##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934596.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 592218 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.923416714790836 31.0 31.0 34.0 30.0 34.0 2 32.12284496587405 33.0 31.0 34.0 30.0 34.0 3 32.02282436535195 33.0 31.0 34.0 30.0 34.0 4 35.78379245480549 37.0 35.0 37.0 35.0 37.0 5 32.066428240951815 37.0 35.0 37.0 0.0 37.0 6 33.920927766464374 37.0 35.0 37.0 19.0 37.0 7 20.778660898520478 32.0 0.0 37.0 0.0 37.0 8 28.101396782941418 35.0 17.0 37.0 17.0 37.0 9 34.83505398349932 37.0 32.0 39.0 32.0 39.0 10 36.17353575879152 37.0 35.0 39.0 32.0 39.0 11 36.587378296505676 38.0 35.0 39.0 32.0 39.0 12 36.883946452151065 39.0 35.0 39.0 33.0 39.0 13 36.54885700873665 39.0 35.0 39.0 32.0 39.0 14 37.67938326764806 40.0 37.0 41.0 33.0 41.0 15 37.934716607735666 40.0 37.0 41.0 33.0 41.0 16 38.090868565291835 40.0 37.0 41.0 33.0 41.0 17 38.10536153916294 40.0 37.0 41.0 33.0 41.0 18 38.027763424955 40.0 37.0 41.0 33.0 41.0 19 37.976969629427 40.0 37.0 41.0 33.0 41.0 20 37.946850652969005 40.0 37.0 41.0 33.0 41.0 21 37.864619109854814 40.0 36.0 41.0 33.0 41.0 22 37.89622740274696 40.0 36.0 41.0 33.0 41.0 23 37.88379110395159 40.0 36.0 41.0 33.0 41.0 24 37.7500464356031 40.0 36.0 41.0 33.0 41.0 25 37.62344103016119 39.0 36.0 41.0 33.0 41.0 26 37.488073648555094 39.0 35.0 41.0 33.0 41.0 27 37.44950339233188 39.0 35.0 41.0 33.0 41.0 28 37.362228098436724 39.0 35.0 41.0 33.0 41.0 29 37.32970460202155 39.0 35.0 41.0 32.0 41.0 30 37.135598715337935 39.0 35.0 41.0 32.0 41.0 31 37.00377394810695 39.0 35.0 41.0 31.0 41.0 32 36.919764343535654 39.0 35.0 41.0 31.0 41.0 33 36.8044436339321 39.0 35.0 41.0 31.0 41.0 34 36.62510595760345 39.0 35.0 41.0 30.0 41.0 35 36.466794322361025 39.0 35.0 41.0 30.0 41.0 36 36.32445484601954 39.0 35.0 40.0 30.0 41.0 37 36.22072277438376 39.0 35.0 40.0 30.0 41.0 38 36.02357071213641 39.0 35.0 40.0 29.0 41.0 39 35.86560861034281 39.0 35.0 40.0 28.0 41.0 40 35.74949427406799 39.0 35.0 40.0 27.0 41.0 41 35.602816868112754 39.0 35.0 40.0 27.0 41.0 42 35.52328534424823 38.0 35.0 40.0 26.0 41.0 43 35.45011971942764 38.0 34.0 40.0 26.0 41.0 44 35.31452438122448 38.0 34.0 40.0 26.0 41.0 45 35.223865198288465 38.0 34.0 40.0 26.0 41.0 46 35.144593713801335 38.0 34.0 40.0 25.0 41.0 47 35.0402909063892 38.0 34.0 40.0 24.0 41.0 48 34.88715304161643 38.0 34.0 40.0 24.0 41.0 49 34.80419710309379 38.0 34.0 40.0 24.0 41.0 50 34.62181831690357 37.0 34.0 40.0 24.0 41.0 51 32.69345916537491 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 26.0 9 24.0 10 31.0 11 20.0 12 13.0 13 10.0 14 17.0 15 31.0 16 67.0 17 123.0 18 243.0 19 442.0 20 723.0 21 1271.0 22 1941.0 23 2971.0 24 4327.0 25 5920.0 26 7565.0 27 8623.0 28 9660.0 29 11137.0 30 13564.0 31 17240.0 32 22699.0 33 31949.0 34 42666.0 35 53102.0 36 67797.0 37 110294.0 38 108736.0 39 68977.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.56870611835506 21.431128402041143 26.318348986352998 12.681816493250796 2 30.89217146388661 24.56510946982361 27.29214579766235 17.25057326862743 3 31.64071338594909 23.365382342313133 28.286880844553863 16.70702342718391 4 28.36573694146412 25.36852983192 27.75481326133282 18.510919965283055 5 23.16494939363545 36.14800630848775 23.78380934047935 16.903234957397444 6 26.38150140657663 34.0280099557933 25.541607988950016 14.048880648680045 7 49.89243825753354 42.773607016335205 4.832848714493649 2.5011060116376065 8 86.8636211665299 3.7553738657048585 6.647552083861011 2.733452883904238 9 81.79623044216827 5.707357763526269 8.203060359529768 4.293351434775708 10 43.53819032856144 25.623334650415895 16.132066232367134 14.706408788655528 11 33.32421506945077 25.106970743881472 23.909945324188055 17.658868862479697 12 29.852351667798004 22.998963219625207 27.5417160572627 19.606969055314092 13 26.173132191186355 23.442887585314867 30.525752341198682 19.8582278823001 14 21.9873424988771 24.99113502122529 31.974712014832374 21.04681046506523 15 20.6314228881932 24.456872300402893 34.463322627816105 20.448382183587803 16 26.25215714483518 23.800357300858803 29.757623037462555 20.18986251684346 17 27.543235767909792 22.95354075695099 27.449182564528602 22.05404091061062 18 27.167698381339306 23.751051133197574 28.903039083580705 20.178211401882415 19 26.00005403415634 24.96546879696328 27.404773242285778 21.629703926594598 