##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934597.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 834419 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.834240351669845 31.0 31.0 34.0 30.0 34.0 2 32.0315285246381 33.0 31.0 34.0 30.0 34.0 3 31.787100964862976 33.0 31.0 34.0 30.0 34.0 4 35.63167665165822 37.0 35.0 37.0 33.0 37.0 5 31.942660701637905 37.0 35.0 37.0 0.0 37.0 6 33.860238081827 37.0 35.0 37.0 19.0 37.0 7 20.8770917249008 32.0 0.0 37.0 0.0 37.0 8 28.15296152172949 35.0 17.0 37.0 17.0 37.0 9 34.79180843197482 37.0 32.0 39.0 32.0 39.0 10 36.09311988341589 37.0 35.0 39.0 32.0 39.0 11 36.579048415723996 38.0 35.0 39.0 32.0 39.0 12 36.981633927319486 39.0 37.0 39.0 33.0 39.0 13 36.81828194228559 39.0 37.0 39.0 33.0 39.0 14 38.15268468239577 40.0 37.0 41.0 33.0 41.0 15 38.32860109848889 40.0 38.0 41.0 34.0 41.0 16 38.37239084920166 40.0 38.0 41.0 34.0 41.0 17 38.36860857674621 40.0 38.0 41.0 34.0 41.0 18 38.2500314590152 40.0 37.0 41.0 34.0 41.0 19 38.18203444552437 40.0 37.0 41.0 34.0 41.0 20 38.137675436441405 40.0 37.0 41.0 34.0 41.0 21 38.05877263101631 40.0 37.0 41.0 34.0 41.0 22 38.02698644206328 40.0 37.0 41.0 34.0 41.0 23 37.951120480238345 40.0 36.0 41.0 33.0 41.0 24 37.83813407892198 40.0 36.0 41.0 33.0 41.0 25 37.69383966568355 40.0 36.0 41.0 33.0 41.0 26 37.55905845864008 39.0 36.0 41.0 33.0 41.0 27 37.529820150308176 39.0 36.0 41.0 33.0 41.0 28 37.443723117522495 39.0 36.0 41.0 33.0 41.0 29 37.4340397330358 39.0 36.0 41.0 33.0 41.0 30 37.27772737677354 39.0 36.0 41.0 32.0 41.0 31 37.15329708455824 39.0 35.0 41.0 32.0 41.0 32 37.03115581021046 39.0 35.0 41.0 31.0 41.0 33 36.85741456031083 39.0 35.0 41.0 31.0 41.0 34 36.65317184771679 39.0 35.0 41.0 30.0 41.0 35 36.47282839916157 39.0 35.0 41.0 30.0 41.0 36 36.291329655724525 39.0 35.0 41.0 30.0 41.0 37 36.20748448920746 39.0 35.0 41.0 29.0 41.0 38 36.07947565911131 39.0 35.0 41.0 29.0 41.0 39 36.00417655877922 39.0 35.0 41.0 28.0 41.0 40 35.906590094424985 39.0 35.0 40.0 27.0 41.0 41 35.79523716502141 39.0 35.0 40.0 27.0 41.0 42 35.685003577339444 39.0 35.0 40.0 26.0 41.0 43 35.623808901762786 39.0 35.0 40.0 26.0 41.0 44 35.5074369111921 39.0 35.0 40.0 26.0 41.0 45 35.42219076986502 39.0 35.0 40.0 25.0 41.0 46 35.30333441592293 38.0 34.0 40.0 24.0 41.0 47 35.2450579385177 38.0 34.0 40.0 24.0 41.0 48 35.09763320346253 38.0 34.0 40.0 24.0 41.0 49 34.97676227410929 38.0 34.0 40.0 24.0 41.0 50 34.78884589157246 38.0 34.0 40.0 23.0 41.0 51 32.84710439239758 36.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 19.0 9 46.0 10 43.0 11 31.0 12 15.0 13 21.0 14 22.0 15 49.0 16 97.0 17 135.0 18 297.0 19 547.0 20 960.0 21 1704.0 22 2993.0 23 4581.0 24 6889.0 25 9459.0 26 11526.0 27 12415.0 28 12977.0 29 14529.0 30 17169.0 31 22165.0 32 28880.0 33 40425.0 34 55542.0 35 70312.0 36 94228.0 37 157937.0 38 161543.0 39 106849.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.39375781232211 20.893819531913824 25.110765694453267 14.601656961310805 2 33.86200458043261 23.005708163404716 26.35474503816428 16.77754221799839 3 30.254824015272902 23.23377104308507 30.44801232953708 16.06339261210495 4 27.03521851731564 25.100938497325686 29.59508352518339 18.268759460175282 5 21.646558863113135 36.785236194286085 25.030829834891104 16.537375107709675 6 25.531297825193338 33.57689601986532 27.24123012539264 13.650576029548702 7 48.013767663488004 42.45972347226034 6.711855794271224 2.8146530699804293 8 82.86879852927605 4.284298416023605 9.593980961603224 3.252922093097113 9 76.63619836077558 7.387175987123975 11.621619354305212 4.355006297795232 10 36.85570438832289 30.171772215158093 19.795810018707627 13.176713377811385 11 29.076638954769724 25.47952527447242 27.381207762526984 18.062628008230877 