##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934600.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 946277 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.960683816683698 33.0 31.0 34.0 30.0 34.0 2 32.15819152320093 33.0 31.0 34.0 30.0 34.0 3 31.91406427504843 33.0 31.0 34.0 30.0 34.0 4 35.73253920363699 37.0 35.0 37.0 35.0 37.0 5 32.04883665142448 37.0 35.0 37.0 0.0 37.0 6 33.94055546103308 37.0 35.0 37.0 19.0 37.0 7 20.882474159257807 32.0 0.0 37.0 0.0 37.0 8 28.166101469231524 35.0 17.0 37.0 17.0 37.0 9 34.86628651018676 37.0 32.0 39.0 32.0 39.0 10 36.21626859788413 37.0 35.0 39.0 32.0 39.0 11 36.699668278950035 38.0 35.0 39.0 33.0 39.0 12 37.05338817280775 39.0 37.0 39.0 34.0 39.0 13 36.878518657856 39.0 37.0 39.0 33.0 39.0 14 38.20877713396817 40.0 38.0 41.0 34.0 41.0 15 38.371468396674544 40.0 38.0 41.0 34.0 41.0 16 38.46129621664692 40.0 38.0 41.0 34.0 41.0 17 38.44056867069579 40.0 38.0 41.0 34.0 41.0 18 38.32142702401094 40.0 38.0 41.0 34.0 41.0 19 38.252023456133884 40.0 37.0 41.0 34.0 41.0 20 38.20353976689701 40.0 37.0 41.0 34.0 41.0 21 38.11326704548457 40.0 37.0 41.0 34.0 41.0 22 38.10510030361089 40.0 37.0 41.0 34.0 41.0 23 38.029345529902976 40.0 37.0 41.0 34.0 41.0 24 37.910115114284714 40.0 36.0 41.0 33.0 41.0 25 37.7657472389163 40.0 36.0 41.0 33.0 41.0 26 37.651898968272505 40.0 36.0 41.0 33.0 41.0 27 37.61715015793473 40.0 36.0 41.0 33.0 41.0 28 37.530196760567996 40.0 36.0 41.0 33.0 41.0 29 37.50185727857699 40.0 36.0 41.0 33.0 41.0 30 37.33585197568999 40.0 36.0 41.0 33.0 41.0 31 37.20772458804346 40.0 35.0 41.0 32.0 41.0 32 37.07349433622502 39.0 35.0 41.0 31.0 41.0 33 36.88741668665729 39.0 35.0 41.0 31.0 41.0 34 36.64464633505834 39.0 35.0 41.0 30.0 41.0 35 36.47935541073068 39.0 35.0 41.0 30.0 41.0 36 36.314929983503774 39.0 35.0 41.0 30.0 41.0 37 36.20740438581937 39.0 35.0 41.0 29.0 41.0 38 36.069740678469415 39.0 35.0 41.0 28.0 41.0 39 35.975265170769234 39.0 35.0 41.0 28.0 41.0 40 35.9024186364035 39.0 35.0 41.0 27.0 41.0 41 35.76845574815831 39.0 35.0 40.0 27.0 41.0 42 35.66199326412879 39.0 35.0 40.0 26.0 41.0 43 35.554293298896624 39.0 35.0 40.0 26.0 41.0 44 35.41235494469378 39.0 35.0 40.0 25.0 41.0 45 35.319462482972746 38.0 34.0 40.0 25.0 41.0 46 35.19687364270715 38.0 34.0 40.0 24.0 41.0 47 35.15775718949103 38.0 34.0 40.0 24.0 41.0 48 35.0258645195857 38.0 34.0 40.0 23.0 41.0 49 34.902241098536685 38.0 34.0 40.0 24.0 41.0 50 34.74139601829063 38.0 34.0 40.0 23.0 41.0 51 32.96854515115553 36.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 32.0 9 56.0 10 55.0 11 43.0 12 25.0 13 26.0 14 44.0 15 54.0 16 108.0 17 202.0 18 370.0 19 660.0 20 1166.0 21 2023.0 22 3288.0 23 5228.0 24 8014.0 25 10919.0 26 13278.0 27 13906.0 28 14535.0 29 16280.0 30 18751.0 31 23671.0 32 31087.0 33 44726.0 34 61531.0 35 78689.0 36 106485.0 37 180097.0 38 186818.0 39 124093.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.54111322583134 20.102147679802005 24.28083954275545 14.07589955161121 2 35.21262801484132 22.98724369291444 25.186388340834657 16.613739951409574 3 31.880939724837443 22.872055434085368 28.94448454310947 16.30252029796772 4 27.58494605702136 25.15130347667755 28.730382329909744 18.533368136391353 5 22.25954979355939 37.0118897532118 24.048666510968776 16.679893942260033 6 26.09320526653401 34.047218731935786 26.820687811285705 13.038888190244505 7 48.3224256745118 42.73759163543021 6.3997117123210225 2.540270977736963 8 83.4055989947975 4.592524176324692 9.211150646163862 2.790726182713941 9 77.20234138629598 7.313926049137831 11.229481430912935 4.254251133653254 10 37.63232119136363 29.91122049886027 19.285367815132357 13.171090494643744 11 30.36087741750037 26.660058312735064 26.38455758726039 16.59450668250417 