##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934606.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 790259 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.65049812782898 31.0 31.0 34.0 30.0 34.0 2 31.844132113648815 31.0 31.0 34.0 30.0 34.0 3 31.447152136198387 31.0 31.0 34.0 28.0 34.0 4 35.40380685319623 37.0 35.0 37.0 33.0 37.0 5 31.788864157194034 37.0 35.0 37.0 0.0 37.0 6 33.734061870855 37.0 35.0 37.0 18.0 37.0 7 21.0770190532471 32.0 0.0 37.0 0.0 37.0 8 28.261219422999297 35.0 17.0 37.0 17.0 37.0 9 34.80431731875246 37.0 32.0 39.0 31.0 39.0 10 36.062950247956685 37.0 35.0 39.0 32.0 39.0 11 36.50097120058108 38.0 35.0 39.0 32.0 39.0 12 36.920628553423626 39.0 37.0 39.0 33.0 39.0 13 36.74832554896559 39.0 37.0 39.0 33.0 39.0 14 38.026606466993734 40.0 37.0 41.0 33.0 41.0 15 38.195032261575 40.0 37.0 41.0 33.0 41.0 16 38.263980543087776 40.0 37.0 41.0 33.0 41.0 17 38.2564197307465 40.0 37.0 41.0 34.0 41.0 18 38.1210970074368 40.0 37.0 41.0 33.0 41.0 19 38.01862427381403 40.0 37.0 41.0 33.0 41.0 20 37.9209487016282 40.0 36.0 41.0 33.0 41.0 21 37.827500857313865 40.0 36.0 41.0 33.0 41.0 22 37.81691951625986 39.0 36.0 41.0 33.0 41.0 23 37.740714120307395 39.0 36.0 41.0 33.0 41.0 24 37.59577935841288 39.0 35.0 41.0 33.0 41.0 25 37.461357605544514 39.0 35.0 41.0 33.0 41.0 26 37.3279469136068 39.0 35.0 41.0 33.0 41.0 27 37.30587187238614 39.0 35.0 41.0 33.0 41.0 28 37.20379394603541 39.0 35.0 41.0 32.0 41.0 29 37.20409005148945 39.0 35.0 41.0 32.0 41.0 30 37.02359606154438 39.0 35.0 40.0 32.0 41.0 31 36.854456576894414 39.0 35.0 40.0 31.0 41.0 32 36.71057843061578 39.0 35.0 40.0 31.0 41.0 33 36.46813639578923 39.0 35.0 40.0 30.0 41.0 34 36.18158730239074 39.0 35.0 40.0 30.0 41.0 35 35.91490258257103 39.0 35.0 40.0 27.0 41.0 36 35.66686238309212 39.0 35.0 40.0 26.0 41.0 37 35.5563555745648 39.0 35.0 40.0 25.0 41.0 38 35.362725384968726 39.0 35.0 40.0 24.0 41.0 39 35.25653488286751 39.0 35.0 40.0 24.0 41.0 40 35.15315358635586 38.0 34.0 40.0 24.0 41.0 41 35.03010785071729 38.0 34.0 40.0 23.0 41.0 42 34.923452943908266 38.0 34.0 40.0 23.0 41.0 43 34.82870172943301 38.0 34.0 40.0 23.0 41.0 44 34.66189692240139 38.0 34.0 40.0 22.0 41.0 45 34.558509298850126 38.0 34.0 40.0 22.0 41.0 46 34.42333462826744 38.0 33.0 40.0 21.0 41.0 47 34.37716875100442 38.0 33.0 40.0 21.0 41.0 48 34.219273681160224 38.0 33.0 40.0 20.0 41.0 49 34.070904602162074 38.0 33.0 40.0 20.0 41.0 50 33.860216713760934 38.0 33.0 40.0 18.0 41.0 51 31.87382237975145 35.0 29.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 13.0 9 29.0 10 27.0 11 21.0 12 8.0 13 15.0 14 18.0 15 35.0 16 69.0 17 140.0 18 249.0 19 537.0 20 1002.0 21 1792.0 22 3041.0 23 5384.0 24 8182.0 25 11765.0 26 14309.0 27 15163.0 28 15630.0 29 16771.0 30 19012.0 31 23316.0 32 29871.0 33 40677.0 34 53627.0 35 69218.0 36 89510.0 37 141881.0 38 139923.0 39 89014.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.040261483893254 20.095690147154286 24.764918843062844 18.099129525889612 2 34.758477916733625 22.64118472551404 25.79280969909865 16.807527658653683 3 29.327979814212807 22.03277659602738 32.9774162647942 15.661827324965612 4 25.49480613317912 24.51133109524852 32.691560614937636 17.302302156634724 5 21.066764187437283 35.878363928787905 27.76671951853759 15.28815236523722 6 24.141578900082123 32.18020927316234 29.834522605879844 13.843689220875689 7 46.84932408235781 41.52220980716449 8.733339322930837 2.8951267875468676 8 80.56687744144642 3.564147956556015 12.329628640736772 3.5393459612608016 9 74.86393701305522 6.4461145017013415 14.393382422724702 4.296566062518744 10 35.07293178565508 31.45955946088561 21.269482536737954 12.198026216721354 11 25.870126123207708 24.427181468354046 32.12579673246366 