##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934601.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 421346 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.043622106297434 33.0 31.0 34.0 30.0 34.0 2 32.24190332885562 33.0 31.0 34.0 30.0 34.0 3 32.132551394815664 33.0 31.0 34.0 30.0 34.0 4 35.88185244430943 37.0 35.0 37.0 35.0 37.0 5 32.1017595989994 37.0 35.0 37.0 0.0 37.0 6 33.99859023225567 37.0 35.0 37.0 19.0 37.0 7 20.724976622538247 32.0 0.0 37.0 0.0 37.0 8 28.102400402519546 35.0 17.0 37.0 17.0 37.0 9 34.897395489692556 37.0 32.0 39.0 32.0 39.0 10 36.33715521210596 37.0 35.0 39.0 32.0 39.0 11 36.7776150716988 39.0 37.0 39.0 33.0 39.0 12 37.10089807426675 39.0 37.0 39.0 34.0 39.0 13 36.87559630327569 39.0 37.0 39.0 33.0 39.0 14 38.266916026258706 40.0 38.0 41.0 34.0 41.0 15 38.46859825416641 40.0 38.0 41.0 34.0 41.0 16 38.53272132641582 40.0 38.0 41.0 34.0 41.0 17 38.49580392361622 40.0 38.0 41.0 34.0 41.0 18 38.411664048074506 40.0 38.0 41.0 34.0 41.0 19 38.35950501488088 40.0 37.0 41.0 34.0 41.0 20 38.35696078757126 40.0 37.0 41.0 34.0 41.0 21 38.26682821244298 40.0 37.0 41.0 34.0 41.0 22 38.23881797857343 40.0 37.0 41.0 34.0 41.0 23 38.175651364911495 40.0 37.0 41.0 34.0 41.0 24 38.076061004495116 40.0 37.0 41.0 34.0 41.0 25 37.95075543614986 40.0 36.0 41.0 33.0 41.0 26 37.808672682308604 40.0 36.0 41.0 33.0 41.0 27 37.76975217517195 40.0 36.0 41.0 33.0 41.0 28 37.69332804868208 40.0 36.0 41.0 33.0 41.0 29 37.68519221732258 40.0 36.0 41.0 33.0 41.0 30 37.55129988180735 40.0 36.0 41.0 33.0 41.0 31 37.428403260028574 40.0 36.0 41.0 33.0 41.0 32 37.335724084244305 40.0 36.0 41.0 32.0 41.0 33 37.21048259625106 40.0 36.0 41.0 32.0 41.0 34 37.068622936968666 40.0 35.0 41.0 31.0 41.0 35 36.94032932554243 40.0 35.0 41.0 31.0 41.0 36 36.80019508907169 40.0 35.0 41.0 31.0 41.0 37 36.742952347951565 39.0 35.0 41.0 31.0 41.0 38 36.64444660682669 39.0 35.0 41.0 30.0 41.0 39 36.59096561970447 39.0 35.0 41.0 30.0 41.0 40 36.471467629928846 39.0 35.0 41.0 30.0 41.0 41 36.35117456911897 39.0 35.0 41.0 30.0 41.0 42 36.27912926668344 39.0 35.0 41.0 30.0 41.0 43 36.17882215566304 39.0 35.0 40.0 29.0 41.0 44 36.066766980106614 39.0 35.0 40.0 29.0 41.0 45 35.98235891642498 39.0 35.0 40.0 29.0 41.0 46 35.82835959045535 39.0 35.0 40.0 28.0 41.0 47 35.79946884508219 39.0 35.0 40.0 28.0 41.0 48 35.684271358930665 38.0 35.0 40.0 28.0 41.0 49 35.58986438698837 38.0 35.0 40.0 27.0 41.0 50 35.43746469647273 38.0 34.0 40.0 27.0 41.0 51 33.63700853930024 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 19.0 10 19.0 11 19.0 12 12.0 13 10.0 14 15.0 15 20.0 16 33.0 17 66.0 18 128.0 19 226.0 20 406.0 21 701.0 22 1151.0 23 1829.0 24 2680.0 25 3470.0 26 4271.0 27 4667.0 28 5349.0 29 6273.0 30 7707.0 31 9836.0 32 13355.0 33 19721.0 34 27843.0 35 35789.0 36 46762.0 37 81778.0 38 88471.0 39 58702.