##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934614.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 556576 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6554163312827 31.0 31.0 34.0 30.0 34.0 2 31.826065083654342 31.0 31.0 34.0 30.0 34.0 3 30.896427442074398 31.0 31.0 34.0 26.0 34.0 4 35.11990096590583 37.0 35.0 37.0 32.0 37.0 5 31.59231803024205 35.0 35.0 37.0 0.0 37.0 6 33.68814142183637 37.0 35.0 37.0 17.0 37.0 7 21.47971705571207 32.0 0.0 37.0 0.0 37.0 8 28.55014948542517 35.0 17.0 37.0 17.0 37.0 9 35.112990858391306 37.0 32.0 39.0 32.0 39.0 10 36.39193569251998 37.0 35.0 39.0 32.0 39.0 11 36.74669407232795 39.0 37.0 39.0 33.0 39.0 12 37.175384853101825 39.0 37.0 39.0 34.0 39.0 13 37.06649945380325 39.0 37.0 39.0 34.0 39.0 14 38.53763008106709 40.0 38.0 41.0 34.0 41.0 15 38.68570150347841 40.0 38.0 41.0 35.0 41.0 16 38.70851420111539 40.0 38.0 41.0 35.0 41.0 17 38.67260356177773 40.0 38.0 41.0 35.0 41.0 18 38.45500165296384 40.0 38.0 41.0 34.0 41.0 19 38.251455326855634 40.0 37.0 41.0 34.0 41.0 20 38.03148536767665 40.0 36.0 41.0 34.0 41.0 21 37.922612545276834 40.0 36.0 41.0 33.0 41.0 22 37.794428793192665 39.0 35.0 41.0 33.0 41.0 23 37.6414254297706 39.0 35.0 41.0 33.0 41.0 24 37.43304059104237 39.0 35.0 41.0 33.0 41.0 25 37.277149931006726 39.0 35.0 41.0 33.0 41.0 26 37.18098336974645 39.0 35.0 41.0 33.0 41.0 27 37.1083104553556 39.0 35.0 41.0 33.0 41.0 28 37.038424222388315 39.0 35.0 41.0 33.0 41.0 29 36.998091904789284 39.0 35.0 41.0 33.0 41.0 30 36.815847251767956 39.0 35.0 41.0 32.0 41.0 31 36.57225428333238 39.0 35.0 41.0 31.0 41.0 32 36.26018369458978 39.0 35.0 40.0 30.0 41.0 33 35.76497369631461 39.0 35.0 40.0 26.0 41.0 34 35.236551701834074 39.0 34.0 40.0 23.0 41.0 35 34.712872994883 39.0 34.0 40.0 20.0 41.0 36 34.31896991605819 38.0 34.0 40.0 16.0 41.0 37 34.127039254297706 38.0 34.0 40.0 15.0 41.0 38 33.95507352095671 38.0 33.0 40.0 15.0 41.0 39 33.85734562755131 38.0 33.0 40.0 13.0 41.0 40 33.78699584603001 38.0 33.0 40.0 12.0 41.0 41 33.67270956706721 38.0 33.0 40.0 10.0 41.0 42 33.50876609843041 38.0 33.0 40.0 10.0 41.0 43 33.39665562295176 38.0 33.0 40.0 10.0 41.0 44 33.26618826539412 38.0 33.0 40.0 10.0 41.0 45 33.185025944345426 38.0 33.0 40.0 10.0 41.0 46 33.05183478985799 38.0 33.0 40.0 10.0 41.0 47 33.01578760133387 38.0 33.0 40.0 10.0 41.0 48 32.91607794802507 38.0 32.0 40.0 10.0 41.0 49 32.81083984936469 38.0 32.0 40.0 10.0 41.0 50 32.64866253665268 38.0 31.0 40.0 10.0 41.0 51 31.1797328666705 35.0 28.0 39.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 11.0 10 22.0 11 15.0 12 17.0 13 9.0 14 15.0 15 20.0 16 44.0 17 86.0 18 206.0 19 442.0 20 941.0 21 1795.0 22 3475.0 23 5973.0 24 9956.0 25 14642.0 26 16880.0 27 15832.0 28 13832.0 29 12487.0 30 12537.0 31 14204.0 32 17322.0 33 23665.0 34 32274.0 35 43200.0 36 54266.0 37 92972.0 38 100826.0 39 68595.