SRR2934604.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934604.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	521105
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2136	0.40989819710039244	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1201	0.23047178591646594	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	548	0.10516114794523178	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGATG	25	3.88786E-5	45.0	1
GGTCGAC	20	7.029734E-4	45.0	8
CGACGGT	25	3.88786E-5	45.0	28
CGTGACA	20	7.029734E-4	45.0	26
TATGCGC	20	7.029734E-4	45.0	12
GTATGCG	20	7.029734E-4	45.0	11
TATTCGG	20	7.029734E-4	45.0	45
ACGCTAG	20	7.029734E-4	45.0	2
CGGTCTA	25	3.88786E-5	45.0	31
TAATGCG	20	7.029734E-4	45.0	1
CGCCCTG	20	7.029734E-4	45.0	32
GCGTAAA	30	2.1632095E-6	44.999996	1
CGTTTTA	485	0.0	44.072166	1
CGAATAT	160	0.0	43.59375	14
TACGAAT	165	0.0	42.272728	12
CCTATGC	145	0.0	41.89655	35
CGTTATT	235	0.0	41.17021	1
ACGGGTA	55	6.002665E-11	40.90909	5
AGTACGG	50	1.0786607E-9	40.5	2
GCGATCA	45	1.9248546E-8	40.0	9