SRR2934616.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934616.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	268494
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	652	0.24283596653928952	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	401	0.14935156837769187	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGGCT	50	2.1827873E-11	45.000004	5
CGCGCAA	25	3.882793E-5	45.000004	18
TTGACGG	50	2.1827873E-11	45.000004	2
CGGTAAG	25	3.882793E-5	45.000004	2
TCAAGCG	25	3.882793E-5	45.000004	17
ACGACCA	25	3.882793E-5	45.000004	28
CTTCGTC	20	7.0236175E-4	45.0	37
CGAAATA	20	7.0236175E-4	45.0	38
CGCATAG	20	7.0236175E-4	45.0	2
TAGCGAA	20	7.0236175E-4	45.0	1
TCGATCA	20	7.0236175E-4	45.0	17
CCTCGAT	20	7.0236175E-4	45.0	15
CCCACGA	20	7.0236175E-4	45.0	39
CGAATAT	20	7.0236175E-4	45.0	14
CCCCACG	20	7.0236175E-4	45.0	38
TAGGCCG	20	7.0236175E-4	45.0	6
CGCAATC	20	7.0236175E-4	45.0	20
CTTACGT	20	7.0236175E-4	45.0	10
GTTGCGC	20	7.0236175E-4	45.0	41
CGTTTTA	160	0.0	43.59375	1