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.312431725406775 18.697536365204392 23.026504915770712 24.96352699361812 2 41.773091186109355 20.94466883228885 22.859950842292875 14.422289139308916 3 27.489507273040882 20.743438452250906 38.03954895647674 13.727505318231472 4 22.878636520439258 22.29956016788363 39.45822313574426 15.363580175932848 5 18.910984304030357 34.20305582705686 33.37729258897257 13.508667279940207 6 21.9421965733341 30.10711924337377 36.12193123670442 11.828752946587707 7 43.41958690277698 40.33249726901627 14.32688437877307 1.9210314494336804 8 75.55949232449835 3.037321048697752 19.648529580865866 1.7546570459380213 9 70.57724371873742 6.30839274420744 20.672468809291093 2.4418947277640433 10 31.98467055712068 32.14242080147186 27.227189099062844 8.64571954234462 11 21.090560857816364 23.68373771057322 41.240369688955326 13.985331742655092 12 20.205326855631576 22.337111194158567 41.89059535445294 15.566966595756915 13 18.396768815040534 24.045054044730637 42.7451057896855 14.813071350543321 14 15.944273558328062 26.78609929281895 41.128614960041396 16.14101218881159 15 15.733340999252574 25.78767320186282 43.485885126200195 14.993100672684415 16 19.23564796182372 24.966761053297304 41.62594147070661 14.171649514172369 17 19.531744092450985 24.654853964238487 39.78648019318117 16.026921750129365 18 19.485568907031563 24.262814063128847 40.882467084459265 15.369149945380325 19 18.94835566032312 26.282304662795376 39.297957511642615 15.47138216523889 20 19.115808083711837 26.16659719427356 39.98753090323694 14.73006381877767 21 19.029027482320473 25.509903409417582 40.99458115333755 14.466487954924395 22 19.23205456218019 23.462024952567127 40.629312079572244 16.676608405680447 23 17.107996032886792 25.27327804289082 40.94535157822112 16.673374346001264 24 16.85699706778589 25.359339964353477 41.8345383200138 15.949124647846835 25 16.59270252400391 26.872879894210318 40.2604496061634 16.273967975622377 26 17.29772753406543 27.45968205599954 39.123497958949 16.119092450986027 27 16.409439142183636 27.29222963261082 40.49941068245846 15.798920542747084 28 15.689681193583628 26.394059391709305 41.67301500603691 16.243244408670154 29 16.081900764675446 25.402820100040245 41.529638360259874 16.985640775024436 30 17.412356982694188 25.953149255447595 40.5191743804979 16.11531938136032 31 17.623109871787502 26.68548410279998 39.09582878169379 16.595577243718736 32 17.67162076697522 26.87665296383603 38.81212987983672 16.639596389352036 33 17.438768470074166 27.292768642557352 38.687618582188236 16.580844305180246 34 16.960666647501867 27.70241620192031 38.23395187719198 17.102965273385845 35 17.31479618237222 27.203113321451163 37.67643592249756 17.805654573679067 36 18.179547806588857 28.66922037601334 36.07988846087507 17.07134335652274 37 17.464281607543263 29.083539354912897 36.5569122635543 16.895266773989537 38 17.593464324728338 29.57835048582763 35.36911401138389 17.45907117806014 39 18.281600356465244 28.7374949692405 34.93790605415972 18.042998620134536 40 19.54144627148853 27.91837952049675 