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.6717994237515 20.308962230565854 26.402054368618664 12.61718397706398 2 31.987962387206714 24.834696425265694 26.414158435110334 16.76318275241725 3 32.44862891780152 24.04769476866993 27.544108642303478 15.959567671225075 4 28.3322969720847 26.19628523826024 27.136130401143006 18.335287388512054 5 22.72455416688422 37.872437379256 22.81094397478557 16.592064479074207 6 26.836851423770486 35.88428512433961 23.621916429727587 13.656947022162308 7 49.6803102438376 43.339440744661154 4.558249039981392 2.4219999715198433 8 86.54478741936555 4.737911360259739 6.419664598690862 2.2976366216838415 9 79.95566588979128 8.145562079621024 8.195639688047352 3.703132342540335 10 38.948749958466436 35.61704632297447 14.176947212030019 11.257256506529076 11 32.95889838754847 27.112634272070935 24.61207653567377 15.31639080470682 12 31.803078704912352 24.43811024668562 26.14573296055973 17.613078087842297 13 25.814413807179847 25.520593526460438 28.14480260878233 20.520190057577384 14 20.2002629667779 29.43922571947995 29.34405453000622 21.016456783735933 15 20.271226023268287 28.214578992087265 32.75526526892388 18.75892971572057 16 24.202911621327843 26.02920165374775 31.896351217289354 17.871535507635055 17 23.958219610486395 25.06135100368818 28.53426874824966 22.44616063757577 18 24.17182078386884 26.638202332524813 28.313547535754463 20.876429347851886 19 25.709986566859538 27.69481613685664 26.882419674092077 19.712777622191737 20 28.019964589672146 27.002985669734613 26.961452108243584 18.01559763234966 21 26.635116982242625 26.0674125303195 27.801379388910775 19.496091098527103 22 25.19164771945147 25.754605478632765 27.64972255580924 21.404024246106527 23 24.558201573053974 27.21373882747196 28.158568017733643 20.069491581740422 24 23.87966184560907 25.87683281673494 29.672763002378094 20.570742335277895 25 23.55570006597903 27.19498939114172 27.658266602744536 21.59104394013471 26 22.978502228572243 30.004556825032157 26.955756076953385 20.061184869442215 27 22.389437659310875 29.246747328798662 28.36718516373717 19.9966298481533 28 21.180692352603323 30.462375339981868 28.844939788202566 19.51199251921224 29 22.336512035239448 27.658978606655815 29.436377703834854 20.568131654269887 30 23.337826869128932 27.00227366582334 28.98401788553825 20.67588157950948 31 24.036540040726624 28.046308734389314 26.69112795659624 21.22602326828782 32 24.850597845950833 29.324118420490525 26.827358038286825 18.99792569527182 33 24.703450370954037 28.770891381429987 26.621588907928402 19.90406933968757 34 22.742354264666094 29.296350267950803 28.139818581403407 19.821476885979695 35 23.6667726761379 27.185021336383876 27.45795616903922 21.690249818439003 36 22.605174844427147 30.171640409544647 26.527367057003033 20.695817689025173 37 23.874915152867242 30.12559748994888 27.084391450257034 18.915095906926847 38 23.131108400222146 28.78133410546202 26.612807526356015 21.474749967959823 