##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934619.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 821625 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.150096455195495 31.0 31.0 33.0 28.0 34.0 2 31.206438460368172 31.0 31.0 34.0 28.0 34.0 3 30.949518332572644 31.0 31.0 34.0 27.0 34.0 4 34.89195557584056 35.0 35.0 37.0 32.0 37.0 5 35.14221816522136 35.0 35.0 37.0 33.0 37.0 6 35.09254830366651 36.0 35.0 37.0 32.0 37.0 7 30.88510330138445 35.0 35.0 37.0 0.0 37.0 8 32.91081576144835 35.0 35.0 37.0 17.0 37.0 9 36.309559713981436 39.0 35.0 39.0 32.0 39.0 10 36.12944713220752 37.0 35.0 39.0 32.0 39.0 11 36.3317571884984 38.0 35.0 39.0 32.0 39.0 12 36.398802373345504 38.0 35.0 39.0 32.0 39.0 13 36.362054465236575 38.0 35.0 39.0 32.0 39.0 14 37.444261068005474 39.0 36.0 41.0 32.0 41.0 15 37.570728738779856 39.0 36.0 41.0 32.0 41.0 16 37.530290582686746 39.0 36.0 41.0 32.0 41.0 17 37.40871443785182 39.0 36.0 41.0 32.0 41.0 18 37.28760079111517 39.0 36.0 40.0 32.0 41.0 19 37.02494081849992 39.0 36.0 40.0 31.0 41.0 20 36.965811653734974 39.0 35.0 40.0 31.0 41.0 21 37.034956336528225 39.0 35.0 40.0 32.0 41.0 22 37.13004229423399 39.0 35.0 40.0 32.0 41.0 23 37.183140727217406 39.0 35.0 40.0 32.0 41.0 24 37.06847649475125 39.0 35.0 40.0 32.0 41.0 25 36.76867914194432 39.0 35.0 40.0 31.0 41.0 26 36.69034413509813 38.0 35.0 40.0 31.0 41.0 27 36.72498767685988 39.0 35.0 40.0 31.0 41.0 28 36.68466879659212 39.0 35.0 40.0 31.0 41.0 29 36.63535797961357 39.0 35.0 40.0 31.0 41.0 30 36.385002890613116 38.0 35.0 40.0 30.0 41.0 31 36.3786715350677 38.0 35.0 40.0 30.0 41.0 32 36.15313068614027 38.0 35.0 40.0 30.0 41.0 33 35.92818621633957 38.0 35.0 40.0 29.0 41.0 34 35.7436969420356 38.0 35.0 40.0 28.0 41.0 35 35.60877285866423 38.0 35.0 40.0 27.0 41.0 36 35.50653156853796 38.0 35.0 40.0 27.0 41.0 37 35.43583630001521 38.0 35.0 40.0 26.0 41.0 38 35.231016582991025 38.0 34.0 40.0 25.0 41.0 39 35.13091495511943 38.0 34.0 40.0 25.0 41.0 40 34.93866666666667 38.0 34.0 40.0 24.0 41.0 41 34.76991449870683 38.0 34.0 40.0 23.0 41.0 42 34.780404685836 38.0 34.0 40.0 24.0 41.0 43 34.70967290430549 38.0 34.0 40.0 23.0 41.0 44 34.529012627415185 37.0 34.0 40.0 23.0 41.0 45 34.41516750342309 37.0 33.0 40.0 23.0 41.0 46 34.27392180130838 37.0 33.0 40.0 23.0 41.0 47 34.1428230640499 37.0 33.0 40.0 23.0 41.0 48 34.07777514072722 37.0 33.0 40.0 23.0 41.0 49 33.954117754450024 36.0 33.0 40.0 23.0 41.0 50 33.79542126882702 36.0 33.0 40.0 22.0 41.0 51 32.068402251635476 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 29.0 9 64.0 10 68.0 11 51.0 12 41.0 13 39.0 14 46.0 15 85.0 16 169.0 17 320.0 18 583.0 19 986.0 20 1701.0 21 2664.0 22 3614.0 23 5201.0 24 7144.0 25 10284.0 26 13370.0 27 15057.0 28 15900.0 29 17604.0 30 20709.0 31 25495.0 32 32519.0 33 43882.0 34 63791.0 35 71311.0 36 84889.0 37 120239.0 38 149749.0 39 114014.