##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934603.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 573973 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.019216931806895 33.0 31.0 34.0 30.0 34.0 2 32.208706681324735 33.0 31.0 34.0 30.0 34.0 3 32.07922672320824 33.0 31.0 34.0 30.0 34.0 4 35.83162622632075 37.0 35.0 37.0 35.0 37.0 5 32.13989333993062 37.0 35.0 37.0 0.0 37.0 6 34.00433818315496 37.0 35.0 37.0 19.0 37.0 7 20.751648596710996 32.0 0.0 37.0 0.0 37.0 8 28.093532274166208 35.0 17.0 37.0 17.0 37.0 9 34.870392858200645 37.0 32.0 39.0 32.0 39.0 10 36.15090779531442 37.0 35.0 39.0 32.0 39.0 11 36.67519900761882 38.0 35.0 39.0 33.0 39.0 12 37.04989259076646 39.0 37.0 39.0 34.0 39.0 13 36.86586825512698 39.0 37.0 39.0 33.0 39.0 14 38.2541234518 40.0 38.0 41.0 34.0 41.0 15 38.430197936139855 40.0 38.0 41.0 34.0 41.0 16 38.49130011341997 40.0 38.0 41.0 34.0 41.0 17 38.48074560998514 40.0 38.0 41.0 34.0 41.0 18 38.37219346554629 40.0 38.0 41.0 34.0 41.0 19 38.319863477898785 40.0 37.0 41.0 34.0 41.0 20 38.313530427389445 40.0 37.0 41.0 34.0 41.0 21 38.230589243744916 40.0 37.0 41.0 34.0 41.0 22 38.217647868453746 40.0 37.0 41.0 34.0 41.0 23 38.15093392894788 40.0 37.0 41.0 34.0 41.0 24 38.05863342003892 40.0 37.0 41.0 34.0 41.0 25 37.92429957506712 40.0 37.0 41.0 33.0 41.0 26 37.80929242316276 40.0 36.0 41.0 33.0 41.0 27 37.76539488791285 40.0 36.0 41.0 33.0 41.0 28 37.70199817761463 40.0 36.0 41.0 33.0 41.0 29 37.7052213257418 40.0 36.0 41.0 33.0 41.0 30 37.57631456531927 40.0 36.0 41.0 33.0 41.0 31 37.462706433926336 40.0 36.0 41.0 33.0 41.0 32 37.36755039000092 40.0 36.0 41.0 32.0 41.0 33 37.23745890486138 40.0 36.0 41.0 32.0 41.0 34 37.1060973251355 40.0 36.0 41.0 31.0 41.0 35 36.99021905211569 40.0 36.0 41.0 31.0 41.0 36 36.846421347345604 40.0 35.0 41.0 31.0 41.0 37 36.767391497509465 39.0 35.0 41.0 31.0 41.0 38 36.65252198274135 39.0 35.0 41.0 30.0 41.0 39 36.555522646535636 39.0 35.0 41.0 30.0 41.0 40 36.45649359813092 39.0 35.0 41.0 30.0 41.0 41 36.35082312234199 39.0 35.0 41.0 30.0 41.0 42 36.23962973868109 39.0 35.0 41.0 29.0 41.0 43 36.153346934437685 39.0 35.0 40.0 29.0 41.0 44 36.01870645483324 39.0 35.0 40.0 29.0 41.0 45 35.92748787834968 39.0 35.0 40.0 28.0 41.0 46 35.804389753524994 39.0 35.0 40.0 28.0 41.0 47 35.75911933139712 39.0 35.0 40.0 28.0 41.0 48 35.64058065449072 38.0 35.0 40.0 27.0 41.0 49 35.52526338346926 38.0 35.0 40.0 27.0 41.0 50 35.39140517062649 38.0 34.0 40.0 26.0 41.0 51 33.62348403147883 37.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 17.0 9 33.0 10 34.0 11 24.0 12 12.0 13 12.0 14 24.0 15 43.0 16 62.0 17 93.0 18 197.0 19 333.0 20 620.0 21 1019.0 22 1573.0 23 2443.0 24 3499.0 25 4778.0 26 5961.0 27 6483.0 28 7351.0 29 8439.0 30 10725.0 31 13665.0 32 18084.0 33 26606.0 34 37146.0 35 48603.0 36 65998.0 37 113939.0 38 117962.0 39 78188.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.017702923308235 20.36506943706411 23.538563660659996 13.078663978967652 2 32.95033041623909 24.45585419523218 25.658175558780638 16.93563982974809 3 33.02559528061425 23.984054999102746 26.783489815723037 16.20685990455997 4 27.309995417902933 26.83122725284987 27.507217238441527 18.351560090805666 5 22.540433086573756 37.528594550614756 23.581771267986472 16.349201094825016 6 26.363783662297703 35.88740236910098 24.78374418308875 12.96506978551256 7 49.35685128046093 43.26754045922021 4.948839056889436 2.42676920342943 8 86.06119103163388 4.737330850057407 6.717563369705544 2.483914748603157 9 80.46859347042457 7.10991632010565 8.343946492256604 4.077543717213179 10 39.06455530138177 29.29928759715178 17.87070123507552 13.765455866390926 11 