##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934613.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 446485 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0507654232505 33.0 31.0 34.0 30.0 34.0 2 32.24676304915059 33.0 31.0 34.0 30.0 34.0 3 32.1585338813174 33.0 31.0 34.0 30.0 34.0 4 35.89166937299125 37.0 35.0 37.0 35.0 37.0 5 32.20610546826881 37.0 35.0 37.0 10.0 37.0 6 34.03412432668511 37.0 35.0 37.0 19.0 37.0 7 20.626294276403463 32.0 0.0 37.0 0.0 37.0 8 28.017577298229504 35.0 17.0 37.0 17.0 37.0 9 34.83289248239023 37.0 32.0 39.0 32.0 39.0 10 36.29086979405803 37.0 35.0 39.0 32.0 39.0 11 36.744793218137225 38.0 37.0 39.0 33.0 39.0 12 37.05105658644747 39.0 37.0 39.0 34.0 39.0 13 36.801713383428336 39.0 37.0 39.0 33.0 39.0 14 38.17681669037034 40.0 37.0 41.0 33.0 41.0 15 38.38952708377661 40.0 38.0 41.0 34.0 41.0 16 38.459253950300685 40.0 38.0 41.0 34.0 41.0 17 38.426907958834 40.0 38.0 41.0 34.0 41.0 18 38.339258877677864 40.0 37.0 41.0 34.0 41.0 19 38.28919672553389 40.0 37.0 41.0 34.0 41.0 20 38.27295205885976 40.0 37.0 41.0 34.0 41.0 21 38.19319574005846 40.0 37.0 41.0 34.0 41.0 22 38.16569649596291 40.0 37.0 41.0 34.0 41.0 23 38.096542996965184 40.0 37.0 41.0 34.0 41.0 24 37.987058915753046 40.0 36.0 41.0 34.0 41.0 25 37.86365051457496 40.0 36.0 41.0 33.0 41.0 26 37.719361232740184 40.0 36.0 41.0 33.0 41.0 27 37.67447282663471 40.0 36.0 41.0 33.0 41.0 28 37.59285082365589 40.0 36.0 41.0 33.0 41.0 29 37.56515672419006 40.0 36.0 41.0 33.0 41.0 30 37.460696327984145 40.0 36.0 41.0 33.0 41.0 31 37.35948800071671 40.0 36.0 41.0 33.0 41.0 32 37.25707918519099 40.0 35.0 41.0 32.0 41.0 33 37.12427517161831 40.0 35.0 41.0 32.0 41.0 34 36.9844742824507 40.0 35.0 41.0 31.0 41.0 35 36.87999148907578 40.0 35.0 41.0 31.0 41.0 36 36.74250646718255 39.0 35.0 41.0 31.0 41.0 37 36.669200533052624 39.0 35.0 41.0 30.0 41.0 38 36.58283704939696 39.0 35.0 41.0 30.0 41.0 39 36.51563210410204 39.0 35.0 41.0 30.0 41.0 40 36.40539099857778 39.0 35.0 41.0 30.0 41.0 41 36.279989249358884 39.0 35.0 40.0 30.0 41.0 42 36.17315475323919 39.0 35.0 40.0 29.0 41.0 43 36.0860297658376 39.0 35.0 40.0 29.0 41.0 44 35.94540018141707 39.0 35.0 40.0 29.0 41.0 45 35.88922808157049 38.0 35.0 40.0 29.0 41.0 46 35.75734235192672 38.0 35.0 40.0 28.0 41.0 47 35.71728053574028 38.0 35.0 40.0 28.0 41.0 48 35.59329652731895 38.0 35.0 40.0 28.0 41.0 49 35.48310693528338 38.0 34.0 40.0 27.0 41.0 50 35.32934813039632 38.0 34.0 40.0 27.0 41.0 51 33.53148258060181 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 9.0 9 19.0 10 36.0 11 24.0 12 11.0 13 16.0 14 21.0 15 31.0 16 58.0 17 107.0 18 164.0 19 260.0 20 493.0 21 755.0 22 1204.0 23 1753.0 24 2492.0 25 3501.0 26 4372.0 27 5097.0 28 5865.0 29 6778.0 30 8436.0 31 11030.0 32 14436.0 33 22011.0 34 31208.0 35 40109.0 36 50714.0 37 86380.0 38 90999.0 39 58084.