17.576895675974587 12 23.752212882105738 22.040622125151373 35.21288590196379 18.9942790907791 13 21.951157784979355 23.138490039341534 36.79451926520293 18.115832910476186 14 18.312983464914666 25.432548063356442 36.50815745217707 19.74631101955182 15 17.61599678080224 25.547700184369937 38.4156333556467 18.420669679181128 16 21.075495502107536 25.164534665217353 35.39459847973892 18.365371352936187 17 21.4658738464225 24.83160584061681 33.477252394468145 20.225267918492545 18 21.839042642981603 24.51386191109497 34.56423780051857 19.08285764540486 19 20.904538891679817 26.670117012270662 32.66435434458829 19.76098975146123 20 21.675045776131626 27.129207006816753 32.73800108572 18.457746131331625 21 20.916686807742778 26.353385409087398 34.58866017343681 18.14126760973301 22 20.798244626128902 23.195053773509695 34.08920366613983 21.917497934221565 23 18.89380570167502 25.73751137285371 34.31052351191192 21.058159413559352 24 18.901777771591338 25.0462190243958 35.21946602316456 20.832537180848306 25 19.81426342502901 26.424121711995685 32.5531249881368 21.208489874838502 26 19.266468335064832 26.839048970021224 32.53325808374217 21.36122461117178 27 19.000859211979872 26.25177315285242 33.42549721040823 21.321870424759478 28 17.984103945668444 25.763199153695183 34.60169387504603 21.651003025590345 29 19.480322274089886 24.2397745549244 33.71907184859647 22.56083132238924 30 20.227292571169706 24.559922759500367 33.58481206794228 21.627972601387647 31 20.096069769531255 24.842488348756547 33.30439767215558 21.757044209556614 32 20.832790262432948 24.32480996736513 32.9122477567481 21.930152013453817 33 20.670185344298513 24.32329147785726 33.226322003292594 21.78020117455163 34 18.912027575769464 24.04642022425559 35.25489744501486 21.786654754960082 35 19.025914288859727 24.892471961723942 33.47548082337563 22.606132926040704 36 19.90182965331619 25.4525415085434 33.0246159803305 21.62101285780991 37 18.93847460136487 26.79273504003118 33.596959984005245 20.671830374598706 38 19.632171224876906 26.446139809859805 32.86302338853464 21.058665576728643 39 20.12492107018079 24.89297812489323 33.46232058097409 21.519780223951894 40 21.19824007066038 24.473621939136407 33.3455234296604 20.98261456054281 41 18.881657785612056 24.622813533284656 32.573498055700725 23.922030625402556 42 19.74491907083627 25.149476310930975 32.28966705852132 22.815937559711436 43 20.351049466061127 24.646982824618256 32.604753631404385 22.397214077916228 44 20.381419256218532 25.32536801225927 31.51295967524571 22.780253056276486 45 20.03241975099303 24.808701957206438 31.2038205196018 23.955057772198735 46 19.667855728311856 25.41331386292342 31.559526686820398 23.359303721944325 47 18.60719080706452 25.38851186762821 33.00563486148212 22.998662463825152 48 18.822310154012797 25.304109159149093 32.64372819543973 23.22985249139839 49 20.266140594412718 23.96189097498415 32.99234807828826 22.779620352314875 50 19.213068120704733 24.556379617315336 32.50465986467728 23.725892397302655 51 18.43332375841338 24.030223002838312 31.91093046710003 25.625522771648285 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 647.0 1 934.5 2 1222.0 3 10718.5 4 20215.0 5 13971.0 6 7727.0 7 6626.0 8 5525.0 9 5432.0 10 5339.0 11 5174.5 12 5010.0 13 4855.0 14 4700.0 15 4574.5 16 4449.0 17 4383.0 18 4317.0 19 4435.0 20 4553.0 21 4563.0 22 4573.0 23 4921.0 24 5269.0 25 6247.0 26 8657.5 27 10090.0 28 11644.0 29 13198.0 30 15283.0 31 17368.0 32 20371.5 33 23375.0 34 25903.5 35 28432.0 36 29550.0 37 30668.0 38 33040.0 39 35412.0 40 38997.0 41 42582.0 42 45770.5 43 48959.0 44 53108.0 45 57257.0 46 62993.0 47 68729.0 48 69439.5 49 70150.0 50 65780.0 51 61410.0 52 54065.5 53 46721.0 54 41886.0 55 37051.0 56 33562.5 57 30074.0 58 27631.0 59 25188.0 60 22942.0 61 20696.0 62 17851.0 63 15006.0 64 12590.0 65 10174.0 66 8358.0 67 6542.0 68 5365.5 69 4189.0 70 3497.5 71 2806.0 72 2178.5 73 1551.0 74 1225.5 75 677.0 76 454.0 77 347.0 78 240.0 79 178.5 80 117.0 81 94.5 82 72.0 83 52.0 84 32.0 85 25.0 86 18.0 87 16.0 88 14.0 89 9.0 90 4.0 91 3.0 92 2.0 93 2.5 94 3.0 95 3.