##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934604.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 521105 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.057021137774534 33.0 31.0 34.0 30.0 34.0 2 32.260049318275584 33.0 31.0 34.0 30.0 34.0 3 32.08061906909356 33.0 31.0 34.0 30.0 34.0 4 35.849189702651096 37.0 35.0 37.0 35.0 37.0 5 32.101121654944784 37.0 35.0 37.0 0.0 37.0 6 33.99975244912254 37.0 35.0 37.0 19.0 37.0 7 20.786864451502097 32.0 0.0 37.0 0.0 37.0 8 28.1195862638048 35.0 17.0 37.0 17.0 37.0 9 34.90676351215206 37.0 32.0 39.0 32.0 39.0 10 36.34992755778586 37.0 35.0 39.0 32.0 39.0 11 36.80169447616123 39.0 37.0 39.0 33.0 39.0 12 37.1466652594007 39.0 37.0 39.0 34.0 39.0 13 36.94514349315397 39.0 37.0 39.0 33.0 39.0 14 38.364538816553285 40.0 38.0 41.0 34.0 41.0 15 38.525778873739455 40.0 38.0 41.0 34.0 41.0 16 38.57942833018298 40.0 38.0 41.0 34.0 41.0 17 38.54322257510483 40.0 38.0 41.0 34.0 41.0 18 38.4331698985809 40.0 38.0 41.0 34.0 41.0 19 38.37188090691895 40.0 37.0 41.0 34.0 41.0 20 38.332794734266606 40.0 37.0 41.0 34.0 41.0 21 38.254973565788084 40.0 37.0 41.0 34.0 41.0 22 38.24430393106955 40.0 37.0 41.0 34.0 41.0 23 38.14551961696779 40.0 37.0 41.0 34.0 41.0 24 38.044518858963166 40.0 37.0 41.0 34.0 41.0 25 37.90311933295593 40.0 36.0 41.0 33.0 41.0 26 37.781995950912005 40.0 36.0 41.0 33.0 41.0 27 37.75791251283331 40.0 36.0 41.0 33.0 41.0 28 37.66398134732923 40.0 36.0 41.0 33.0 41.0 29 37.68255533913511 40.0 36.0 41.0 33.0 41.0 30 37.52985290872281 40.0 36.0 41.0 33.0 41.0 31 37.3979006150392 40.0 36.0 41.0 33.0 41.0 32 37.30834860536744 40.0 36.0 41.0 32.0 41.0 33 37.15861294748659 40.0 35.0 41.0 32.0 41.0 34 36.98224350178947 40.0 35.0 41.0 31.0 41.0 35 36.83873883382428 40.0 35.0 41.0 31.0 41.0 36 36.69593268151332 40.0 35.0 41.0 30.0 41.0 37 36.61554389230577 39.0 35.0 41.0 30.0 41.0 38 36.52816994655588 39.0 35.0 41.0 30.0 41.0 39 36.47076117097322 39.0 35.0 41.0 30.0 41.0 40 36.36324733019257 39.0 35.0 41.0 30.0 41.0 41 36.271843486437476 39.0 35.0 41.0 30.0 41.0 42 36.17363487205074 39.0 35.0 41.0 29.0 41.0 43 36.11298490707247 39.0 35.0 41.0 29.0 41.0 44 35.95722743017242 39.0 35.0 40.0 29.0 41.0 45 35.88965947361856 39.0 35.0 40.0 28.0 41.0 46 35.76516632924267 39.0 35.0 40.0 28.0 41.0 47 35.75815046871552 39.0 35.0 40.0 28.0 41.0 48 35.639554408420565 38.0 35.0 40.0 27.0 41.0 49 35.51133648688844 38.0 35.0 40.0 27.0 41.0 50 35.37408391782846 38.0 34.0 40.0 27.0 41.0 51 33.625810537223785 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 11.0 9 34.0 10 30.0 11 21.0 12 18.0 13 10.0 14 17.0 15 18.0 16 44.0 17 87.0 18 160.0 19 316.0 20 491.0 21 928.0 22 1389.0 23 2172.0 24 3393.0 25 4786.0 26 5758.0 27 6325.0 28 6939.0 29 7736.0 30 9704.0 31 12230.0 32 16391.0 33 24220.0 34 33944.0 35 44217.0 36 56463.0 37 99258.0 38 110344.0 39 73634.