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.0829031210455 21.147854911139234 24.55894374951006 13.210298218305205 2 31.183130452310827 25.18628845313952 26.954992888898843 16.675588205650808 3 32.250355555057844 24.422097046933267 26.880634287826016 16.446913110182873 4 29.230769230769234 25.51507889402779 26.67749196501562 18.576659910187352 5 23.84469803016899 37.7647625340157 22.218887532615877 16.171651903199436 6 28.233423295295474 34.93017682564924 23.495078222112724 13.341321656942561 7 49.66370650749745 43.507396665061535 4.318622126163254 2.5102747012777584 8 86.05619449701558 4.571038220768895 6.794405187184339 2.578362095031188 9 79.52674781907567 8.197363853208953 8.000044794337995 4.275843533377381 10 41.43543456107148 32.88553926783654 14.205628408569156 11.473397762522817 11 34.03899347122524 26.24612249011725 23.059453285104762 16.65543075355275 12 32.41519871888193 22.357973952092454 26.854429600098545 18.372397728927066 13 25.968173622854074 25.41070808649787 27.651544844731625 20.96957344591644 14 20.199334804080767 27.633403137843377 29.50804618296247 22.659215875113386 15 20.42196266391928 26.795301073944255 32.81095669507374 19.971779567062722 16 23.653426206927445 24.556704032610277 32.03892627971825 19.750943480744034 17 23.452299629326852 24.840476163812895 28.2435020213445 23.46372218551575 18 23.69262125267366 25.8973985688209 28.546087774505303 21.863892404000136 19 26.61858741055131 26.15429409722611 26.518920008510925 20.70819848371166 20 27.847520073462718 25.842973448156155 27.038310357570804 19.27119612081033 21 26.18766587903289 25.608251117058806 28.13711546860477 20.066967535303537 22 26.49719475458302 23.393619046552516 28.012587208976786 22.096598989887678 23 24.509893949404795 26.54579661130833 28.103295743418034 20.841013695868842 24 23.341209671097573 25.02010145917556 30.193847497676295 21.444841372050572 25 23.249605249896412 26.560354771156923 28.50734067213904 21.68269930680762 26 21.898608015946785 28.79156074672161 27.584801281118065 21.725029956213536 27 22.10309416889705 28.753261587735313 28.586626650391388 20.557017592976248 28 21.925036675364236 27.76621835000056 30.13449499983202 20.174249974803185 29 21.930635967613693 25.911508785289538 30.104258821684937 22.05359642541183 30 22.31205975564689 26.234475962238374 28.85427281991556 22.59919146219918 31 23.999014524564092 26.789253838314835 27.208976785334333 22.002754851786737 32 24.84338779578261 27.619516893064716 26.51264880119153 21.02444650996114 33 24.361624690639104 27.941812154943612 26.587007402264355 21.10955575215293 34 22.7761290972821 28.455155268374078 28.017290614466333 20.751425019877487 35 23.252068938486175 26.807171573513106 27.704402163566527 22.23635732443419 36 24.145044066430003 28.72011377761851 26.559010941017053 20.575831214934432 37 23.471785166354973 29.181943402353944 27.543142546782086 19.803128884508997 38 23.1129825190096 27.760395086061123 27.156119466499433 