12 25.97244310112785 23.536376808294154 31.202549318747536 19.28863077183046 13 23.57376809492593 24.025100099590254 32.90349332889112 19.497638476592698 14 20.36446916956589 26.456852013197206 32.49051136179785 20.688167455439054 15 19.881857915507677 26.45577341839052 34.55122666190487 19.11114200419693 16 22.37269285574753 25.65293935061402 32.84812546214791 19.126242331490534 17 22.937037627379052 25.66851905337726 30.792563448339504 20.601879870904185 18 22.870164749364527 24.950534443726713 31.957206151825403 20.22209465508336 19 23.18679224706053 26.67628613442407 29.96168591558917 20.175235702926226 20 24.05494122257523 26.060528343673862 30.603449825567253 19.28108060818366 21 23.840420699912155 26.342281275953688 30.977961911222057 18.839336112912097 22 22.650371096535434 24.20726277805275 30.925709985031503 22.216656140380312 23 20.958295532580156 26.050820990413687 31.903875630828153 21.087007846178 24 21.11061708805768 25.407618954026695 32.245430652945345 21.236333304970284 25 21.27887787790067 26.535709277952684 30.68590240634501 21.499510437801632 26 20.949786617994075 27.621614560550515 30.256022453946997 21.172576367508412 27 20.68457213941677 26.888289935871544 31.291353624498004 21.135784300213682 28 18.819442030922115 27.05367447289671 32.32860229692756 21.798281199253612 29 20.337624143266154 25.25278067733357 31.964516627737382 22.445078551662895 30 20.612426131236226 25.826233582888214 31.941985980664388 21.61935430521117 31 21.26509583314857 25.768588682664223 31.44763002760004 21.518685456587157 32 21.932626174619703 26.023616432511727 30.49031721473265 21.553440178135926 33 21.575970825208916 25.79830996178179 31.333658509693574 21.29206070331572 34 19.586922157812804 26.103192760471654 32.124987566198755 22.184897515516784 35 20.888186870145574 25.768229151061995 30.85020834856349 22.493375630228936 36 21.66105997106969 26.19966707373634 30.836905679281035 21.30236727591294 37 20.897654535670927 27.137445336215976 31.107153600289543 20.85774652782355 38 21.038710767611953 27.20719446704833 30.153675791179253 21.600418974160462 39 20.617938949137063 26.06400381582874 30.655701751757807 22.662355483276386 40 21.770956797484235 26.023017213174676 30.493912530754937 21.712113458586156 41 20.26811470016862 25.706030183876443 30.406786039148198 23.61906907680674 42 20.719566548700353 25.842292661121093 30.117482943221567 23.320657846956987 43 20.459505356421655 25.843491099795184 30.775665463034755 22.921338080748402 44 20.79315068328981 26.29410404125505 29.723556151046417 23.18918912440872 45 20.771099411686457 26.09756009870341 29.474041219099757 23.65729927051038 46 20.70698294262235 26.797568128242528 29.64937279711991 22.84607613201521 47 20.45770769841051 26.09156790533293 31.25575999587737 22.194964400379185 48 20.064979344909453 25.70447221360012 30.981796914979164 23.24875152651126 49 20.675104473891416 25.261768967389287 30.92906561331897 23.134060945400332 50 19.557440566430053 25.459631192482433 31.50779164903963 23.47513659204788 51 19.95951674158906 25.030829834891104 30.322775488094113 24.686877935425727 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 466.0 1 992.0 2 1518.0 3 7406.0 4 13294.0 5 9233.5 6 5173.0 7 4502.5 8 3832.0 9 3717.5 10 3603.0 11 3477.0 12 3351.0 13 3325.5 14 3300.0 15 3222.0 16 3144.0 17 3147.5 18 3151.0 19 3189.5 20 3228.0 21 3493.0 22 3758.0 23 4063.0 24 4368.0 25 5476.5 26 8075.0 27 9565.0 28 11866.0 29 14167.0 30 16601.0 31 19035.0 32 21288.0 33 23541.0 34 25630.0 35 27719.0 36 30927.5 37 34136.0 38 37542.0 39 40948.0 40 44659.5 41 48371.0 42 52213.5 43 56056.0 44 59057.0 45 62058.0 46 65580.0 47 69102.0 48 69059.0 49 69016.0 50 65670.0 51 62324.0 52 56323.0 53 50322.0 54 45331.0 55 40340.0 56 37960.5 57 35581.0 58 33376.5 59 31172.0 60 28469.0 61 25766.0 62 22781.0 63 19796.0 64 16837.5 65 13879.0 66 11327.5 67 8776.0 68 7195.0 69 5614.0 70 4517.0 71 3420.0 72 2750.0 73 2080.0 74 1696.0 75 998.5 76 685.0 77 527.0 78 369.0 79 286.0 80 203.0 81 165.5 82 128.0 83 100.0 84 72.0 85 50.5 86 29.0 87 23.0 88 17.0 89 19.5 90 22.0 91 18.5 92 15.0 93 12.0 94 9.0 95 5.