278E-4 0.0 0.0 0.07388664845947578 0.0 2 1.2397088667697278E-4 0.0 0.0 0.5982834991030707 0.0 3 1.2397088667697278E-4 0.0 0.0 0.742089727648359 0.0 4 1.2397088667697278E-4 0.0 0.0 1.1650783929901902 0.0 5 1.2397088667697278E-4 0.0 0.0 2.7043009219714844 0.0 6 1.2397088667697278E-4 0.0 0.0 3.172910873610441 0.0 7 1.2397088667697278E-4 0.0 0.0 3.7222258724761077 0.0 8 1.2397088667697278E-4 0.0 0.0 4.529028402969846 0.0 9 1.2397088667697278E-4 0.0 0.0 4.802508178979249 0.0 10 1.2397088667697278E-4 0.0 0.0 6.680295199475355 0.0 11 1.2397088667697278E-4 0.0 0.0 7.357176240731627 0.0 12 1.2397088667697278E-4 0.0 0.0 9.277361304471258 0.0 13 2.4794177335394556E-4 0.0 0.0 9.592371327517446 0.0 14 2.4794177335394556E-4 0.0 0.0 9.75849231566459 0.0 15 2.4794177335394556E-4 0.0 0.0 10.09668489451937 0.0 16 2.4794177335394556E-4 0.0 0.0 10.49029245971876 0.0 17 2.4794177335394556E-4 0.0 0.0 10.927041893481734 0.0 18 2.4794177335394556E-4 0.0 0.0 11.407677021128357 0.0 19 2.4794177335394556E-4 0.0 0.0 11.751076377223573 0.0 20 2.4794177335394556E-4 0.0 0.0 12.058276234409112 0.0 21 2.4794177335394556E-4 0.0 0.0 12.411097377891776 0.0 22 2.4794177335394556E-4 0.0 0.0 12.800613903830824 0.0 23 2.4794177335394556E-4 0.0 0.0 13.185791448736179 0.0 24 2.4794177335394556E-4 0.0 0.0 13.490263946414824 0.0 25 2.4794177335394556E-4 0.0 0.0 13.762999897104164 0.0 26 2.4794177335394556E-4 0.0 0.0 14.035859818680182 0.0 27 2.4794177335394556E-4 0.0 0.0 14.365250464580898 0.0 28 2.4794177335394556E-4 0.0 0.0 14.635383026650022 0.0 29 2.4794177335394556E-4 0.0 0.0 14.950517020582886 0.0 30 2.4794177335394556E-4 0.0 0.0 15.336686332581657 0.0 31 2.4794177335394556E-4 0.0 0.0 15.648473112574242 0.0 32 2.4794177335394556E-4 0.0 0.0 15.961747543206954 0.0 33 2.4794177335394556E-4 0.0 0.0 16.274030206746247 0.0 34 2.4794177335394556E-4 0.0 0.0 16.586932724718928 0.0 35 2.4794177335394556E-4 0.0 0.0 16.941737402388423 0.0 36 2.4794177335394556E-4 0.0 0.0 17.242614744353435 0.0 37 2.4794177335394556E-4 0.0 0.0 17.555517262326116 0.0 38 2.4794177335394556E-4 0.0 0.0 17.942554370531624 0.0 39 2.4794177335394556E-4 0.0 0.0 18.5208785568797 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATA 20 7.0320343E-4 45.0 27 GACCGAA 20 7.0320343E-4 45.0 32 CCGTCTA 20 7.0320343E-4 45.0 30 TACGCTA 25 3.8897677E-5 45.0 1 TCGTCGT 20 7.0320343E-4 45.0 26 CGCACCT 20 7.0320343E-4 45.0 33 ATCGGTT 20 7.0320343E-4 45.0 11 GACGATA 20 7.0320343E-4 45.0 8 TATACGG 45 3.8380676E-10 45.0 2 CGTTTTT 3355 0.0 41.84799 1 CTAACGG 70 0.0 41.785713 2 TATAGCG 55 6.002665E-11 40.909092 1 TACGGCT 1045 0.0 40.47847 7 CTACGAA 90 0.0 40.0 11 TACGAAT 90 0.0 40.0 12 CGAATAT 90 0.0 40.0 14 ACGGCTG 1185 0.0 39.873417 8 CACGGGA 225 0.0 39.0 4 ACGGGTA 35 6.245973E-6 38.571426 5 TTACGCG 35 6.245973E-6 38.571426 1 >>END_MODULE