SRR2934615.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934615.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	290259
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	648	0.2232488915072401	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	402	0.13849699750912114	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTAA	30	2.1598753E-6	45.000004	1
GTACATC	25	3.8835773E-5	45.000004	36
GACCGTC	25	3.8835773E-5	45.000004	26
GATCAAT	25	3.8835773E-5	45.000004	9
ACGGGTG	20	7.0245634E-4	45.000004	5
CCCCGTG	20	7.0245634E-4	45.000004	13
CCGTAGG	30	2.1598753E-6	45.000004	3
ATATAGC	25	3.8835773E-5	45.000004	12
TACGAAT	45	3.8198777E-10	45.000004	12
AGACCTA	40	6.7848305E-9	45.000004	32
AGACCGT	25	3.8835773E-5	45.000004	25
TCGTCCC	30	2.1598753E-6	45.000004	38
AAATTCG	20	7.0245634E-4	45.000004	30
CGAATAT	45	3.8198777E-10	45.000004	14
AATTCGC	20	7.0245634E-4	45.000004	12
CGTACAT	25	3.8835773E-5	45.000004	35
GCTACGA	45	3.8198777E-10	45.000004	10
CACCGTT	20	7.0245634E-4	45.000004	31
AGGATAC	20	7.0245634E-4	45.000004	7
TATACGA	20	7.0245634E-4	45.000004	33