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 834419.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.58573971322611 #Duplication Level Percentage of deduplicated Percentage of total 1 75.78494307960237 30.757879740103984 2 7.5379697915602435 6.118681598528506 3 3.2060553567644035 3.9036038464750304 4 2.05742424632737 3.340083397644922 5 1.4844592447315086 3.0123938260782612 6 1.2013929345514365 2.9255652561008096 7 1.0310157396545077 2.92911755149 8 0.9200752722474097 2.9873548412807214 9 0.822335432562748 3.0037582640659406 >10 5.917199192866438 38.380230110832045 >50 0.024537900868450938 0.6614797709534004 >100 0.011300340748830632 0.8657674776043949 >500 6.457337570754521E-4 0.19105327415568044 >1k 6.457337570754521E-4 0.9230310446862915 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4531 0.5430125632326205 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2513 0.30116763880017117 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 953 0.11421120564129052 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06100052851145528 0.0 2 0.0 0.0 0.0 0.2579040026653276 0.0 3 0.0 0.0 0.0 0.36025066543307377 0.0 4 0.0 0.0 0.0 0.46259732820081995 0.0 5 0.0 0.0 0.0 0.7723937254544779 0.0 6 0.0 0.0 0.0 1.099807171217338 0.0 7 0.0 0.0 0.0 1.391147612889927 0.0 8 0.0 0.0 0.0 2.0342298054095127 0.0 9 0.0 0.0 0.0 2.2631315921617317 0.0 10 0.0 0.0 0.0 2.796676489868999 0.0 11 0.0 0.0 0.0 3.449945411118395 0.0 12 0.0 0.0 0.0 3.9596413792111638 0.0 13 0.0 0.0 0.0 4.1777572178965245 0.0 14 0.0 0.0 0.0 4.2822610702776425 0.0 15 0.0 0.0 0.0 4.463225310066046 0.0 16 0.0 0.0 0.0 4.829228481134778 0.0 17 0.0 0.0 0.0 5.281998612208016 0.0 18 0.0 0.0 0.0 5.7858222307977165 0.0 19 0.0 0.0 0.0 6.0953789403165555 0.0 20 0.0 0.0 0.0 6.4112873748081 0.0 21 0.0 0.0 0.0 6.816599334387161 0.0 22 0.0 0.0 0.0 7.253669918829749 0.0 23 0.0 0.0 0.0 7.73160726205899 0.0 24 0.0 0.0 0.0 8.091857927492063 0.0 25 0.0 0.0 0.0 8.441921864195326 0.0 26 0.0 0.0 0.0 8.745486380343689 0.0 27 0.0 0.0 0.0 9.053005744116565 0.0 28 0.0 0.0 0.0 9.365318862585823 0.0 29 0.0 0.0 0.0 9.705435758294094 0.0 30 0.0 0.0 0.0 10.092052074557266 0.0 31 1.1984386740953885E-4 0.0 0.0 10.452662271592569 0.0 32 1.1984386740953885E-4 0.0 0.0 10.794097449842345 0.0 33 1.1984386740953885E-4 0.0 0.0 11.147277327098257 0.0 34 1.1984386740953885E-4 0.0 0.0 11.485117189325747 0.0 35 1.1984386740953885E-4 0.0 0.0 11.845847230228458 0.0 36 1.1984386740953885E-4 0.0 0.0 12.189439598091607 0.0 37 1.1984386740953885E-4 0.0 0.0 12.556761051701843 0.0 38 1.1984386740953885E-4 0.0 0.0 12.932112044428518 0.0 39 1.1984386740953885E-4 0.0 0.0 13.355760115721239 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTGCG 20 7.0321735E-4 45.000004 45 TCGACGA 20 7.0321735E-4 45.000004 1 CTAGCGT 20 7.0321735E-4 45.000004 44 CGTTTTA 1175 0.0 42.89362 1 CGTTATT 510 0.0 41.911766 1 CGTTTTT 2025 0.0 41.77778 1 ACGTTAG 60 3.6379788E-12 41.250004 2 TCACGAC 45 1.9272193E-8 40.0 25 GCGACGC 35 6.2462314E-6 38.571426 19 CGTATAG 35 6.2462314E-6 38.571426 2 TCGATAG 35 6.2462314E-6 38.571426 2 AGGCGAT 365 0.0 37.60274 7 CAACCCG 30 1.1396535E-4 37.500004 13 CGAGACA 30 1.1396535E-4 37.500004 22 ACCCGGT 30 1.1396535E-4 37.500004 15 ACGGTTC 30 1.1396535E-4 37.500004 38 TATGCGG 85 0.0 37.058823 2 AATCCGT 25 0.0021067783 36.0 20 CCGTATG 25 0.0021067783 36.0 39 GCCGATC 25 0.0021067783 36.0 16 >>END_MODULE