31.690515059070723 28.190001968733718 23.237504203159382 16.881978769036174 12 27.620462983450437 25.855745827765418 27.93424080923667 18.58955037954747 13 24.4164795208137 26.2801560352142 29.99252578082941 19.31083866314269 14 21.303092654184084 28.26352459087797 29.932244199640053 20.5011385552979 15 21.734123382110308 27.246752024921033 32.29577001008758 18.723354582881075 16 24.468049890848526 25.729607490247798 30.959818667428607 18.84252395147507 17 25.3203547902079 25.655039522765012 28.155854021007958 20.868751666019133 18 25.123307193892398 25.81201554776967 29.44650706566337 19.61817019267457 19 25.033059046331445 27.67569206217017 27.222186409465255 20.069062482033125 20 25.49301099529072 27.470978600038677 28.24523104745345 18.79077935721715 21 25.068426563618846 27.288391614239693 29.133426136769497 18.50975568537196 22 24.830958947546314 25.14682746400963 29.468459317772787 20.553754270671266 23 22.87337557689996 27.068172196253133 29.763072479019048 20.29537974782786 24 21.957827284558682 27.233685208189236 30.608931082124073 20.199556425128012 25 22.841840992520552 27.55460622712218 29.068788950002876 20.53476383035439 26 22.57092232561462 28.571553017302207 28.10219296029604 20.75533169678713 27 22.34547618093534 28.28652218832593 29.245452312216774 20.12254931852195 28 20.983042756366586 27.849393612591534 30.731410710956787 20.43615292008509 29 21.853989647596663 27.169222245645702 29.90767858418427 21.069109522573363 30 22.492521425223835 27.648687307591125 29.46689129976497 20.39189996742007 31 23.917675570105214 26.773559035006873 28.194357574310985 21.114407820576925 32 23.551456253168706 27.97709996811697 28.592459924073083 19.87898385464125 33 23.309110358849633 27.791899618971623 28.284431497648843 20.6145585245299 34 21.986922729814818 27.758622792361315 29.810984140368973 20.443470337454897 35 22.584337590792597 27.812806525742502 28.911812924998216 20.69104295846669 36 23.648150696984004 28.48025952440272 27.60600237293392 20.265587405679362 37 22.112364170440074 29.41479825706087 28.282166582748662 20.19067098975039 38 22.532418772311587 29.037951262515833 27.589625295963398 20.84000466920918 39 22.02037378064822 28.629743907814483 28.122751418620734 21.227130892916566 40 23.1758288281853 27.589799520186492 28.51440747212848 20.719964179499733 41 21.520524484601193 28.17310221909393 28.503954018743045 21.802419277561835 42 22.214111116725004 27.382124246262457 28.642984948769367 21.760779688243176 43 22.269688643890913 27.557045366245454 28.644378742554093 21.52888724730954 44 21.791268927284037 28.117350467704927 28.370498263855616 21.72088234115542 45 21.7342976063334 28.878710322610996 27.663670590776917 21.723321480278692 46 22.089889245661382 28.750655518639377 28.20028119789607 20.959174037803173 47 21.783254613021867 28.01978490277417 29.028543154468938 21.16841732973502 48 21.939707965357254 28.339660576368576 28.543851365830797 21.176780092443373 49 22.083094500960847 27.599033404010292 28.834631594169064 21.483240500859797 50 21.480278689067255 28.8618105729712 28.524512477067738 21.133398260893806 51 21.017364928315445 28.429734499706434 28.045395863568494 22.507504708409627 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 350.0 1 809.0 2 1268.0 3 3222.0 4 5176.0 5 3643.5 6 2111.0 7 1883.5 8 1656.0 9 1634.0 10 1612.0 11 1607.5 12 1603.0 13 1588.0 14 1573.0 15 1598.0 16 1623.0 17 1625.5 18 1628.0 19 1718.5 20 1809.0 21 2194.5 22 2580.0 23 2882.5 24 3185.0 25 4323.5 26 6647.0 27 7832.0 28 9017.5 29 10203.0 30 11661.0 31 13119.0 32 14987.5 33 16856.0 34 19105.0 35 21354.0 36 23008.5 37 24663.0 38 26504.5 39 28346.0 40 31404.5 41 34463.0 42 36477.5 43 38492.0 44 39919.0 45 41346.0 46 42588.5 47 43831.0 48 42774.5 49 41718.0 50 40717.5 51 39717.0 52 37920.5 53 36124.0 54 33836.0 55 31548.0 56 29384.5 57 27221.0 58 25644.5 59 24068.0 60 21559.0 61 19050.0 62 16900.0 63 14750.0 64 12540.5 65 10331.0 66 8628.0 67 6925.0 68 5560.5 69 4196.0 70 3365.5 71 2535.0 72 2029.0 73 1523.0 74 1242.5 75 725.5 76 489.0 77 393.0 78 297.0 79 241.5 80 186.0 81 134.5 82 83.0 83 69.5 84 56.0 85 42.5 86 29.0 87 20.5 88 12.0 89 9.0 90 6.0 91 4.0 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 573973.