SRR2934619.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934619.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	821625
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTC	8409	1.0234596074851665	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7474	0.9096607333029059	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCG	5493	0.668553172067549	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGC	4698	0.5717937015061615	No Hit
GAACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCT	2616	0.3183934276586034	No Hit
GCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC	2045	0.24889700289061312	TruSeq Adapter, Index 16 (95% over 21bp)
GAATGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTT	1336	0.16260459455347634	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCT	1081	0.1315685379583143	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTC	991	0.12061463563061006	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTACGTG	20	7.03211E-4	45.000004	17
TGTAACG	20	7.03211E-4	45.000004	1
TAATCGT	40	6.8102963E-9	45.000004	21
GCGAGAC	335	0.0	41.641792	21
CGTTTTT	4085	0.0	41.640152	1
CGTTTTA	290	0.0	41.120693	1
ACACGAC	335	0.0	40.97015	26
GTATGCG	55	6.002665E-11	40.909092	1
TTAATCG	45	1.9272193E-8	40.0	20
GACACGA	345	0.0	39.782608	25
AAACACG	345	0.0	39.130436	40
CACGTGA	340	0.0	39.044117	43
AACACGT	340	0.0	39.044117	41
TACGGCT	555	0.0	38.51351	7
CTATCTC	255	0.0	37.941177	5
AGACACG	370	0.0	37.7027	24
CACGACC	365	0.0	37.60274	27
ACGACCA	365	0.0	37.60274	28
GAATCTG	1140	0.0	37.105263	1
ACACGTG	360	0.0	36.875	42