SRR2934603.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934603.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	573973
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1589	0.2768422904910161	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	935	0.16289964858974204	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATACG	20	7.0303306E-4	45.000004	1
ATCCGGT	20	7.0303306E-4	45.000004	25
CGGATAG	20	7.0303306E-4	45.000004	2
TTGCGAA	30	2.1635951E-6	45.000004	1
CGGCTAG	35	1.210501E-7	45.000004	2
CCTATCA	20	7.0303306E-4	45.000004	16
GTGCGAA	30	2.1635951E-6	45.000004	1
CGTTATT	190	0.0	42.63158	1
CGTTTTA	350	0.0	39.857143	1
TCACGAC	40	3.454188E-7	39.375004	25
CGTCTCG	40	3.454188E-7	39.375004	42
TCGTATA	35	6.2428226E-6	38.57143	32
ACATACG	70	0.0	38.57143	17
CGTAAAG	65	9.094947E-12	38.07692	2
TTGGACG	30	1.1392097E-4	37.500004	1
CGTTAAG	30	1.1392097E-4	37.500004	2
CGCTAAG	30	1.1392097E-4	37.500004	2
CGTAACG	30	1.1392097E-4	37.500004	34
TATACGG	30	1.1392097E-4	37.500004	2
CCCGGAT	30	1.1392097E-4	37.500004	19