SRR2934602.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934602.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	544082
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7256	1.3336225054311666	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4044	0.7432703158715047	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1616	0.2970140530287714	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	828	0.15218294301226654	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG	588	0.10807194503769653	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC	577	0.10605019096386206	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTACG	20	7.0300093E-4	45.0	1
CGAACGG	20	7.0300093E-4	45.0	2
ACGCATA	20	7.0300093E-4	45.0	1
CGCATAG	45	3.8380676E-10	45.0	2
ATAGCGG	25	3.8880884E-5	45.0	2
TCGATAG	20	7.0300093E-4	45.0	2
ATCGTTC	20	7.0300093E-4	45.0	33
ACGATAT	20	7.0300093E-4	45.0	15
CGAATGG	40	6.8030204E-9	45.0	2
GGTGCGC	20	7.0300093E-4	45.0	8
CGGTCTA	20	7.0300093E-4	45.0	31
AACTCGC	20	7.0300093E-4	45.0	24
AGGATCG	25	3.8880884E-5	45.0	7
TACGTTG	20	7.0300093E-4	45.0	1
CGGACGG	30	2.163386E-6	44.999996	2
CGTTTTA	1700	0.0	44.073532	1
CGTTATT	770	0.0	43.538963	1
CGTTTTT	3185	0.0	43.09262	1
CGGTTTT	380	0.0	42.63158	1
AGGCGAT	245	0.0	42.2449	7