SRR2934614.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934614.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	556576
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10744	1.9303742885068704	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6010	1.079816592882194	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2278	0.40928821939860865	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1304	0.23428965675846603	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	572	0.10277122980509401	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGATAG	30	2.163475E-6	45.000004	2
TCGCAAG	20	7.0301467E-4	45.0	2
CGAACGG	20	7.0301467E-4	45.0	2
TTGTGCG	25	3.8882034E-5	45.0	1
CACGACC	40	6.8048394E-9	45.0	27
AAGCGCG	20	7.0301467E-4	45.0	1
AAGCGAT	20	7.0301467E-4	45.0	6
CGTTCTA	20	7.0301467E-4	45.0	1
ATCGTAG	20	7.0301467E-4	45.0	1
GCTTACG	20	7.0301467E-4	45.0	1
ACTACGG	20	7.0301467E-4	45.0	2
GCCTACG	20	7.0301467E-4	45.0	1
TATCGAC	25	3.8882034E-5	45.0	30
AACACGT	40	6.8048394E-9	45.0	41
CGTTATT	1100	0.0	44.590908	1
CGTTTTA	2465	0.0	44.361053	1
CGTTTTT	5030	0.0	43.747513	1
CGGTTTT	625	0.0	42.84	1
CGGTTTA	235	0.0	41.17021	1
TAGGCGA	55	6.002665E-11	40.909092	6