34.52700080492152 18.013173403093198 41 18.037428850687057 27.77410452480883 34.64522365319381 19.5432429713103 42 18.786652676364053 28.47966854481688 33.90731903639395 18.826359742425115 43 18.961291899039846 29.084617374805955 33.52731702409015 18.426773702064047 44 17.933938940953258 29.745443569252 33.43550566319784 18.885111826596905 45 17.96178778819065 29.707353533030528 33.37531621916863 18.95554245961019 46 18.376286437072388 29.934456390501925 32.77396078882309 18.9152963836026 47 17.592386304835276 29.19565342379118 34.07854452940838 19.13341574196516 48 18.23452682113494 28.383904444316677 34.34068303340425 19.040885701144138 49 18.571228367734147 28.091401713332946 33.78694014833554 19.550429770597365 50 17.434097050537574 28.812956361754726 34.4738184901972 19.279128097510494 51 17.72390473178865 28.322097970447878 33.57474989938481 20.37924739837866 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 710.0 1 966.5 2 1223.0 3 15348.0 4 29473.0 5 20977.5 6 12482.0 7 10802.0 8 9122.0 9 8768.5 10 8415.0 11 8322.5 12 8230.0 13 7980.0 14 7730.0 15 7296.0 16 6862.0 17 6503.5 18 6145.0 19 5903.5 20 5662.0 21 5554.5 22 5447.0 23 5745.0 24 6043.0 25 6684.5 26 8658.0 27 9990.0 28 11407.5 29 12825.0 30 14329.5 31 15834.0 32 17944.0 33 20054.0 34 22076.5 35 24099.0 36 25100.0 37 26101.0 38 27424.5 39 28748.0 40 30774.0 41 32800.0 42 35073.5 43 37347.0 44 38266.0 45 39185.0 46 39371.0 47 39557.0 48 37800.0 49 36043.0 50 33766.5 51 31490.0 52 28445.5 53 25401.0 54 21923.5 55 18446.0 56 16232.0 57 14018.0 58 12043.0 59 10068.0 60 8688.5 61 7309.0 62 6206.0 63 5103.0 64 4070.5 65 3038.0 66 2417.0 67 1796.0 68 1413.0 69 1030.0 70 782.0 71 534.0 72 469.0 73 404.0 74 321.0 75 173.0 76 108.0 77 73.0 78 38.0 79 38.0 80 38.0 81 38.0 82 38.0 83 25.0 84 12.0 85 8.0 86 4.0 87 4.0 88 4.0 89 4.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 556576.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.418359178193924 #Duplication Level Percentage of deduplicated Percentage of total 1 78.73728972386658 35.761185053960894 2 7.545739452008965 6.854302093928226 3 3.063467544789174 4.174130078399237 4 1.849100550729476 3.3593245187851015 5 1.2937425399835931 2.937983168254187 6 1.0571614154408593 2.88087221254925 7 0.849069929907181 2.6994354130749794 8 0.6855773773837825 2.491023965636867 9 0.624696065345634 2.5535403245765256 >10 4.248269714307104 30.265886662274106 >50 0.03233848363484664 0.9882378846961338 >100 0.010925163389406014 0.7814204763693023 >500 8.740130711524811E-4 0.21634450577661662 >1k 8.740130711524811E-4 0.710959651093432 >5k 4.3700653557624057E-4 1.1928719997407946 >10k+ 4.3700653557624057E-4 2.1324819908843753 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10744 1.9303742885068704 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6010 1.079816592882194 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2278 0.40928821939860865 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1304 