SRR2934599.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934599.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	444391
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1092	0.24572954897826463	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	556	0.12511504508417137	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAT	20	7.02861E-4	45.000004	6
ACACGAA	20	7.02861E-4	45.000004	15
CGGCCTA	20	7.02861E-4	45.000004	45
TCGATGG	20	7.02861E-4	45.000004	2
ACGGATT	20	7.02861E-4	45.000004	26
CCACACG	20	7.02861E-4	45.000004	13
TCGTACG	50	2.1827873E-11	45.0	30
ACGGGTA	30	2.1624855E-6	44.999996	5
CGTTTTA	230	0.0	41.08696	1
TAGGACC	100	0.0	40.5	6
CGAATAT	40	3.4518416E-7	39.375004	14
CGTAAAG	40	3.4518416E-7	39.375004	2
AGGATAC	40	3.4518416E-7	39.375004	7
TCACGAC	75	0.0	39.000004	25
TATGCGG	35	6.239643E-6	38.571426	2
CTAGCGA	35	6.239643E-6	38.571426	1
CATACGA	100	0.0	38.25	18
TAAGGAT	295	0.0	38.135593	5
TACGGGA	160	0.0	37.968754	4
TTAGGAT	155	0.0	37.741936	5