SRR2934617.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934617.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	540246
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1872	0.3465088126520141	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1019	0.188617777827138	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	839	0.15529962276444434	No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	680	0.1258685857923983	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCACGT	25	3.8880513E-5	45.0	45
CGAACCG	20	7.0299633E-4	45.0	30
CAACGCT	20	7.0299633E-4	45.0	30
CGCATAG	45	3.8380676E-10	45.0	2
CCAATCG	20	7.0299633E-4	45.0	21
TGACGTT	20	7.0299633E-4	45.0	28
TAGCACG	25	3.8880513E-5	45.0	1
TATAGCG	40	6.8030204E-9	45.0	1
ACCGTGT	20	7.0299633E-4	45.0	37
CGATCTA	25	3.8880513E-5	45.0	10
CACGACC	60	0.0	44.999996	27
AGGCGAT	205	0.0	42.804874	7
CGAATAT	175	0.0	42.42857	14
TATCGCG	70	0.0	41.785713	32
AATAGGC	65	0.0	41.53846	4
TACGAAT	185	0.0	41.351353	12
CGTTTTA	420	0.0	41.25	1
GCGATAC	55	6.002665E-11	40.909092	9
ATGGGCG	50	1.0786607E-9	40.5	5
TACGGGT	50	1.0786607E-9	40.5	4