SRR2934611.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934611.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	388851
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	855	0.21987856531164893	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	508	0.13064129962376334	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCATA	20	7.027523E-4	45.0	38
GTCGCAT	20	7.027523E-4	45.0	37
TGCCCCG	20	7.027523E-4	45.0	43
CAACGTA	20	7.027523E-4	45.0	34
CGCGACT	20	7.027523E-4	45.0	45
CGTTAAT	20	7.027523E-4	45.0	26
ACGATAG	20	7.027523E-4	45.0	2
CGAATAT	45	3.8380676E-10	45.0	14
CGTCGCA	20	7.027523E-4	45.0	36
ACCAACG	20	7.027523E-4	45.0	32
AATACCG	20	7.027523E-4	45.0	26
CGCTTAA	20	7.027523E-4	45.0	27
TAGCGAA	30	2.1617834E-6	44.999996	1
ACCGATA	30	2.1617834E-6	44.999996	10
TCGTCCC	65	0.0	44.999996	38
CGTCCCC	60	0.0	44.999996	39
AGGCGAT	230	0.0	43.043476	7
AAGGCGA	140	0.0	41.785713	6
TACGAAT	50	1.0768417E-9	40.5	12
TTACGGG	50	1.0768417E-9	40.5	3