21.97050292842985 39 23.326203567869022 27.06809859233793 27.73441437002363 21.87128346976942 40 23.81938922920143 26.687346719374673 27.836545460653774 21.656718590770126 41 20.976292596615785 27.0331590087013 28.919000638319314 23.071547756363593 42 22.283167407639674 27.522313179614095 27.167094079308374 23.027425333437854 43 23.205034883590713 27.1471605989003 26.75319439622832 22.89461012128067 44 21.739140172682173 28.107327233837644 27.588384828157718 22.565147765322465 45 22.396721054458716 27.265865594588846 26.808739375342956 23.528673975609482 46 21.962439947590624 28.812838057269563 26.742219783419372 22.48250221172044 47 22.170733619270525 28.48270378624142 27.782792255058958 21.563770339429098 48 22.838169255406115 26.24612249011725 28.588418423911214 22.327289830565416 49 21.82402544318398 26.93595529525068 28.24596570993426 22.994053551631076 50 20.912460664971945 27.372476119018557 28.62134226233804 23.093720953671458 51 20.86654646852638 27.67103038175975 27.053764404179308 24.408658745534563 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 325.0 1 910.0 2 1495.0 3 2453.0 4 3411.0 5 2545.5 6 1680.0 7 1497.0 8 1314.0 9 1297.5 10 1281.0 11 1315.0 12 1349.0 13 1300.5 14 1252.0 15 1241.5 16 1231.0 17 1300.0 18 1369.0 19 1591.0 20 1813.0 21 1821.0 22 1829.0 23 2185.5 24 2542.0 25 3173.0 26 4611.5 27 5419.0 28 6487.5 29 7556.0 30 8839.0 31 10122.0 32 11402.5 33 12683.0 34 14085.5 35 15488.0 36 16350.5 37 17213.0 38 18440.5 39 19668.0 40 21183.5 41 22699.0 42 24892.5 43 27086.0 44 27915.5 45 28745.0 46 28698.0 47 28651.0 48 29330.5 49 30010.0 50 29336.0 51 28662.0 52 27064.0 53 25466.0 54 24751.5 55 24037.0 56 23873.5 57 23710.0 58 23691.0 59 23672.0 60 22563.5 61 21455.0 62 18918.5 63 16382.0 64 13811.0 65 11240.0 66 9489.0 67 7738.0 68 6489.0 69 5240.0 70 4393.0 71 3546.0 72 2895.0 73 2244.0 74 1784.5 75 999.0 76 673.0 77 529.5 78 386.0 79 352.0 80 318.0 81 252.5 82 187.0 83 140.5 84 94.0 85 60.5 86 27.0 87 20.5 88 14.0 89 14.0 90 14.0 91 13.5 92 13.0 93 8.5 94 4.0 95 2.0 96 0.0 97 1.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 446485.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.919759745935323 #Duplication Level Percentage of deduplicated Percentage of total 1 66.55056501775636 19.24626351269762 2 7.164882776322125 4.1441337699805185 3 4.2533912655981 3.690211605196705 4 2.908101026924953 3.364063320623098 5 2.2775298841697245 3.293280853218817 6 1.8601896773293145 3.227774313013964 7 1.6102219138360845 3.2597061620045817 8 1.4506335876749066 3.356157986795401 9 1.3161839101275847 3.4257350216119926 >10 10.539194145776904 50.89486763608285 >50 0.05202421607218714 0.9961321571487235 >100 0.015529616737966311 0.7872947121197981 >500 0.001552961673796631 0.3143789495059091 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 892 0.19978274746072097 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 508 0.11377761850902045 