39 23.312669397597226 28.149549301524164 27.02339644852449 21.51438485235412 40 23.658703298476784 27.46792422379707 28.784182121107122 20.089190356619024 41 20.48126717709436 28.446217597888673 28.91875086033806 22.15376436467891 42 22.865056272042455 28.433638862122816 26.788909827077983 21.912395038756745 43 23.18759404384995 28.060786147251903 27.110023591062927 21.641596217835225 44 21.908123015289096 29.983196707693914 27.444665429362093 20.664014847654897 45 22.844882827889666 28.81954498203377 25.689101118795477 22.646471071281084 46 21.54856104009531 30.326145258291287 26.085687297375554 22.039606404237848 47 22.84512016252676 29.127605340978675 27.375363715331343 20.651910781163224 48 22.276941041329454 27.546956657948574 28.528335382322368 21.647766918399604 49 21.599113317795826 27.909366648787458 28.27130197035216 22.22021806306456 50 20.210231021535748 29.905350946727864 27.908654644876187 21.975763386860205 51 20.87144532047296 28.41939878389732 27.63927983177721 23.069876063852508 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 427.0 1 803.0 2 1179.0 3 2415.0 4 3651.0 5 2560.0 6 1469.0 7 1387.5 8 1306.0 9 1326.5 10 1347.0 11 1342.5 12 1338.0 13 1375.0 14 1412.0 15 1360.5 16 1309.0 17 1383.5 18 1458.0 19 1584.5 20 1711.0 21 1823.5 22 1936.0 23 2113.5 24 2291.0 25 2835.5 26 4294.0 27 5208.0 28 6195.0 29 7182.0 30 8331.5 31 9481.0 32 10870.5 33 12260.0 34 13778.0 35 15296.0 36 16962.5 37 18629.0 38 19546.0 39 20463.0 40 21949.0 41 23435.0 42 25391.0 43 27347.0 44 28418.0 45 29489.0 46 29450.5 47 29412.0 48 29010.0 49 28608.0 50 28179.0 51 27750.0 52 26300.5 53 24851.0 54 23145.5 55 21440.0 56 21031.5 57 20623.0 58 20616.5 59 20610.0 60 19786.0 61 18962.0 62 16274.0 63 13586.0 64 11114.0 65 8642.0 66 7021.0 67 5400.0 68 4467.0 69 3534.0 70 2762.0 71 1990.0 72 1590.5 73 1191.0 74 943.0 75 598.0 76 501.0 77 362.0 78 223.0 79 189.0 80 155.0 81 113.5 82 72.0 83 59.0 84 46.0 85 33.5 86 21.0 87 16.5 88 12.0 89 9.0 90 6.0 91 4.0 92 2.0 93 2.5 94 3.0 95 4.0 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 421346.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.64647409139485 #Duplication Level Percentage of deduplicated Percentage of total 1 67.65530016474851 22.087070039740038 2 7.840138538351249 5.119057593304607 3 4.3264486063892935 4.237298770087183 4 3.1395434200367194 4.0998009168415175 5 2.4804559004804076 4.048906964494056 6 2.004013683713559 3.9254388482493283 7 1.6258133532761274 3.715395146062101 8 1.3428687738943905 3.5071944508069115 9 1.168125943142685 3.4321674004464455 >10 8.368718012203326 44.032881382228126 >50 0.0316464388157596 0.688602919124749 >100 0.015455237561184922 0.7210388556501647 >500 7.359636933897582E-4 0.14464025028370514 >1k 7.359636933897582E-4 0.24050646268104459 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1001 0.23757197172869804 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 602 