SRR2934601.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934601.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	421346
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1001	0.23757197172869804	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	602	0.14287545152914707	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	25	3.886585E-5	45.0	25
ACCGACC	20	7.028195E-4	45.0	32
TTCCGCA	20	7.028195E-4	45.0	14
CGCGAAG	20	7.028195E-4	45.0	2
TATGACG	20	7.028195E-4	45.0	1
GGCGCGA	20	7.028195E-4	45.0	9
CGGTCAA	20	7.028195E-4	45.0	44
CGCAAAA	20	7.028195E-4	45.0	45
CCGCAAA	20	7.028195E-4	45.0	44
AGGCGAT	255	0.0	43.235294	7
AAGGCGA	150	0.0	42.000004	6
CGTTTTA	270	0.0	41.666664	1
TACGAAT	55	6.002665E-11	40.909092	12
TTACGGG	105	0.0	40.714287	3
CTCGTAC	45	1.9233994E-8	40.0	29
TACGGGA	135	0.0	40.0	4
CCGATTA	35	6.2388717E-6	38.571426	11
TTAACGG	35	6.2388717E-6	38.571426	2
ATAGGAT	185	0.0	37.702705	5
CTCACGA	30	1.13869464E-4	37.500004	24