0.23428965675846603 No Hit CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 572 0.10277122980509401 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7966998217673776E-4 0.0 0.0 0.025513137469096763 0.0 2 1.7966998217673776E-4 0.0 0.0 0.10151353992985684 0.0 3 1.7966998217673776E-4 0.0 0.0 0.16152331397688727 0.0 4 1.7966998217673776E-4 0.0 0.0 0.21758034841602944 0.0 5 1.7966998217673776E-4 0.0 0.0 0.36329270396136376 0.0 6 1.7966998217673776E-4 0.0 0.0 0.550868165353878 0.0 7 1.7966998217673776E-4 0.0 0.0 0.7332331972632669 0.0 8 1.7966998217673776E-4 0.0 0.0 1.136053297303513 0.0 9 1.7966998217673776E-4 0.0 0.0 1.3419550968780545 0.0 10 1.7966998217673776E-4 0.0 0.0 1.671110504225838 0.0 11 1.7966998217673776E-4 0.0 0.0 2.049136146725694 0.0 12 1.7966998217673776E-4 0.0 0.0 2.3256482492956936 0.0 13 1.7966998217673776E-4 0.0 0.0 2.465072155464842 0.0 14 1.7966998217673776E-4 0.0 0.0 2.5274176392801704 0.0 15 1.7966998217673776E-4 0.0 0.0 2.623002069798195 0.0 16 1.7966998217673776E-4 0.0 0.0 2.8145302707985973 0.0 17 1.7966998217673776E-4 0.0 0.0 3.0836759040993504 0.0 18 1.7966998217673776E-4 0.0 0.0 3.367554475938596 0.0 19 1.7966998217673776E-4 0.0 0.0 3.5624964066003564 0.0 20 1.7966998217673776E-4 0.0 0.0 3.7455801184384523 0.0 21 1.7966998217673776E-4 0.0 0.0 3.976096705571207 0.0 22 1.7966998217673776E-4 0.0 0.0 4.225658310814696 0.0 23 1.7966998217673776E-4 0.0 0.0 4.528941240729029 0.0 24 1.7966998217673776E-4 0.0 0.0 4.747240269073766 0.0 25 1.7966998217673776E-4 0.0 0.0 4.9549387684700745 0.0 26 1.7966998217673776E-4 0.0 0.0 5.1437719197378255 0.0 27 3.593399643534755E-4 0.0 0.0 5.337276490542172 0.0 28 3.593399643534755E-4 0.0 0.0 5.552700799172081 0.0 29 3.593399643534755E-4 0.0 0.0 5.7871701259127235 0.0 30 3.593399643534755E-4 0.0 0.0 6.0636822284827225 0.0 31 3.593399643534755E-4 0.0 0.0 6.338397631230955 0.0 32 3.593399643534755E-4 0.0 0.0 6.589216926349681 0.0 33 3.593399643534755E-4 0.0 0.0 6.851535100327718 0.0 34 3.593399643534755E-4 0.0 0.0 7.101635715517737 0.0 35 3.593399643534755E-4 0.0 0.0 7.376171448283793 0.0 36 3.593399643534755E-4 0.0 0.0 7.647113781406313 0.0 37 3.593399643534755E-4 0.0 0.0 7.9265006036911405 0.0 38 3.593399643534755E-4 0.0 0.0 8.218284654746162 0.0 39 3.593399643534755E-4 0.0 0.0 8.506654976139826 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 30 2.163475E-6 45.000004 2 TCGCAAG 20 7.0301467E-4 45.0 2 CGAACGG 20 7.0301467E-4 45.0 2 TTGTGCG 25 3.8882034E-5 45.0 1 CACGACC 40 6.8048394E-9 45.0 27 AAGCGCG 20 7.0301467E-4 45.0 1 AAGCGAT 20 7.0301467E-4 45.0 6 CGTTCTA 20 7.0301467E-4 45.0 1 ATCGTAG 20 7.0301467E-4 45.0 1 GCTTACG 20 7.0301467E-4 45.0 1 ACTACGG 20 7.0301467E-4 45.0 2 GCCTACG 20 7.0301467E-4 45.0 1 TATCGAC 25 3.8882034E-5 45.0 30 AACACGT 40 6.8048394E-9 45.0 41 CGTTATT 1100 0.0 44.590908 1 CGTTTTA 2465 0.0 44.361053 1 CGTTTTT 5030 0.0 43.747513 1 CGGTTTT 625 0.0 42.84 1 CGGTTTA 235 0.0 41.17021 1 TAGGCGA 55 6.002665E-11 40.909092 6 >>END_MODULE