12 26.531132004687848 24.298487652135687 30.15343287430636 19.01694746887011 13 24.384720330304972 25.284985263300282 31.651937012101104 18.678357394293638 14 20.740121550032388 26.612820558884977 32.604829241332084 20.042228649750548 15 20.78577414435731 26.198671213608698 33.81853305110449 19.197021590929506 16 24.858788705632705 25.80407216914286 31.144157577538078 18.192981547686355 17 25.431771035331092 25.32080986856914 29.740234624745188 19.507184471354584 18 25.46537641726471 24.413464556361404 30.80852646740859 19.31263255896529 19 24.738422259021405 26.74882724614463 28.913098384511088 19.599652110322875 20 25.455442750906975 26.792471971737662 29.658123361341342 18.09396191601402 21 24.63908559544404 26.151750491663645 31.013963141870722 18.195200771021593 22 24.448232388613484 23.784156224868617 31.498916279271295 20.26869510724661 23 22.508631193614555 26.2636627541407 31.086986157330255 20.14071989491449 24 21.804926041740423 25.97738294389486 32.07443486420995 20.143256150154766 25 22.486121928357132 26.97127796617692 30.30877850777309 20.233821597692852 26 22.147848885685693 27.18125876461121 29.551706318551545 21.119186031151553 27 21.5729643645571 26.957645594260455 31.102520720676925 20.36686932050552 28 20.255908153743565 26.721245470406657 31.309753909267585 21.713092466582196 29 21.391516437575888 26.943590513137273 30.894970500181234 20.769922549105598 30 21.93226719026247 26.079150185410825 31.596562106021807 20.392020518304893 31 23.281872009992846 26.257744825246732 29.944614526190534 20.515768638569888 32 23.250380174092786 26.5616727448728 29.896425676625345 20.291521404409067 33 22.909148166974365 26.62021797000244 29.629273457983235 20.841360405039964 34 20.97472515975766 27.16371633253265 31.61812027556413 20.243438232145554 35 21.786326836645085 27.755192190024697 30.464863882351572 19.993617090978645 36 23.354895025452375 27.727082027778337 28.616884907907515 20.301138038861772 37 22.074508838321126 28.316655693840175 29.303258982306453 20.30557648553225 38 22.50683467948603 28.639816882371655 28.961709943282994 19.89163849485933 39 21.874673060847933 27.519320452679292 29.397417458101593 21.208589028371186 40 23.31632281033989 26.81329040016824 29.216709272232126 20.653677517259744 41 21.514841848634173 26.894344890555306 29.32006167327326 22.270751587537266 42 22.42662560751239 26.80779518048098 29.09348953847552 21.67208967353111 43 22.298122008671882 26.884833933404277 29.445500630365107 21.371543427558738 44 22.26134630768792 27.16984561602998 29.407985188269397 21.160822888012706 45 22.10135087294735 27.000339224138386 28.79009000535784 22.108219897556424 46 21.36076434278758 27.580296255747523 28.89629569354428 22.16264370792062 47 21.426495624431325 27.705840890141047 29.651571368637303 21.21609211679033 48 21.63489126334044 27.316842742664143 29.95254032381639 21.09572567017903 49 22.559567653023375 27.174812449208847 29.230870030656988 21.034749867110794 50 20.965214202606635 28.449386384747804 29.36708807251999 21.218311340125563 51 21.63045281666996 27.01249211383136 29.06918375908957 22.28787131040911 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 461.0 1 1165.0 2 1869.0 3 8625.0 4 15381.0 5 10492.0 6 5603.0 7 5018.0 8 4433.0 9 4329.0 10 4225.0 11 4151.0 12 4077.0 13 4072.0 14 4067.0 15 3944.0 16 3821.0 17 3771.0 18 3721.0 19 3858.0 20 3995.0 21 4303.0 22 4611.0 23 5295.0 24 5979.0 25 7445.0 26 10245.0 27 11579.0 28 13564.5 29 15550.0 30 17955.5 31 20361.0 32 23113.0 33 25865.0 34 29538.5 35 33212.0 36 36861.5 37 40511.0 38 44279.0 39 48047.0 40 50823.5 41 53600.0 42 56047.0 43 58494.0 44 60532.5 45 62571.0 46 65483.0 47 68395.0 48 68816.0 49 69237.0 50 67435.0 51 65633.0 52 62307.5 53 58982.0 54 55371.0 55 51760.0 56 48711.0 57 45662.0 58 42244.0 59 38826.0 60 35146.5 61 31467.0 62 28132.5 63 24798.0 64 21285.5 65 17773.0 66 15088.0 67 12403.0 68 10311.5 69 8220.0 70 6593.0 71 4966.0 72 4079.0 73 3192.0 74 2529.5 75 1404.0 76 941.0 77 744.0 78 547.0 79 399.5 80 252.0 81 194.5 82 137.0 83 120.0 84 103.0 85 89.0 86 75.0 87 59.0 88 43.0 89 36.5 90 30.0 91 20.0 92 10.0 93 7.0 94 4.0 95 3.5 96 3.0 97 3.5 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 946277.