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.49733759318424 18.524752776509963 22.737867031796743 15.240042598509051 2 33.525270044119885 25.30972158831584 24.1246310664841 17.040377301080177 3 30.647558192606116 25.0296668188042 28.979522288148484 15.343252700441198 4 26.568933515898372 24.353445915107258 30.62370302753689 18.453917541457475 5 25.838186520614638 28.422942339875245 26.84764947512551 18.891221664384602 6 24.75837517115472 34.79933059485775 26.37054617374106 14.071748060246463 7 67.93330290582686 16.978305187889852 11.778852883006238 3.3095390232770425 8 79.41457477559713 5.783903849079568 11.090095846645367 3.711425528677925 9 74.27622090369694 5.8076373041229274 12.170394036208734 7.745747755971398 10 41.46064202038643 24.404929256047467 18.916415639738325 15.218013083827781 11 31.10543130990415 24.169785486079416 25.710025863380498 19.014757340635935 12 25.89392971246006 21.876403468735734 31.340575079872206 20.889091738931995 13 23.64898828541001 23.079141944317662 33.573467214361784 19.698402555910544 14 20.859516202647193 26.086596683401797 31.93342461585273 21.12046249809828 15 19.553689335158982 22.909599878289974 35.827780313403316 21.708930473147724 16 23.398509052183172 23.537136771641563 30.98323444393732 22.081119732237944 17 23.655560626806633 23.38901567016583 30.638186520614635 22.317237182412903 18 25.048166742735432 22.83535676251331 30.122622851057358 21.9938536436939 19 23.9531416400426 25.311182108626195 27.565860337745324 23.169815913585882 20 26.55165069222577 24.806937471474214 29.549003499163245 19.09240833713677 21 25.488878746386735 25.235113342461585 29.113038186520612 20.162969724631065 22 24.77870074547391 21.21442263806481 29.848288452761295 24.158588163699985 23 24.562178609462954 24.779309295603223 29.8728738779857 20.785638216948122 24 24.125483036665145 23.511942796287844 29.820660276890308 22.5419138901567 25 23.668705309599876 26.662650235813175 27.860155180282973 21.808489274303973 26 23.499041533546325 23.801856077894417 28.536497794005783 24.16260459455348 27 24.356610375779706 23.849688118058726 28.61865206146356 23.175049444698008 28 21.305583447436483 25.039281910847404 29.72572645671687 23.92940818499924 29 23.877924844059027 25.555940970637458 28.143130990415337 22.42300319488818 30 25.02528525787312 23.79735280693747 29.850600943252704 21.32676099193671 31 26.303118819412752 23.568294538262588 26.813570667883766 23.315015974440893 32 26.403407880724174 24.515685379583143 28.020203864293318 21.06070287539936 33 24.59418834626502 23.84092499619656 27.75694507835083 23.807941579187585 34 23.35019017191541 25.53731933668036 28.854404381560933 22.258086109843298 35 24.443754754297885 25.967929408184997 28.201064962726303 21.387250874790812 36 23.720675490643544 29.128251939753536 25.969633348547088 21.181439221055832 37 24.714194431766316 26.302266849231703 26.737745321770877 22.245793397231097 38 23.371976266544955 26.670561387494296 27.021573102084282 22.935889243876463 39 24.9296211775445 24.955058572949948 26.150981287083525 23.96433896242203 40 24.467853339418834 23.853947968963944 30.05592575688422 21.622272934732997 41 21.88261068005477 26.780100410771336 26.97276738171307 24.364521527460823 42 23.357736193518942 25.5099345808611 29.02674577818348 22.105583447436484 43 24.23173588924388 24.36500836756428 27.577422790202345 23.825832952989504 44 23.816461280998023 24.17392362695877 27.718241290126272 