SRR2934607.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934607.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	187640
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1665	0.8873374547004903	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	938	0.4998934129183543	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	381	0.20304839053506715	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	332	0.17693455553186954	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGATC	45	3.8198777E-10	45.000004	6
AGGTAGC	25	3.8782928E-5	45.0	7
GATACTA	35	1.2046803E-7	45.0	1
CGGAACA	20	7.018186E-4	45.0	30
GTCGAAG	20	7.018186E-4	45.0	1
ATAGGCG	20	7.018186E-4	45.0	5
CGTTGGA	35	1.2046803E-7	45.0	34
ACATTCG	20	7.018186E-4	45.0	2
CGCGCGG	20	7.018186E-4	45.0	2
AGGACCA	35	1.2046803E-7	45.0	7
CACGAGG	20	7.018186E-4	45.0	3
TACGGGT	35	1.2046803E-7	45.0	4
CGACAGG	20	7.018186E-4	45.0	3
AGGCGAT	55	1.8189894E-12	45.0	7
AGGCGAC	20	7.018186E-4	45.0	7
CATTCGG	20	7.018186E-4	45.0	3
ACGGGGT	40	6.7630026E-9	45.0	5
ACCTCAC	35	1.2046803E-7	45.0	29
AACGGAC	25	3.8782928E-5	45.0	16
ACAGGAC	20	7.018186E-4	45.0	5