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 790259.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.86907367155216 #Duplication Level Percentage of deduplicated Percentage of total 1 77.38691835298626 35.49666259147518 2 8.341537836918183 7.6523722715128 3 3.239367509212839 4.457603607879483 4 1.9475370332254647 3.573268786203799 5 1.391491310181225 3.1913208710013623 6 1.128509448703801 3.1058209824982415 7 0.9277161183894023 2.978743528648293 8 0.7556682766732828 2.7729443083185337 9 0.6694018923743257 2.7634360245474934 >10 4.171427030136952 30.08987476003672 >50 0.02764370954339371 0.8436912285642808 >100 0.010998019098391083 1.1334190180873884 >500 0.001188975037660934 0.36076346948824045 >1k 2.972437594152335E-4 0.569640882661326 >5k 2.972437594152335E-4 1.0104376690768517 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7411 0.9377938119021739 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4178 0.5286874303234762 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 833 0.1054084800046567 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10490231683536663 0.0 2 0.0 0.0 0.0 0.40644902493992474 0.0 3 0.0 0.0 0.0 0.5626003626659108 0.0 4 0.0 0.0 0.0 0.731026157247181 0.0 5 0.0 0.0 0.0 1.2022640678562344 0.0 6 0.0 0.0 0.0 1.7662563792376929 0.0 7 0.0 0.0 0.0 2.2657128865346676 0.0 8 0.0 0.0 0.0 3.3812965116499782 0.0 9 0.0 0.0 0.0 3.859747247421415 0.0 10 0.0 0.0 0.0 4.7480636095254845 0.0 11 0.0 0.0 0.0 5.8022749503643745 0.0 12 0.0 0.0 0.0 6.58530937325611 0.0 13 0.0 0.0 0.0 6.980622808471653 0.0 14 0.0 0.0 0.0 7.1846065656955505 0.0 15 0.0 0.0 0.0 7.434271548947876 0.0 16 0.0 0.0 0.0 7.880454382677072 0.0 17 0.0 0.0 0.0 8.459631589137231 0.0 18 0.0 0.0 0.0 9.084490021625822 0.0 19 0.0 0.0 0.0 9.511565195714317 0.0 20 0.0 0.0 0.0 9.935097227617781 0.0 21 0.0 0.0 0.0 10.467074718541642 0.0 22 0.0 0.0 0.0 11.051946260656317 0.0 23 0.0 0.0 0.0 11.662379042820138 0.0 24 0.0 0.0 0.0 12.15006725643112 0.0 25 0.0 0.0 0.0 12.573725829126907 0.0 26 0.0 0.0 0.0 12.971443539396578 0.0 27 0.0 0.0 0.0 13.395608275261655 0.0 28 1.2654079232251705E-4 0.0 0.0 13.84027261948298 0.0 29 1.2654079232251705E-4 0.0 0.0 14.304677327306617 0.0 30 1.2654079232251705E-4 0.0 0.0 14.837287522192092 0.0 31 1.2654079232251705E-4 0.0 0.0 15.303716882692889 0.0 32 1.2654079232251705E-4 0.0 0.0 15.75420210336105 0.0 33 1.2654079232251705E-4 0.0 0.0 16.209495874137467 0.0 34 1.2654079232251705E-4 0.0 0.0 16.633280987625575 0.0 35 1.2654079232251705E-4 0.0 0.0 17.101481919218887 0.0 36 1.2654079232251705E-4 0.0 0.0 17.51678879962139 0.0 37 1.2654079232251705E-4 0.0 0.0 17.990177903699927 0.0 38 1.2654079232251705E-4 0.0 0.0 18.46951442501762 0.0 39 1.2654079232251705E-4 0.0 0.0 19.090070470567245 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACTAG 35 1.2112832E-7 45.000004 2 CGTTTCA 55 1.8189894E-12 45.000004 1 GCGAAGT 20 7.031947E-4 45.0 3 TACGCGG 25 3.889695E-5 45.0 2 TGCGACG 20 7.031947E-4 45.0 1 CAATCGT 20 7.031947E-4 45.0 26 TCGGTTG 20 7.031947E-4 45.0 1 CGTAAAG 60 0.0 44.999996 2 CGTTTTA 1570 0.0 43.56688 1 CGTTTTT 3155 0.0 42.71791 1 CGTTATT 715 0.0 42.16783 1 CGGGTAT 75 0.0 42.0 6 TCACGAC 70 0.0 41.785717 25 CGGTTTA 130 0.0 39.807693 1 AGGCGAT 450 0.0 39.5 7 ACGTTAG 40 3.456389E-7 39.375 2 TGCGCAA 40 3.456389E-7 39.375 1 CGACGGT 75 0.0 39.0 28 CACGACG 75 0.0 39.0 26 TCACGGG 105 0.0 38.57143 3 >>END_MODULE