24.291373801916933 45 23.427719458390385 23.509021755667124 27.457660124752774 25.605598661189717 46 24.462376388254985 24.831888026776205 26.736406511486383 23.969329073482427 47 21.815791875855773 25.478898524265936 30.407180891525936 22.29812870835235 48 22.82987981134946 25.71854556519093 28.010588772250117 23.440985851209494 49 23.426258938080025 24.06012475277651 30.272082762817586 22.24153354632588 50 22.54970333181196 24.87241746538871 29.32554389167808 23.252335311121254 51 22.531568537958314 23.92003651300776 27.75524113798874 25.793153811045183 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 264.0 1 710.5 2 1157.0 3 7450.5 4 13744.0 5 9432.5 6 5121.0 7 4710.5 8 4300.0 9 4233.0 10 4166.0 11 4105.5 12 4045.0 13 3873.5 14 3702.0 15 3500.0 16 3298.0 17 3154.5 18 3011.0 19 2992.5 20 2974.0 21 3161.0 22 3348.0 23 3413.5 24 3479.0 25 3877.0 26 5212.5 27 6150.0 28 7467.0 29 8784.0 30 10259.5 31 11735.0 32 13090.5 33 14446.0 34 16481.0 35 18516.0 36 20657.0 37 22798.0 38 24349.5 39 25901.0 40 27487.0 41 29073.0 42 31878.5 43 34684.0 44 39652.5 45 44621.0 46 60417.0 47 76213.0 48 66411.5 49 56610.0 50 57668.0 51 58726.0 52 55720.0 53 52714.0 54 50904.5 55 49095.0 56 48081.5 57 47068.0 58 45993.5 59 44919.0 60 42852.5 61 40786.0 62 36857.5 63 32929.0 64 29522.0 65 26115.0 66 22516.0 67 18917.0 68 16935.5 69 14954.0 70 12921.0 71 10888.0 72 9186.0 73 7484.0 74 6317.5 75 3981.0 76 2811.0 77 2007.0 78 1203.0 79 998.5 80 794.0 81 545.5 82 297.0 83 231.0 84 165.0 85 125.5 86 86.0 87 73.0 88 60.0 89 41.5 90 23.0 91 19.5 92 16.0 93 11.5 94 7.0 95 4.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 821625.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.737246903200734 #Duplication Level Percentage of deduplicated Percentage of total 1 71.7963562306264 24.222113969027973 2 8.974678939327859 6.055619185061193 3 4.180193903397521 4.230847014665298 4 2.5775378309117207 3.4783612081523674 5 1.7532464209672325 2.9574853693162266 6 1.296269268203822 2.62395338126542 7 1.000448541300847 2.3626665616269587 8 0.8337457760623876 2.2502629681213984 9 0.7662143428712098 2.3264966219597736 >10 6.727866978226844 42.208203191473935 >50 0.0615866297107285 1.309110215565097 >100 0.027607786607670836 1.681315749016902 >500 0.0014157839285982336 0.33483021024452186 >1k 0.001769729910747792 1.4061913537230706 >5k 0.0010618379464486752 2.5525430007799215 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTC 8409 1.0234596074851665 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7474 0.9096607333029059 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCG 5493 0.668553172067549 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGC 4698 0.5717937015061615 No Hit GAACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCT 2616 0.3183934276586034 No Hit GCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 2045 0.24889700289061312 TruSeq Adapter, Index 16 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTT 1336 0.16260459455347634 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCT 1081 0.1315685379583143 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTC 991 0.12061463563061006 