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.0142005929707 21.148329031577127 25.236372707995507 13.601097667456655 2 32.42225655098301 24.805557421249077 25.701154277928634 17.071031749839282 3 31.992016963951603 23.378205927788066 28.446474318995215 16.18330278926512 4 28.170138455781462 25.283963884437878 27.991287744312565 18.55460991546809 5 22.7196054537953 37.494554840195356 23.119332955930187 16.666506750079158 6 25.747210255130927 35.43450935991787 25.15730994713158 13.660970437819634 7 49.444161925139845 42.83973479433128 5.302961975033822 2.4131413054950537 8 85.66507709578684 4.5572389441667225 7.332303470509782 2.4453804895366575 9 79.15602421776802 7.938323370529932 9.013346638393415 3.8923057733086424 10 38.87700175588413 33.28676562305102 15.370222891739669 12.466009729325183 11 31.296955508007024 25.676207290277393 26.14252405945059 16.884313142264993 12 30.258585122000365 23.530766352270653 28.127728576774352 18.082919948954626 13 24.254420894061656 25.459360397616603 29.342646875389793 20.943571832931944 14 19.971790713963596 27.74757486495044 30.299843601577418 21.980790819508545 15 20.225674288291227 26.936989666190115 33.53853829842354 19.298797747095115 16 23.572408631657726 25.0592490956717 32.00429855787221 19.364043714798363 17 23.489315972788592 25.425777914239934 28.924688882279003 22.16021723069247 18 23.62307020658025 26.59272123660299 29.586743554561938 20.197465002254823 19 24.908799570144215 27.555483060035886 27.231939820189787 20.303777549630116 20 26.65144260753591 25.526909164179962 29.229425931434168 18.592222296849965 21 24.90476967213901 26.906093781483577 28.493297895817545 19.695838650559867 22 25.166137342762013 25.00647662179407 28.704195891423034 21.123190144020878 23 24.449391197551357 26.53879736329531 29.115245487953484 19.896565951199854 24 22.99881981558419 25.493326680803293 30.846182631139595 20.661670872472918 25 22.399900212049396 27.618042429068996 28.475643104556664 21.506414254324945 26 21.903647057694705 29.316740388213507 27.68079369800712 21.098818856084666 27 21.65590428032738 29.244969823739936 28.609973038063348 20.489152857869335 28 19.98848600569943 29.442434825994763 30.57387666593105 19.995202502374763 29 21.901536158739603 26.616900624634194 29.92467928728375 21.556883929342455 30 22.06311587875764 27.520173477514128 29.62454783584882 20.79216280787941 31 23.03835119601616 27.948110265685415 28.503852390593064 20.50968614770536 32 23.87100488385258 28.627244029514205 28.12600147762927 19.375749609003943 33 24.09188167451857 28.21677013269878 27.796893140537893 19.89445505224475 34 22.265186478732694 28.126960977154315 29.32019458650368 20.287657957609312 35 22.663378781627504 27.106245382408535 28.69863079417776 21.531745041786206 36 22.643421191506512 30.195258153347215 27.218890626649138 19.942430028497135 37 22.648794388846778 30.607267249402714 27.323667974784353 19.42027038696616 38 22.002859308584643 29.283733604551866 27.34976636186565 21.36364072499784 39 22.983275923278416 