##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934617.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 540246 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00037760575738 33.0 31.0 34.0 30.0 34.0 2 32.19765255087497 33.0 31.0 34.0 30.0 34.0 3 32.04368565431304 33.0 31.0 34.0 30.0 34.0 4 35.81898061253577 37.0 35.0 37.0 35.0 37.0 5 32.152286180739885 37.0 35.0 37.0 10.0 37.0 6 34.007640963561045 37.0 35.0 37.0 19.0 37.0 7 20.649898379627057 32.0 0.0 37.0 0.0 37.0 8 28.03622979161345 35.0 17.0 37.0 17.0 37.0 9 34.83351103016034 37.0 32.0 39.0 32.0 39.0 10 36.26656560159631 37.0 35.0 39.0 32.0 39.0 11 36.73424328916827 39.0 37.0 39.0 33.0 39.0 12 37.07859382577566 39.0 37.0 39.0 34.0 39.0 13 36.82994598756863 39.0 37.0 39.0 33.0 39.0 14 38.239564938935224 40.0 38.0 41.0 34.0 41.0 15 38.425831935821826 40.0 38.0 41.0 34.0 41.0 16 38.50505695553507 40.0 38.0 41.0 34.0 41.0 17 38.478226585666526 40.0 38.0 41.0 34.0 41.0 18 38.38560211459224 40.0 38.0 41.0 34.0 41.0 19 38.32303802341896 40.0 37.0 41.0 34.0 41.0 20 38.29351443601619 40.0 37.0 41.0 34.0 41.0 21 38.21241064255913 40.0 37.0 41.0 34.0 41.0 22 38.167673615353 40.0 37.0 41.0 34.0 41.0 23 38.11004431314623 40.0 37.0 41.0 34.0 41.0 24 37.98802582527219 40.0 36.0 41.0 33.0 41.0 25 37.84918907312595 40.0 36.0 41.0 33.0 41.0 26 37.72634688641841 40.0 36.0 41.0 33.0 41.0 27 37.68559322975089 40.0 36.0 41.0 33.0 41.0 28 37.62679038808247 40.0 36.0 41.0 33.0 41.0 29 37.63438692743676 40.0 36.0 41.0 33.0 41.0 30 37.49030626788537 40.0 36.0 41.0 33.0 41.0 31 37.35238206298612 40.0 36.0 41.0 32.0 41.0 32 37.26429071200897 40.0 36.0 41.0 32.0 41.0 33 37.119795426527915 40.0 35.0 41.0 32.0 41.0 34 36.97765462400462 40.0 35.0 41.0 31.0 41.0 35 36.866747740843984 40.0 35.0 41.0 31.0 41.0 36 36.68666126172151 39.0 35.0 41.0 30.0 41.0 37 36.62926888861741 39.0 35.0 41.0 30.0 41.0 38 36.52193445208294 39.0 35.0 41.0 30.0 41.0 39 36.462896532320464 39.0 35.0 41.0 30.0 41.0 40 36.340837322256895 39.0 35.0 41.0 30.0 41.0 41 36.246458095015974 39.0 35.0 40.0 30.0 41.0 42 36.1633478082207 39.0 35.0 40.0 29.0 41.0 43 36.063633974152516 39.0 35.0 40.0 29.0 41.0 44 35.94123047648664 39.0 35.0 40.0 29.0 41.0 45 35.84381004209194 39.0 35.0 40.0 28.0 41.0 46 35.692838077468416 38.0 35.0 40.0 27.0 41.0 47 35.65179011043117 38.0 35.0 40.0 27.0 41.0 48 35.541190494700565 38.0 35.0 40.0 27.0 41.0 49 35.40254809845885 38.0 34.0 40.0 27.0 41.0 50 35.27470078445745 38.0 34.0 40.0 26.0 41.0 51 33.37366310902811 36.0 32.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 14.0 9 24.0 10 42.0 11 20.0 12 16.0 13 8.0 14 14.0 15 17.0 16 46.0 17 87.0 18 153.0 19 282.0 20 564.0 21 954.0 22 1553.0 23 2319.0 24 3387.0 25 4712.0 26 5661.0 27 6386.0 28 7100.0 29 8403.0 30 10276.0 31 13366.0 32 17737.0 33 25816.0 34 36485.0 35 47061.0 36 61519.0 37 104642.0 38 110057.0 39 71513.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.61639697471152 21.26253595584234 25.790658329723865 13.330408739722275 2 32.14091358381182 24.837573994069366 25.701254613638973 17.32025780847984 3 31.5326721530562 23.993514065814463 28.19956094075662 16.274252840372718 4 28.292481573209244 26.127912099302907 26.775950215272303 18.803656112215545 5 23.036542612069315 37.45515931631146 22.4273756770064 17.080922394612823 6 26.985299289582894 34.821359158605524 24.522347227003994 13.670994324807587 7 49.44839943285096 43.27972812385469 4.787078479063242 2.4847939642311094 8 85.52326162525961 4.944784413026658 7.021986280324148 2.5099676813895893 9 78.93755807539529 8.827830284722145 8.285484760646076 3.949126879236496 10 37.65303213721157 35.624326695616446 14.731992462692922 11.99064870447907 11 32.150723929469166 