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2397168997838674E-4 0.0 0.0 0.011870499568854496 0.0 2 2.2397168997838674E-4 0.0 0.0 0.06696753530353763 0.0 3 2.2397168997838674E-4 0.0 0.0 0.09093250613122501 0.0 4 2.2397168997838674E-4 0.0 0.0 0.11915293906850175 0.0 5 2.2397168997838674E-4 0.0 0.0 0.19821494563087225 0.0 6 2.2397168997838674E-4 0.0 0.0 0.26025510375488536 0.0 7 2.2397168997838674E-4 0.0 0.0 0.3256548372285743 0.0 8 2.2397168997838674E-4 0.0 0.0 0.49005005767271015 0.0 9 2.2397168997838674E-4 0.0 0.0 0.5444751783374582 0.0 10 2.2397168997838674E-4 0.0 0.0 0.7010313896323505 0.0 11 2.2397168997838674E-4 0.0 0.0 0.9194037873612775 0.0 12 4.4794337995677347E-4 0.0 0.0 1.101492771313706 0.0 13 4.4794337995677347E-4 0.0 0.0 1.1769712308364222 0.0 14 4.4794337995677347E-4 0.0 0.0 1.2047437203937423 0.0 15 4.4794337995677347E-4 0.0 0.0 1.2708153689373662 0.0 16 4.4794337995677347E-4 0.0 0.0 1.4036305810945497 0.0 17 4.4794337995677347E-4 0.0 0.0 1.5395813969114305 0.0 18 4.4794337995677347E-4 0.0 0.0 1.707336192705242 0.0 19 4.4794337995677347E-4 0.0 0.0 1.8143946605149108 0.0 20 4.4794337995677347E-4 0.0 0.0 1.926828448884061 0.0 21 4.4794337995677347E-4 0.0 0.0 2.0708422455401636 0.0 22 4.4794337995677347E-4 0.0 0.0 2.2262785983851643 0.0 23 4.4794337995677347E-4 0.0 0.0 2.366932819691591 0.0 24 4.4794337995677347E-4 0.0 0.0 2.4892213624197903 0.0 25 4.4794337995677347E-4 0.0 0.0 2.5949360000895885 0.0 26 4.4794337995677347E-4 0.0 0.0 2.7044581564890198 0.0 27 4.4794337995677347E-4 0.0 0.0 2.8142042845784294 0.0 28 4.4794337995677347E-4 0.0 0.0 2.92932573322732 0.0 29 4.4794337995677347E-4 0.0 0.0 3.0471348421559514 0.0 30 4.4794337995677347E-4 0.0 0.0 3.177262394033394 0.0 31 4.4794337995677347E-4 0.0 0.0 3.32777136969887 0.0 32 4.4794337995677347E-4 0.0 0.0 3.4679776476253403 0.0 33 4.4794337995677347E-4 0.0 0.0 3.602584633302351 0.0 34 4.4794337995677347E-4 0.0 0.0 3.7488381468582372 0.0 35 4.4794337995677347E-4 0.0 0.0 3.892180028444405 0.0 36 4.4794337995677347E-4 0.0 0.0 4.042689004109881 0.0 37 4.4794337995677347E-4 0.0 0.0 4.197005498504989 0.0 38 4.4794337995677347E-4 0.0 0.0 4.35512951162973 0.0 39 4.4794337995677347E-4 0.0 0.0 4.515269269964277 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCT 25 3.8869606E-5 45.0 9 CCGATGT 20 7.028647E-4 45.0 11 CTAACGG 25 3.8869606E-5 45.0 2 CATACGG 25 3.8869606E-5 45.0 2 TACTCGT 20 7.028647E-4 45.0 31 ATGCGAT 20 7.028647E-4 45.0 14 AGTACGG 65 0.0 44.999996 2 AGGCGAT 180 0.0 42.5 7 CGTTTTA 205 0.0 41.70732 1 TTTCGAC 45 1.9237632E-8 40.0 24 ATAGCGG 40 3.4518962E-7 39.375 2 ACACGCG 120 0.0 39.374996 36 CTATGCG 35 6.2397066E-6 38.57143 1 CGAACGG 35 6.2397066E-6 38.57143 2 TAAGGCG 35 6.2397066E-6 38.57143 5 CTACGAA 90 0.0 37.5 11 TACGAAT 90 0.0 37.5 12 TATGCGG 60 1.546141E-10 37.499996 2 TCAGCGT 30 1.1388041E-4 37.499996 33 CGCTAGA 30 1.1388041E-4 37.499996 12 >>END_MODULE