SRR2934605.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934605.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	130390
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1148	0.8804356162282383	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	663	0.5084745762711864	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	287	0.22010890405705957	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	219	0.16795766546514304	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	188	0.14418283610706342	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCTAGC	75	0.0	45.000004	21
GATTTAC	30	2.1506676E-6	45.000004	9
AGGCGAT	75	0.0	45.000004	7
CGAGGAA	30	2.1506676E-6	45.000004	5
GCCCTAG	75	0.0	45.000004	20
TTACGGG	30	2.1506676E-6	45.000004	3
GGCGATT	30	2.1506676E-6	45.000004	8
AGGTATT	20	7.010267E-4	45.0	15
CAAGTTG	25	3.8717386E-5	45.0	35
GTACAAA	20	7.010267E-4	45.0	16
CTATCTC	20	7.010267E-4	45.0	5
TTAGCCC	20	7.010267E-4	45.0	25
CGGTTTT	45	3.783498E-10	45.0	1
AGGACTA	35	1.2008786E-7	45.0	7
TTACTCT	20	7.010267E-4	45.0	16
TAAGTAC	25	3.8717386E-5	45.0	13
CGACAGG	20	7.010267E-4	45.0	3
ACGGGCG	20	7.010267E-4	45.0	5
ACGGGAA	25	3.8717386E-5	45.0	5
GGCCCAC	20	7.010267E-4	45.0	9