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.57471219869321 #Duplication Level Percentage of deduplicated Percentage of total 1 69.34430910558504 23.97559529942824 2 8.16967888990416 5.6492859274835165 3 4.113856359756853 4.267061989960707 4 2.8433888950357615 3.9323741085928705 5 2.050248457464244 3.544337517632048 6 1.709864641177462 3.5470846720459552 7 1.4260843081690822 3.4514518168212973 8 1.284582200326753 3.5531247897489244 9 1.0722279698221004 3.3364776121189412 >10 7.954497562166073 43.30291293249158 >50 0.02225402787932844 0.5080047588765499 >100 0.007947867099743778 0.4698998220397471 >500 5.298578066495851E-4 0.17128901895016124 >1k 5.298578066495851E-4 0.29109973380941845 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1589 0.2768422904910161 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 935 0.16289964858974204 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010627677608528624 0.0 2 0.0 0.0 0.0 0.06672787744371252 0.0 3 0.0 0.0 0.0 0.08676366309913533 0.0 4 0.0 0.0 0.0 0.12126005927108069 0.0 5 0.0 0.0 0.0 0.2383387371879862 0.0 6 0.0 0.0 0.0 0.30855109909351136 0.0 7 0.0 0.0 0.0 0.3810283758992148 0.0 8 0.0 0.0 0.0 0.5491547511816758 0.0 9 0.0 0.0 0.0 0.6136177137252101 0.0 10 0.0 0.0 0.0 0.8517822266901056 0.0 11 0.0 0.0 0.0 1.0699109539995784 0.0 12 0.0 0.0 0.0 1.3089465880799271 0.0 13 0.0 0.0 0.0 1.3809011922163585 0.0 14 0.0 0.0 0.0 1.4176625032884822 0.0 15 0.0 0.0 0.0 1.4927531434405452 0.0 16 0.0 0.0 0.0 1.6340489883670486 0.0 17 0.0 0.0 0.0 1.794857946279703 0.0 18 0.0 0.0 0.0 1.9750057929554177 0.0 19 0.0 0.0 0.0 2.088774210633601 0.0 20 0.0 0.0 0.0 2.2107311667970446 0.0 21 0.0 0.0 0.0 2.3623062408858955 0.0 22 0.0 0.0 0.0 2.5283419254912687 0.0 23 0.0 0.0 0.0 2.711625808182615 0.0 24 0.0 0.0 0.0 2.8576257071325655 0.0 25 0.0 0.0 0.0 2.9919525831354434 0.0 26 0.0 0.0 0.0 3.123317647345781 0.0 27 0.0 0.0 0.0 3.2633939227106503 0.0 28 0.0 0.0 0.0 3.3937136415824436 0.0 29 0.0 0.0 0.0 3.546508285232929 0.0 30 0.0 0.0 0.0 3.723171647446831 0.0 31 0.0 0.0 0.0 3.893737161852561 0.0 32 0.0 0.0 0.0 4.060992416019569 0.0 33 0.0 0.0 0.0 4.229467239748211 0.0 34 0.0 0.0 0.0 4.406130601962113 0.0 35 0.0 0.0 0.0 4.583316636845288 0.0 36 0.0 0.0 0.0 4.764335604636455 0.0 37 0.0 0.0 0.0 4.957027595374695 0.0 38 0.0 0.0 0.0 5.152681397905476 0.0 39 0.0 0.0 0.0 5.416979544333967 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 20 7.0303306E-4 45.000004 1 ATCCGGT 20 7.0303306E-4 45.000004 25 CGGATAG 20 7.0303306E-4 45.000004 2 TTGCGAA 30 2.1635951E-6 45.000004 1 CGGCTAG 35 1.210501E-7 45.000004 2 CCTATCA 20 7.0303306E-4 45.000004 16 GTGCGAA 30 2.1635951E-6 45.000004 1 CGTTATT 190 0.0 42.63158 1 CGTTTTA 350 0.0 39.857143 1 TCACGAC 40 3.454188E-7 39.375004 25 CGTCTCG 40 3.454188E-7 39.375004 42 TCGTATA 35 6.2428226E-6 38.57143 32 ACATACG 70 0.0 38.57143 17 CGTAAAG 65 9.094947E-12 38.07692 2 TTGGACG 30 1.1392097E-4 37.500004 1 CGTTAAG 30 1.1392097E-4 37.500004 2 CGCTAAG 30 1.1392097E-4 37.500004 2 CGTAACG 30 1.1392097E-4 37.500004 34 TATACGG 30 1.1392097E-4 37.500004 2 CCCGGAT 30 1.1392097E-4 37.500004 19 >>END_MODULE