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.73837142337432 #Duplication Level Percentage of deduplicated Percentage of total 1 73.48105882515713 25.52612314051126 2 6.968474460055145 4.8414690809538685 3 3.2086605099208376 3.3439092169543114 4 2.1265239145856363 2.9548791034225506 5 1.6256918870575603 2.8236944296285915 6 1.3613994745471423 2.8375680361443156 7 1.1530882218068819 2.803948485313199 8 1.0546303841646532 2.9308913599590136 9 0.9277403891591006 2.9005371200767205 >10 8.051024845782177 46.73889578386089 >50 0.02902814932444709 0.6575400189118861 >100 0.011677969615139708 0.609669536501512 >500 3.3365627471681954E-4 0.06629866442543514 >1k 3.3365627471681954E-4 0.3495747760613852 >5k 3.3365627471681954E-4 0.6150012472751029 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5306 0.5607237627037326 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3016 0.3187227418609984 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018493527793658728 0.0 2 0.0 0.0 0.0 0.07756713943168861 0.0 3 0.0 0.0 0.0 0.10451485135959132 0.0 4 0.0 0.0 0.0 0.13452720503615748 0.0 5 0.0 0.0 0.0 0.23238438639003167 0.0 6 0.0 0.0 0.0 0.35623818395670614 0.0 7 0.0 0.0 0.0 0.47121508818242436 0.0 8 0.0 0.0 0.0 0.733083441740632 0.0 9 0.0 0.0 0.0 0.868984451698604 0.0 10 0.0 0.0 0.0 1.1099286995245579 0.0 11 0.0 0.0 0.0 1.400752633742551 0.0 12 0.0 0.0 0.0 1.6183421978976558 0.0 13 0.0 0.0 0.0 1.7258160137042324 0.0 14 0.0 0.0 0.0 1.7791830510516478 0.0 15 0.0 0.0 0.0 1.8615056690588485 0.0 16 0.0 0.0 0.0 2.0293212241235916 0.0 17 0.0 0.0 0.0 2.220808494764218 0.0 18 0.0 0.0 0.0 2.442942182891479 0.0 19 0.0 0.0 0.0 2.582964607614895 0.0 20 0.0 0.0 0.0 2.731652571075911 0.0 21 0.0 0.0 0.0 2.932545121565884 0.0 22 0.0 0.0 0.0 3.1373477322179446 0.0 23 0.0 0.0 0.0 3.3570508424066103 0.0 24 0.0 0.0 0.0 3.5334262589072756 0.0 25 0.0 0.0 0.0 3.7025099415921554 0.0 26 0.0 0.0 0.0 3.8597577664890936 0.0 27 0.0 0.0 0.0 4.040148920453524 0.0 28 0.0 0.0 0.0 4.212085890283712 0.0 29 1.0567730167804988E-4 0.0 0.0 4.411181926645158 0.0 30 1.0567730167804988E-4 0.0 0.0 4.659840617493609 0.0 31 1.0567730167804988E-4 0.0 0.0 4.862846714017143 0.0 32 1.0567730167804988E-4 0.0 0.0 5.0711366756245795 0.0 33 1.0567730167804988E-4 0.0 0.0 5.274882513259859 0.0 34 1.0567730167804988E-4 0.0 0.0 5.488773371856232 0.0 35 1.0567730167804988E-4 0.0 0.0 5.7195725987210935 0.0 36 1.0567730167804988E-4 0.0 0.0 5.9206765038144225 0.0 37 1.0567730167804988E-4 0.0 0.0 6.150524634964181 0.0 38 1.0567730167804988E-4 0.0 0.0 6.3979151981924955 0.0 39 1.0567730167804988E-4 0.0 0.0 6.773915037562997 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGTA 20 7.032654E-4 45.0 41 CGTACCC 25 3.890282E-5 45.0 20 TTTGCGA 25 3.890282E-5 45.0 1 TATCGCG 20 7.032654E-4 45.0 1 CGTTTTA 1275 0.0 43.7647 1 CGTTATT 525 0.0 42.85714 1 CGTTTTT 2425 0.0 41.288662 1 CGTATAG 45 1.927765E-8 40.0 2 AACGATA 35 6.247119E-6 38.571426 44 TATAGCG 35 6.247119E-6 38.571426 1 ATGCGCG 30 1.1397693E-4 37.500004 1 CGCTTAG 30 1.1397693E-4 37.500004 2 TAGTACG 30 1.1397693E-4 37.500004 1 TAACGGG 225 0.0 37.0 3 CGTTAAG 55 2.748493E-9 36.818184 2 CGCACGG 110 0.0 36.818184 2 ACGGGAT 365 0.0 36.369865 5 AGTACGG 75 1.8189894E-12 36.000004 2 CGTGAAT 25 0.002106921 36.0 27 GGCGTAA 25 0.002106921 36.0 1 >>END_MODULE