25.453959862729203 24.781118231324246 17.61419797647738 12 31.600233967488883 22.330382825601667 27.43250297086883 18.636880236040618 13 25.37047937421101 26.26229532472244 27.51283674474221 20.85438855632434 14 19.584226444989874 28.76060165184009 28.12274408325096 23.532427819919075 15 19.820230043350623 27.667581064922274 31.91897765092199 20.593211240805115 16 22.966204284714742 25.65627510430434 31.36460057085106 20.012920040129867 17 22.31113233600989 25.4302669524624 28.711735024414804 23.54686568711291 18 23.18517860382122 26.423703275915045 29.099706430033724 21.291411690230007 19 24.312998152693403 27.788822129178186 26.74152145504085 21.156658263087557 20 26.660632378583088 25.747159627280908 28.836863206761365 18.75534478737464 21 26.10033207094546 26.450913102549578 27.10894666503778 20.339808161467182 22 25.039333933060128 25.29144130636784 27.306264183353505 22.362960577218526 23 23.538351047485776 27.066743668625033 28.24990837507358 21.144996908815614 24 21.99442476205284 25.501345683262812 31.00698570651148 21.49724384817287 25 22.18970617089252 27.763278210296793 27.980956823373056 22.066058795437634 26 21.830240297938346 29.193552566793645 26.946798310399338 22.02940882486867 27 21.266423073932987 28.5425528370409 28.714696638198156 21.476327450827956 28 19.88057292418639 29.01437493290094 29.48434602014638 21.620706122766293 29 21.019683625607595 26.27747359536211 30.243814854714334 22.45902792431596 30 22.04273608689375 27.467301932823197 29.08212184819508 21.407840132087973 31 23.110027654068702 28.52126623797307 27.222783694835318 21.14592241312291 32 23.271065403538387 28.26379093968303 27.439351702742826 21.025791954035753 33 22.857735179899528 28.68489539950319 26.76132724721701 21.696042173380274 34 21.280490739403902 28.203633159708723 28.245651055260012 22.270225045627363 35 22.836078379108777 26.353364948560472 27.96985077168549 22.84070590064526 36 22.610255328128297 29.485086423592215 26.753923212758636 21.150735035520853 37 22.06365248423866 28.757825138918196 28.373000447944086 20.805521928899058 38 21.24939379467872 27.729219651788263 28.673789347815624 22.347597205717395 39 22.0133050499217 27.311632108335832 28.248797769904822 22.426265071837644 40 23.522987675984645 27.295528333388862 28.007796448284672 21.17368754234182 41 20.34776749850994 26.911258944999126 30.032059469204768 22.70891408728616 42 21.542408458368964 27.321257353131724 27.998541405211704 23.137792783287615 43 22.23376017591986 27.482850405185786 28.393916845288995 21.889472573605357 44 21.51575393431881 27.851941522935846 27.5667010954269 23.065603447318445 45 21.342499527992803 28.62899493934245 26.16567267504063 23.86283285762412 46 21.02597705489721 29.692399388426754 26.16548757417917 23.116135982496864 47 21.43856687509024 28.26971416724973 29.13320968595788 21.15850927170215 48 21.54648067732107 26.857394594314442 29.19262706248635 22.403497665878135 49 20.875119852807796 27.460268100087738 29.056948131036602 22.607663916067867 50 20.333329631316104 27.548561211003875 28.904795222916967 23.213313934763054 51 20.341659170081776 26.843326928843524 28.018717399110777 24.796296501963923 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 433.0 1 989.0 2 1545.0 3 3631.0 4 5717.0 5 4045.0 6 2373.0 7 2122.0 8 1871.0 9 1831.5 10 1792.0 11 1813.0 12 1834.0 13 1819.0 14 1804.0 15 1795.0 16 1786.0 17 1803.0 18 1820.0 19 1778.5 20 1737.0 21 2019.5 22 2302.0 23 2688.0 24 3074.0 25 3805.5 26 5485.0 27 6433.0 28 7628.0 29 8823.0 30 10586.5 31 12350.0 32 14310.0 33 16270.0 34 17598.0 35 18926.0 36 20091.5 37 21257.0 38 23242.0 39 25227.0 40 27382.0 41 29537.0 42 31501.0 43 33465.0 44 35397.5 45 37330.0 46 38253.0 47 39176.0 48 38470.5 49 37765.0 50 36527.0 51 35289.0 52 33204.5 53 31120.0 54 29470.0 55 27820.0 56 27083.0 57 26346.0 58 25398.5 59 24451.0 60 23636.5 61 22822.0 62 20486.0 63 18150.0 64 15152.5 65 12155.0 66 10121.5 67 8088.0 68 6716.0 69 5344.0 70 4367.0 71 3390.0 72 2953.0 73 2516.0 74 2092.0 75 1314.0 76 960.0 77 712.5 78 465.0 79 358.0 80 251.0 81 184.0 82 117.0 83 85.0 84 53.0 85 34.0 86 15.0 87 16.0 88 17.0 89 15.0 90 13.0 91 10.0 92 7.0 93 5.