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.43420051726761E-4 0.0 0.0 0.060489882854100105 0.0 2 2.43420051726761E-4 0.0 0.0 0.43085349155636693 0.0 3 2.43420051726761E-4 0.0 0.0 0.5615700593336376 0.0 4 2.43420051726761E-4 0.0 0.0 1.0375779704853187 0.0 5 2.43420051726761E-4 0.0 0.0 2.4503879507074395 0.0 6 2.43420051726761E-4 0.0 0.0 2.966195040316446 0.0 7 2.43420051726761E-4 0.0 0.0 3.407637304122927 0.0 8 2.43420051726761E-4 0.0 0.0 4.067183934276586 0.0 9 2.43420051726761E-4 0.0 0.0 4.369511638521224 0.0 10 2.43420051726761E-4 0.0 0.0 5.567503423094477 0.0 11 2.43420051726761E-4 0.0 0.0 6.036573862771946 0.0 12 2.43420051726761E-4 0.0 0.0 7.050540088239769 0.0 13 2.43420051726761E-4 0.0 0.0 7.264019473604138 0.0 14 2.43420051726761E-4 0.0 0.0 7.386703179674425 0.0 15 2.43420051726761E-4 0.0 0.0 7.577422790202343 0.0 16 2.43420051726761E-4 0.0 0.0 7.7977179370150616 0.0 17 2.43420051726761E-4 0.0 0.0 8.050509660733303 0.0 18 2.43420051726761E-4 0.0 0.0 8.31717632739997 0.0 19 2.43420051726761E-4 0.0 0.0 8.511912368781378 1.217100258633805E-4 20 2.43420051726761E-4 0.0 0.0 8.694233987524722 1.217100258633805E-4 21 2.43420051726761E-4 0.0 0.0 8.90114103149247 1.217100258633805E-4 22 2.43420051726761E-4 0.0 0.0 9.14310056290887 1.217100258633805E-4 23 2.43420051726761E-4 0.0 0.0 9.383234443937319 1.217100258633805E-4 24 2.43420051726761E-4 0.0 0.0 9.580039555758406 1.217100258633805E-4 25 2.43420051726761E-4 0.0 0.0 9.74726913129469 1.217100258633805E-4 26 2.43420051726761E-4 0.0 0.0 9.904883614787769 1.217100258633805E-4 27 2.43420051726761E-4 0.0 0.0 10.110086718393427 1.217100258633805E-4 28 2.43420051726761E-4 0.0 0.0 10.288635326335006 1.217100258633805E-4 29 2.43420051726761E-4 0.0 0.0 10.47205233531112 1.217100258633805E-4 30 2.43420051726761E-4 0.0 0.0 10.730199300167351 1.217100258633805E-4 31 3.651300775901415E-4 0.0 0.0 10.931629392971246 1.217100258633805E-4 32 3.651300775901415E-4 0.0 0.0 11.159957401490948 1.217100258633805E-4 33 3.651300775901415E-4 0.0 0.0 11.365038795070744 1.217100258633805E-4 34 3.651300775901415E-4 0.0 0.0 11.576083979917845 1.217100258633805E-4 35 3.651300775901415E-4 0.0 0.0 11.805385668644455 1.217100258633805E-4 36 3.651300775901415E-4 0.0 0.0 12.013631522896699 1.217100258633805E-4 37 3.651300775901415E-4 0.0 0.0 12.237943100562909 1.217100258633805E-4 38 3.651300775901415E-4 0.0 0.0 12.49146508443633 1.217100258633805E-4 39 3.651300775901415E-4 0.0 0.0 12.875460216035297 1.217100258633805E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGTG 20 7.03211E-4 45.000004 17 TGTAACG 20 7.03211E-4 45.000004 1 TAATCGT 40 6.8102963E-9 45.000004 21 GCGAGAC 335 0.0 41.641792 21 CGTTTTT 4085 0.0 41.640152 1 CGTTTTA 290 0.0 41.120693 1 ACACGAC 335 0.0 40.97015 26 GTATGCG 55 6.002665E-11 40.909092 1 TTAATCG 45 1.9272193E-8 40.0 20 GACACGA 345 0.0 39.782608 25 AAACACG 345 0.0 39.130436 40 CACGTGA 340 0.0 39.044117 43 AACACGT 340 0.0 39.044117 41 TACGGCT 555 0.0 38.51351 7 CTATCTC 255 0.0 37.941177 5 AGACACG 370 0.0 37.7027 24 CACGACC 365 0.0 37.60274 27 ACGACCA 365 0.0 37.60274 28 GAATCTG 1140 0.0 37.105263 1 ACACGTG 360 0.0 36.875 42 >>END_MODULE