##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934615.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 290259 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.025242972655455 33.0 31.0 34.0 30.0 34.0 2 32.225998160263764 33.0 31.0 34.0 30.0 34.0 3 32.110897508776645 33.0 31.0 34.0 30.0 34.0 4 35.87036749937125 37.0 35.0 37.0 35.0 37.0 5 32.188135423880055 37.0 35.0 37.0 10.0 37.0 6 34.03329440258528 37.0 35.0 37.0 19.0 37.0 7 20.609686521348177 32.0 0.0 37.0 0.0 37.0 8 28.027640831119793 35.0 17.0 37.0 17.0 37.0 9 34.87766787593149 37.0 32.0 39.0 32.0 39.0 10 36.32815175412304 37.0 35.0 39.0 32.0 39.0 11 36.75966636693436 39.0 37.0 39.0 33.0 39.0 12 36.977967952759435 39.0 37.0 39.0 33.0 39.0 13 36.638271336978356 39.0 35.0 39.0 33.0 39.0 14 37.99644110949187 40.0 37.0 41.0 33.0 41.0 15 38.23593066881647 40.0 37.0 41.0 33.0 41.0 16 38.33434622182258 40.0 37.0 41.0 34.0 41.0 17 38.31743374021133 40.0 37.0 41.0 34.0 41.0 18 38.23218918276436 40.0 37.0 41.0 34.0 41.0 19 38.17625982312349 40.0 37.0 41.0 34.0 41.0 20 38.174602682431896 40.0 37.0 41.0 34.0 41.0 21 38.04254820694621 40.0 36.0 41.0 34.0 41.0 22 38.00743129412008 40.0 36.0 41.0 34.0 41.0 23 37.95854047591978 40.0 36.0 41.0 34.0 41.0 24 37.8391092093613 40.0 36.0 41.0 33.0 41.0 25 37.69898263275213 40.0 35.0 41.0 33.0 41.0 26 37.55001223045625 39.0 35.0 41.0 33.0 41.0 27 37.49936091559607 39.0 35.0 41.0 33.0 41.0 28 37.416204148708566 39.0 35.0 41.0 33.0 41.0 29 37.419542546484344 39.0 35.0 41.0 33.0 41.0 30 37.281717362769115 39.0 35.0 41.0 33.0 41.0 31 37.09540789432886 39.0 35.0 41.0 32.0 41.0 32 37.00464412817518 39.0 35.0 41.0 32.0 41.0 33 36.86866212589446 39.0 35.0 41.0 31.0 41.0 34 36.723257504504595 39.0 35.0 41.0 31.0 41.0 35 36.60176945417713 39.0 35.0 41.0 31.0 41.0 36 36.444995676275326 39.0 35.0 41.0 30.0 41.0 37 36.354331820891 39.0 35.0 41.0 30.0 41.0 38 36.24401655073572 39.0 35.0 40.0 30.0 41.0 39 36.130545478348644 39.0 35.0 40.0 30.0 41.0 40 36.025611608942356 39.0 35.0 40.0 29.0 41.0 41 35.904640338456346 39.0 35.0 40.0 29.0 41.0 42 35.81831054334233 38.0 35.0 40.0 29.0 41.0 43 35.74033535566511 38.0 35.0 40.0 28.0 41.0 44 35.531132540248535 38.0 35.0 40.0 27.0 41.0 45 35.42347007327938 38.0 34.0 40.0 27.0 41.0 46 35.268343100472336 38.0 34.0 40.0 26.0 41.0 47 35.22865785384777 38.0 34.0 40.0 26.0 41.0 48 35.13077286147889 38.0 34.0 40.0 26.0 41.0 49 35.01930000447876 38.0 34.0 40.0 26.0 41.0 50 34.85399246879511 37.0 34.0 40.0 26.0 41.0 51 32.970343727498545 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 10.0 10 13.0 11 7.0 12 5.0 13 4.0 14 7.0 15 16.0 16 31.0 17 55.0 18 111.0 19 186.0 20 321.0 21 565.0 22 901.0 23 1354.0 24 1924.0 25 2612.0 26 3116.0 27 3603.0 28 3963.0 29 4837.0 30 6000.0 31 7774.0 32 10212.0 33 15624.0 34 22149.0 35 28083.0 36 32801.0 37 54675.0 38 55279.0 39 34007.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.750767418064555 21.159378348302724 26.655159702197 14.434694531435719 2 31.74130690176704 26.18592360615864 26.895290068525007 15.177479423549311 3 32.41243165586597 23.546556695916408 27.692509103938207 16.34850254427942 4 28.329870908395606 26.075332720087925 27.33317485418196 18.261621517334518 5 23.230976472736415 36.76165080152553 23.24751342766288 16.759859298075167 6 27.519560116998953 34.36896013560303 24.16979318470745 13.941686562690563 7 49.79277128357777 43.33302326542846 4.493228461477508 2.3809769895162596 8 86.74907582538354 4.124936694469422 6.8462993395553635 2.2796881405916785 9 81.19851580829534 7.19667607205978 8.023868338277195 3.580939781367675 10 41.92600401710197 33.353315487202806 13.389076652231283 11.33160384346394 