28.088580996152405 28.004912637568246 20.923230443000932 40 23.022039704090346 27.23501021866994 28.898398595292697 20.844551481947015 41 20.70791874958022 28.360311261645926 29.380834956486694 21.550935032287157 42 21.411615701250227 28.962109363755868 27.542625766400246 22.08364916859366 43 21.780639218583588 28.645858320300132 28.113336083898638 21.460166377217643 44 21.26711507277804 28.988015850932154 27.711113882998628 22.033755193291178 45 21.687951564463976 28.93927327505973 26.94639276153558 22.42638239894071 46 20.971205419253316 30.705903800577616 26.99110543940281 21.331785340766256 47 22.432139396091 27.999539440227977 28.790358948772322 20.777962214908705 48 21.78370961706374 27.295650588652958 29.560837067385652 21.35980272689765 49 21.47897256790858 27.75736176010593 28.666007810326132 22.097657861659357 50 20.090960554974522 29.705529595762847 28.37201715585151 21.831492693411118 51 20.47399276537358 28.241333320540008 27.925849876704312 23.3588240373821 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 320.0 1 837.0 2 1354.0 3 4079.5 4 6805.0 5 4796.5 6 2788.0 7 2364.5 8 1941.0 9 1887.5 10 1834.0 11 1812.0 12 1790.0 13 1791.0 14 1792.0 15 1727.5 16 1663.0 17 1734.0 18 1805.0 19 1955.0 20 2105.0 21 2230.0 22 2355.0 23 2733.5 24 3112.0 25 3946.0 26 5946.0 27 7112.0 28 8557.0 29 10002.0 30 11321.5 31 12641.0 32 14319.5 33 15998.0 34 17463.5 35 18929.0 36 20583.5 37 22238.0 38 24171.0 39 26104.0 40 27496.5 41 28889.0 42 30783.5 43 32678.0 44 34405.0 45 36132.0 46 36349.5 47 36567.0 48 35599.5 49 34632.0 50 33337.0 51 32042.0 52 30330.5 53 28619.0 54 27631.5 55 26644.0 56 25883.5 57 25123.0 58 24591.0 59 24059.0 60 22945.0 61 21831.0 62 19265.5 63 16700.0 64 13831.0 65 10962.0 66 9017.5 67 7073.0 68 5842.0 69 4611.0 70 3756.5 71 2902.0 72 2363.5 73 1825.0 74 1444.0 75 843.5 76 624.0 77 466.0 78 308.0 79 224.5 80 141.0 81 114.5 82 88.0 83 74.0 84 60.0 85 43.0 86 26.0 87 20.0 88 14.0 89 13.5 90 13.0 91 11.5 92 10.0 93 5.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 521105.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.22959839903334 #Duplication Level Percentage of deduplicated Percentage of total 1 69.40811478543512 22.369956651685822 2 7.380597335730851 4.757473761511616 3 3.856198654754432 3.7285120196888393 4 2.730088245164797 3.5195859094233235 5 2.1100487867850624 3.4003012500225043 6 1.6722818843065212 3.2338184124706753 7 1.424277365926613 3.2132721258853447 8 1.2775501626976578 3.2939942942692175 9 1.123243438896739 3.2581516445991943 >10 8.963337150190386 46.846694156999256 >50 0.040998099195575136 0.8717038666288637 >100 0.011455351245822455 0.7516162630674191 >500 6.029132234643398E-4 0.10648544781823828 >1k 0.0012058264469286795 0.6484341959296737 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2136 0.40989819710039244 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1201 0.23047178591646594 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 