SRR2934608.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934608.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	377050
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1162	0.3081819387349158	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	662	0.17557353136188836	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTGCG	25	3.8858023E-5	45.000004	1
CGTTATT	100	0.0	45.000004	1
TCGACGT	25	3.8858023E-5	45.000004	26
TTCGACG	25	3.8858023E-5	45.000004	25
CGACGGT	20	7.027251E-4	45.0	28
CCGTGAC	20	7.027251E-4	45.0	37
TACGGGT	20	7.027251E-4	45.0	4
TATGCGG	20	7.027251E-4	45.0	2
ATAAGCG	20	7.027251E-4	45.0	33
CGATCTA	20	7.027251E-4	45.0	10
ACGGTCT	20	7.027251E-4	45.0	30
CCCGACC	20	7.027251E-4	45.0	33
TACGAAT	50	1.0768417E-9	40.500004	12
CGTTTTA	230	0.0	40.108692	1
CGTTTTT	395	0.0	39.3038	1
GACCGAT	150	0.0	39.0	9
ACGGGTA	35	6.2371273E-6	38.571426	5
TTGACGG	65	9.094947E-12	38.07692	2
GCGATGT	95	0.0	37.894737	9
CTTCGAC	30	1.1384675E-4	37.500004	21