SRR2934609.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934609.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	610860
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7799	1.2767246177520217	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4562	0.7468159643780898	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1699	0.27813246897816196	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	752	0.12310513047179387	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	25	3.8886523E-5	45.0	25
CCTAATG	20	7.030689E-4	45.0	44
TACGACA	20	7.030689E-4	45.0	1
CGGTCTA	25	3.8886523E-5	45.0	31
CGTTTTA	1555	0.0	44.42122	1
CGTTATT	715	0.0	43.741257	1
CGTTTTT	2910	0.0	42.98969	1
CGGTTTT	335	0.0	40.298508	1
GTTTTAT	1765	0.0	39.90085	2
AGGCGAT	315	0.0	39.285713	7
TCGCAAG	35	6.243483E-6	38.571426	2
TGTTACG	35	6.243483E-6	38.571426	1
GTTATTT	850	0.0	38.382355	2
CGAAGGA	200	0.0	38.25	4
GCGAGAC	190	0.0	37.894737	21
CTCACGA	30	1.1392955E-4	37.500004	24
CGTATAG	30	1.1392955E-4	37.500004	2
GGCGTAA	30	1.1392955E-4	37.500004	1
CACTCGA	30	1.1392955E-4	37.500004	10
ACTCGAC	30	1.1392955E-4	37.500004	11