11 36.55356078536755 23.156215655673037 22.804116323697112 17.4861072352623 12 32.80105009663783 22.08096906555869 26.168353091549275 18.949627746254208 13 24.837128219969063 28.152443162830437 27.859256732780036 19.151171884420464 14 20.391788023799435 29.326222442714954 29.322088203983338 20.959901329502273 15 19.38131117381373 24.40923451124685 35.83075804712343 20.378696267815986 16 22.935722923320206 22.634612535700875 34.114359933714375 20.315304607264547 17 23.228220313582007 22.28044608435914 28.83907131217292 25.65226228988593 18 24.11673712098505 23.560337491688458 30.12998735611988 22.192938031206612 19 25.826933876296685 25.447272952776657 27.28184138993106 21.443951780995594 20 28.082850144181577 24.158079508301206 27.62946196328107 20.129608384236146 21 25.37147857603037 25.124802331710644 29.171533010173672 20.33218608208531 22 25.60402950468375 23.148291698104106 27.808956828212043 23.438721969000103 23 22.93916812226322 25.367344337298757 27.880272446332416 23.813215094105608 24 22.8278881964039 23.77635146541537 31.8894504563166 21.506309881864127 25 22.81720807968056 25.179580994904548 29.770653106363625 22.23255781905126 26 21.12389279918969 28.525558208358742 27.498888923340882 22.85166006911069 27 21.75643132512687 27.56538126294103 29.142248819158063 21.53593859277404 28 20.027975015417265 27.170905983966044 32.31010924725848 20.49100975335821 29 20.95473353108775 24.96287798138904 31.063636269676394 23.01875221784682 30 22.411019124299333 26.036746491926177 29.825431769557532 21.726802614216957 31 25.2202343424321 26.42364233322653 26.72888695957748 21.62723636476388 32 26.368519150138326 26.469807999062905 26.578676285662116 20.582996565136654 33 23.801501417699363 27.181241580795085 27.086498609862225 21.930758391643327 34 21.87563520855512 27.816191745992374 28.356398940256806 21.951774105195703 35 22.81720807968056 26.523208582679608 28.29197372002246 22.367609617617372 36 24.801298150961728 27.34867824942551 26.669974057651956 21.1800495419608 37 22.9877454273597 28.11936925297751 28.294040839388266 20.598844480274515 38 22.368298657405973 28.233060818096938 26.65205902314829 22.746581501348796 39 22.579489352612665 27.36245904519756 28.289217560868053 21.768834041321718 40 24.19356505741424 25.523756369311545 27.732817931571457 22.549860641702754 41 21.20347689477329 25.87757830075898 29.014431938372283 23.904512866095455 42 23.027020695310053 25.22988089947254 27.285286588874076 24.457811816343337 43 22.60429478500236 25.18268167395326 27.37348368181521 24.83953985922917 44 22.04307187718555 27.532651872982406 27.534029952559614 22.890246297272434 45 22.378978774129312 27.976393496842476 26.73129859883759 22.913329130190625 46 22.347627463747894 28.76568857468674 26.77160742647084 22.11507653509452 47 22.106808057631287 27.708357019076068 28.318501751883662 21.866333171408982 48 22.376222614974903 25.352874501738103 29.708984045283692 22.5619188380033 49 22.28802552203377 25.694293716990686 29.064731842940272 22.952948918035272 50 21.802252471068943 27.943664106883855 28.080093985027165 22.17398943702004 51 20.985051281786266 27.59535449374524 27.20122373466456 24.218370489803934 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 386.0 1 653.0 2 920.0 3 1658.5 4 2397.0 5 1716.5 6 1036.0 7 984.5 8 933.0 9 968.5 10 1004.0 11 957.5 12 911.0 13 969.5 14 1028.0 15 1036.0 16 1044.0 17 1033.0 18 1022.0 19 1128.5 20 1235.0 21 1288.5 22 1342.0 23 1477.5 24 1613.0 25 2009.0 26 2885.0 27 3365.0 28 3693.5 29 4022.0 30 4555.5 31 5089.0 32 6074.0 33 7059.0 34 7895.0 35 8731.0 36 9174.0 37 9617.0 38 10606.0 39 11595.0 40 13061.0 41 14527.0 42 16474.5 43 18422.0 44 19617.0 45 20812.0 46 21003.5 47 21195.0 48 20968.0 49 20741.0 50 20111.5 51 19482.0 52 18631.5 53 17781.0 54 17128.5 55 16476.0 56 15917.0 57 15358.0 58 14428.5 59 13499.0 60 12745.0 61 11991.0 62 10972.5 63 9954.0 64 8663.0 65 7372.0 66 6301.5 67 5231.0 68 4514.0 69 3797.0 70 3283.0 71 2769.0 72 2263.5 73 1758.0 74 1372.0 75 764.0 76 542.0 77 436.5 78 331.0 79 283.0 80 235.0 81 193.5 82 152.0 83 96.0 84 40.0 85 28.0 86 16.0 87 23.0 88 30.0 89 18.0 90 6.0 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 290259.