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 540246.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.362425903532085 #Duplication Level Percentage of deduplicated Percentage of total 1 72.41681592262269 24.16000655388222 2 7.043242109084483 4.699592859699362 3 3.3041722091349515 3.307056014993242 4 2.326415493995836 3.1045945815706024 5 1.7465143471080173 2.9133977747423474 6 1.445171739716405 2.892866105050027 7 1.2044837571897777 2.812915007087633 8 1.0783531295081557 2.8781181104846225 9 0.9342937891527754 2.8053276581465725 >10 8.427600882993426 47.35955216373433 >50 0.05105563364544871 1.1075452267895871 >100 0.019636782171326087 1.1335632741993658 >500 0.0011221018383614908 0.28432671953580524 >1k 0.0011221018383614908 0.5411379500842745 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1872 0.3465088126520141 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1019 0.188617777827138 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 839 0.15529962276444434 No Hit GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 680 0.1258685857923983 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01962069131469738 0.0 2 0.0 0.0 0.0 0.10421178500164739 0.0 3 0.0 0.0 0.0 0.1423425624622857 0.0 4 0.0 0.0 0.0 0.18473065973649042 0.0 5 0.0 0.0 0.0 0.3265179196143979 0.0 6 0.0 0.0 0.0 0.44646327784009504 0.0 7 0.0 0.0 0.0 0.5619662153907664 0.0 8 0.0 0.0 0.0 0.8394324067184209 0.0 9 0.0 0.0 0.0 0.9479015115336347 0.0 10 0.0 0.0 0.0 1.2744194311480326 0.0 11 0.0 0.0 0.0 1.7634559071237919 0.0 12 0.0 0.0 0.0 2.130881117120719 0.0 13 0.0 0.0 0.0 2.291918866590405 0.0 14 0.0 0.0 0.0 2.355778663793901 0.0 15 0.0 0.0 0.0 2.491827796966567 0.0 16 0.0 0.0 0.0 2.7533753142087125 0.0 17 0.0 0.0 0.0 3.0715636950574368 0.0 18 0.0 0.0 0.0 3.4008581275937257 0.0 19 0.0 0.0 0.0 3.604098873476157 0.0 20 0.0 0.0 0.0 3.8114118383106956 0.0 21 0.0 0.0 0.0 4.079252784842461 0.0 22 0.0 0.0 0.0 4.387445719172377 0.0 23 0.0 0.0 0.0 4.713593437063856 0.0 24 0.0 0.0 0.0 4.952373548346494 0.0 25 0.0 0.0 0.0 5.178751901911352 0.0 26 0.0 0.0 0.0 5.3755141176427035 0.0 27 0.0 0.0 0.0 5.577459157494919 0.0 28 0.0 0.0 0.0 5.801801401583723 0.0 29 0.0 0.0 0.0 6.040026210281983 0.0 30 0.0 0.0 0.0 6.2982419120178585 0.0 31 0.0 0.0 0.0 6.5479429741266015 0.0 32 0.0 0.0 0.0 6.78320616904151 0.0 33 0.0 0.0 0.0 7.022541582908527 0.0 34 0.0 0.0 0.0 7.262062097637003 0.0 35 0.0 0.0 0.0 7.526756329523957 0.0 36 0.0 0.0 0.0 7.783121022645239 0.0 37 0.0 0.0 0.0 8.037634707151927 0.0 38 0.0 0.0 0.0 8.294184501134668 0.0 39 0.0 0.0 0.0 8.576648415721726 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACGT 25 3.8880513E-5 45.0 45 CGAACCG 20 7.0299633E-4 45.0 30 CAACGCT 20 7.0299633E-4 45.0 30 CGCATAG 45 3.8380676E-10 45.0 2 CCAATCG 20 7.0299633E-4 45.0 21 TGACGTT 20 7.0299633E-4 45.0 28 TAGCACG 25 3.8880513E-5 45.0 1 TATAGCG 40 6.8030204E-9 45.0 1 ACCGTGT 20 7.0299633E-4 45.0 37 CGATCTA 25 3.8880513E-5 45.0 10 CACGACC 60 0.0 44.999996 27 AGGCGAT 205 0.0 42.804874 7 CGAATAT 175 0.0 42.42857 14 TATCGCG 70 0.0 41.785713 32 AATAGGC 65 0.0 41.53846 4 TACGAAT 185 0.0 41.351353 12 CGTTTTA 420 0.0 41.25 1 GCGATAC 55 6.002665E-11 40.909092 9 ATGGGCG 50 1.0786607E-9 40.5 5 TACGGGT 50 1.0786607E-9 40.5 4 >>END_MODULE