548 0.10516114794523178 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.8379981001909405E-4 0.0 0.0 0.01803859107089742 0.0 2 3.8379981001909405E-4 0.0 0.0 0.06793256637337965 0.0 3 3.8379981001909405E-4 0.0 0.0 0.09863655117490717 0.0 4 3.8379981001909405E-4 0.0 0.0 0.1220483395860719 0.0 5 3.8379981001909405E-4 0.0 0.0 0.20590859807524395 0.0 6 3.8379981001909405E-4 0.0 0.0 0.27518446378369044 0.0 7 3.8379981001909405E-4 0.0 0.0 0.340622331391946 0.0 8 3.8379981001909405E-4 0.0 0.0 0.5213920419109392 0.0 9 3.8379981001909405E-4 0.0 0.0 0.5893246082843189 0.0 10 3.8379981001909405E-4 0.0 0.0 0.7764270156686273 0.0 11 3.8379981001909405E-4 0.0 0.0 1.0155342973105228 0.0 12 3.8379981001909405E-4 0.0 0.0 1.2128073996603372 0.0 13 3.8379981001909405E-4 0.0 0.0 1.2974352577695474 0.0 14 3.8379981001909405E-4 0.0 0.0 1.3342800395313805 0.0 15 3.8379981001909405E-4 0.0 0.0 1.4010612064747028 0.0 16 3.8379981001909405E-4 0.0 0.0 1.5486322334270444 0.0 17 3.8379981001909405E-4 0.0 0.0 1.740724038341601 0.0 18 3.8379981001909405E-4 0.0 0.0 1.9278264457259093 0.0 19 3.8379981001909405E-4 0.0 0.0 2.0425825889216185 0.0 20 3.8379981001909405E-4 0.0 0.0 2.17326642423312 0.0 21 3.8379981001909405E-4 0.0 0.0 2.3434816399765883 0.0 22 3.8379981001909405E-4 0.0 0.0 2.5179186536302662 0.0 23 3.8379981001909405E-4 0.0 0.0 2.716918855125167 0.0 24 3.8379981001909405E-4 0.0 0.0 2.8696711795127663 0.0 25 3.8379981001909405E-4 0.0 0.0 3.02050450485027 0.0 26 3.8379981001909405E-4 0.0 0.0 3.1686512315176403 0.0 27 3.8379981001909405E-4 0.0 0.0 3.3087381621746097 0.0 28 3.8379981001909405E-4 0.0 0.0 3.4574605885570087 0.0 29 3.8379981001909405E-4 0.0 0.0 3.6190403085750473 0.0 30 3.8379981001909405E-4 0.0 0.0 3.7892555243185155 0.0 31 3.8379981001909405E-4 0.0 0.0 3.970792834457547 0.0 32 3.8379981001909405E-4 0.0 0.0 4.136594352385796 0.0 33 3.8379981001909405E-4 0.0 0.0 4.319666861764904 0.0 34 3.8379981001909405E-4 0.0 0.0 4.481438481687952 0.0 35 3.8379981001909405E-4 0.0 0.0 4.671227487742393 0.0 36 3.8379981001909405E-4 0.0 0.0 4.871379088667351 0.0 37 3.8379981001909405E-4 0.0 0.0 5.0803580852227475 0.0 38 3.8379981001909405E-4 0.0 0.0 5.300275376363689 0.0 39 3.8379981001909405E-4 0.0 0.0 5.525182065034878 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATG 25 3.88786E-5 45.0 1 GGTCGAC 20 7.029734E-4 45.0 8 CGACGGT 25 3.88786E-5 45.0 28 CGTGACA 20 7.029734E-4 45.0 26 TATGCGC 20 7.029734E-4 45.0 12 GTATGCG 20 7.029734E-4 45.0 11 TATTCGG 20 7.029734E-4 45.0 45 ACGCTAG 20 7.029734E-4 45.0 2 CGGTCTA 25 3.88786E-5 45.0 31 TAATGCG 20 7.029734E-4 45.0 1 CGCCCTG 20 7.029734E-4 45.0 32 GCGTAAA 30 2.1632095E-6 44.999996 1 CGTTTTA 485 0.0 44.072166 1 CGAATAT 160 0.0 43.59375 14 TACGAAT 165 0.0 42.272728 12 CCTATGC 145 0.0 41.89655 35 CGTTATT 235 0.0 41.17021 1 ACGGGTA 55 6.002665E-11 40.90909 5 AGTACGG 50 1.0786607E-9 40.5 2 GCGATCA 45 1.9248546E-8 40.0 9 >>END_MODULE