0.14287545152914707 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.7466927418321286E-4 0.0 0.0 0.018986770967328512 0.0 2 4.7466927418321286E-4 0.0 0.0 0.0738110721354896 0.0 3 4.7466927418321286E-4 0.0 0.0 0.09778187048174185 0.0 4 4.7466927418321286E-4 0.0 0.0 0.12104066491671928 0.0 5 4.7466927418321286E-4 0.0 0.0 0.19413973314093405 0.0 6 4.7466927418321286E-4 0.0 0.0 0.2558467387847517 0.0 7 4.7466927418321286E-4 0.0 0.0 0.309959036041638 0.0 8 4.7466927418321286E-4 0.0 0.0 0.4886720177716176 0.0 9 4.7466927418321286E-4 0.0 0.0 0.5468190038590612 0.0 10 4.7466927418321286E-4 0.0 0.0 0.7195986196617506 0.0 11 4.7466927418321286E-4 0.0 0.0 0.9645279651402885 0.0 12 4.7466927418321286E-4 0.0 0.0 1.1721957725954442 0.0 13 4.7466927418321286E-4 0.0 0.0 1.2611962615047965 0.0 14 4.7466927418321286E-4 0.0 0.0 1.2970337917056292 0.0 15 4.7466927418321286E-4 0.0 0.0 1.3722688716636684 0.0 16 4.7466927418321286E-4 0.0 0.0 1.5270110550473956 0.0 17 4.7466927418321286E-4 0.0 0.0 1.7052493675031921 0.0 18 4.7466927418321286E-4 0.0 0.0 1.898914431369943 0.0 19 4.7466927418321286E-4 0.0 0.0 2.019005757738296 0.0 20 4.7466927418321286E-4 0.0 0.0 2.1502518120499543 0.0 21 4.7466927418321286E-4 0.0 0.0 2.3299141323283004 0.0 22 4.7466927418321286E-4 0.0 0.0 2.5209685151870436 0.0 23 4.7466927418321286E-4 0.0 0.0 2.7167695907876186 0.0 24 4.7466927418321286E-4 0.0 0.0 2.884327844574293 0.0 25 4.7466927418321286E-4 0.0 0.0 3.0359846776758292 0.0 26 4.7466927418321286E-4 0.0 0.0 3.175300109648602 0.0 27 4.7466927418321286E-4 0.0 0.0 3.305834160048986 0.0 28 4.7466927418321286E-4 0.0 0.0 3.451794961860324 0.0 29 4.7466927418321286E-4 0.0 0.0 3.6188785463728146 0.0 30 4.7466927418321286E-4 0.0 0.0 3.812306275602474 0.0 31 4.7466927418321286E-4 0.0 0.0 3.9850858914051637 0.0 32 4.7466927418321286E-4 0.0 0.0 4.164748211683509 0.0 33 4.7466927418321286E-4 0.0 0.0 4.334205142566916 0.0 34 4.7466927418321286E-4 0.0 0.0 4.51932615949837 0.0 35 4.7466927418321286E-4 0.0 0.0 4.717975250744044 0.0 36 4.7466927418321286E-4 0.0 0.0 4.926355062110474 0.0 37 4.7466927418321286E-4 0.0 0.0 5.1245294840819655 0.0 38 4.7466927418321286E-4 0.0 0.0 5.32460258315019 0.0 39 4.7466927418321286E-4 0.0 0.0 5.556003854314507 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 25 3.886585E-5 45.0 25 ACCGACC 20 7.028195E-4 45.0 32 TTCCGCA 20 7.028195E-4 45.0 14 CGCGAAG 20 7.028195E-4 45.0 2 TATGACG 20 7.028195E-4 45.0 1 GGCGCGA 20 7.028195E-4 45.0 9 CGGTCAA 20 7.028195E-4 45.0 44 CGCAAAA 20 7.028195E-4 45.0 45 CCGCAAA 20 7.028195E-4 45.0 44 AGGCGAT 255 0.0 43.235294 7 AAGGCGA 150 0.0 42.000004 6 CGTTTTA 270 0.0 41.666664 1 TACGAAT 55 6.002665E-11 40.909092 12 TTACGGG 105 0.0 40.714287 3 CTCGTAC 45 1.9233994E-8 40.0 29 TACGGGA 135 0.0 40.0 4 CCGATTA 35 6.2388717E-6 38.571426 11 TTAACGG 35 6.2388717E-6 38.571426 2 ATAGGAT 185 0.0 37.702705 5 CTCACGA 30 1.13869464E-4 37.500004 24 >>END_MODULE