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.81345281283268 #Duplication Level Percentage of deduplicated Percentage of total 1 67.36907311746671 22.106119017842683 2 7.831464449204149 5.139547783186741 3 4.288984082986855 4.222091304662388 4 3.0406114820881105 3.9909184555862174 5 2.3476544454243835 3.851732418288494 6 1.8415858216790557 3.6257273676268436 7 1.7155936331947417 3.940618551018229 8 1.4741086052664734 3.8696474527921616 9 1.396413422367813 4.123903134786518 >10 8.65041367435219 43.640679531039524 >50 0.03464785183318635 0.7441629716908003 >100 0.008399479232287599 0.5216031199721628 >500 0.0010499349040359498 0.2232488915072401 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 648 0.2232488915072401 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 402 0.13849699750912114 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02687255175550112 0.0 2 0.0 0.0 0.0 0.12264908237126153 0.0 3 0.0 0.0 0.0 0.16502502937032099 0.0 4 0.0 0.0 0.0 0.20567837689787397 0.0 5 0.0 0.0 0.0 0.33349525768365496 0.0 6 0.0 0.0 0.0 0.4327169872424283 0.0 7 0.0 0.0 0.0 0.5222921597607654 0.0 8 0.0 0.0 0.0 0.7393396931705821 0.0 9 0.0 0.0 0.0 0.8151340699168673 0.0 10 0.0 0.0 0.0 1.0184008075546322 0.0 11 0.0 0.0 0.0 1.3157214763366512 0.0 12 0.0 0.0 0.0 1.5975387498751115 0.0 13 0.0 0.0 0.0 1.7070960762629237 0.0 14 0.0 0.0 0.0 1.7539507818879 0.0 15 0.0 0.0 0.0 1.8511053920808658 0.0 16 0.0 0.0 0.0 2.089857678831664 0.0 17 0.0 0.0 0.0 2.3423907613545145 0.0 18 0.0 0.0 0.0 2.653492225908585 0.0 19 0.0 0.0 0.0 2.8216179343276178 0.0 20 0.0 0.0 0.0 3.0111038761933306 0.0 21 0.0 0.0 0.0 3.2305630488632566 0.0 22 0.0 0.0 0.0 3.4603578183622212 0.0 23 0.0 0.0 0.0 3.7104792616249624 0.0 24 0.0 0.0 0.0 3.895486444864759 0.0 25 0.0 0.0 0.0 4.065679272649599 0.0 26 0.0 0.0 0.0 4.226914583182606 0.0 27 0.0 0.0 0.0 4.36885677963474 0.0 28 0.0 0.0 0.0 4.529058530484843 0.0 29 0.0 0.0 0.0 4.713721193830338 0.0 30 0.0 0.0 0.0 4.922844769671225 0.0 31 0.0 0.0 0.0 5.129901226146304 0.0 32 0.0 0.0 0.0 5.3090515711829775 0.0 33 0.0 0.0 0.0 5.500604632414499 0.0 34 0.0 0.0 0.0 5.690435094174513 0.0 35 0.0 0.0 0.0 5.906793587795727 0.0 36 0.0 0.0 0.0 6.099724728604453 0.0 37 0.0 0.0 0.0 6.296445588250494 0.0 38 0.0 0.0 0.0 6.523139678700747 0.0 39 0.0 0.0 0.0 6.752934448199711 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAA 30 2.1598753E-6 45.000004 1 GTACATC 25 3.8835773E-5 45.000004 36 GACCGTC 25 3.8835773E-5 45.000004 26 GATCAAT 25 3.8835773E-5 45.000004 9 ACGGGTG 20 7.0245634E-4 45.000004 5 CCCCGTG 20 7.0245634E-4 45.000004 13 CCGTAGG 30 2.1598753E-6 45.000004 3 ATATAGC 25 3.8835773E-5 45.000004 12 TACGAAT 45 3.8198777E-10 45.000004 12 AGACCTA 40 6.7848305E-9 45.000004 32 AGACCGT 25 3.8835773E-5 45.000004 25 TCGTCCC 30 2.1598753E-6 45.000004 38 AAATTCG 20 7.0245634E-4 45.000004 30 CGAATAT 45 3.8198777E-10 45.000004 14 AATTCGC 20 7.0245634E-4 45.000004 12 CGTACAT 25 3.8835773E-5 45.000004 35 GCTACGA 45 3.8198777E-10 45.000004 10 CACCGTT 20 7.0245634E-4 45.000004 31 AGGATAC 20 7.0245634E-4 45.000004 7 TATACGA 20 7.0245634E-4 45.000004 33 >>END_MODULE