20 25.745924642614714 27.259049876903436 27.49257874634003 19.50244673414182 21 25.631102060389928 24.49621592048874 30.23987788280667 19.632804136314668 22 24.647173844766623 22.69198166891246 30.751513800661247 21.909330685659672 23 23.583545248540233 24.003660814092108 30.75202037087694 21.660773566490718 24 23.06414192071163 25.084681654390785 30.077775413783435 21.773401011114153 25 24.131316508447902 25.1093347382214 28.26628032244883 22.49306843088187 26 21.756853050734694 26.499532266834176 27.713612217122748 24.030002465308385 27 21.741149374048067 25.576392477094583 30.784103151204455 21.89835499765289 28 20.49616864060194 25.95885298994627 30.03150866741639 23.5134697020354 29 22.1778128999794 26.231387765991578 29.62051136574707 21.97028796828195 30 24.235669972881606 24.914305205177822 29.61071767491025 21.239307147030317 31 24.934061443590032 24.28902870226842 29.110564015278158 21.66634583886339 32 25.6777065202341 24.497904487874397 27.681698293533803 22.1426906983577 33 25.260968089453545 24.66844979382592 28.298700816253476 21.771881300467058 34 23.13489289417073 24.173361836350804 30.27550665464407 22.416238614834402 35 22.65736603750646 26.249455437018128 29.026473359472355 22.066705166003057 36 25.210479924622355 25.68800678128662 27.816783684386493 21.284729609704534 37 22.833990186046353 27.101506539821486 28.402041140255786 21.662462133876375 38 24.05381126544617 26.0655704487199 27.550496607668123 22.33012167816581 39 23.402024254581928 25.243406988642697 27.580046536917145 23.774522219858227 40 25.22044247219774 24.640926145439686 27.638133254983803 22.50049812737877 41 22.069069160342984 24.245632520456994 27.944945948957983 25.740352370242036 42 21.96370255547788 24.495540493534477 29.48255541033876 24.05820154064888 43 21.964715695909277 24.6101942190207 29.689911485297642 23.73517859977238 44 23.184874488786225 24.73768105663793 28.591667257665254 23.485777196910597 45 22.284699215491592 24.6166107750862 27.55269174526948 25.545998264152725 46 22.553350286549886 24.892691542641394 28.351890688901722 24.202067481907 47 21.73422624776687 25.197477955752777 30.026780678736547 23.041515117743806 48 21.466588317139973 26.271913383247387 29.440003512220166 22.821494787392478 49 23.531875086539078 24.16525671289964 29.53118615104573 22.771682049515547 50 22.239276752817375 25.24593983972118 28.82570269731754 23.6890807101439 51 21.876910191855025 26.142400264767367 27.256010455609253 24.724679087768354 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 365.0 1 899.0 2 1433.0 3 3082.0 4 4731.0 5 3279.0 6 1827.0 7 1661.5 8 1496.0 9 1531.0 10 1566.0 11 1538.0 12 1510.0 13 1489.0 14 1468.0 15 1412.0 16 1356.0 17 1474.5 18 1593.0 19 1507.5 20 1422.0 21 1648.0 22 1874.0 23 2292.0 24 2710.0 25 3114.0 26 4413.5 27 5309.0 28 6281.0 29 7253.0 30 8396.5 31 9540.0 32 11409.5 33 13279.0 34 14593.0 35 15907.0 36 17709.5 37 19512.0 38 21909.0 39 24306.0 40 26956.0 41 29606.0 42 31915.5 43 34225.0 44 36417.5 45 38610.0 46 41721.5 47 44833.0 48 46051.5 49 47270.0 50 46540.0 51 45810.0 52 42448.5 53 39087.0 54 37865.0 55 36643.0 56 35953.0 57 35263.0 58 33372.0 59 31481.0 60 28558.5 61 25636.0 62 22743.0 63 19850.0 64 17525.5 65 15201.0 66 12871.5 67 10542.0 68 8550.0 69 6558.0 70 5315.5 71 4073.0 72 3291.0 73 2509.0 74 1990.0 75 1097.5 76 724.0 77 573.5 78 423.0 79 305.5 80 188.0 81 149.5 82 111.0 83 89.5 84 68.0 85 49.5 86 31.0 87 23.0 88 15.0 89 10.5 90 6.0 91 6.5 92 7.0 93 3.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 592218.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.50971833080961 #Duplication Level Percentage of deduplicated Percentage of total 1 74.78583939876552 28.05195770980859 2 7.1613350273082546 5.372393194937868 3 3.159909218922345 3.5558191425811727 4 2.1246964531951673 3.1878706199128373 5 1.500867387640393 2.8148556481144595 6 1.1761234623931736 2.6469635877974693 7 1.026322791434018 2.69479551762262 8 0.9173177921887059 2.7526665603870804 9 0.8736549072842553 2.94934945415058 >10 7.229862014072073 44.00848769727513 >50 0.03147967628299425 0.789860215564721 >100 0.011623265088990089 0.7248257267890333 >500 4.8430271204125364E-4 0.16422116717225219 >1k 4.8430271204125364E-4 0.2859337578862001 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1574 0.26578050650267304 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 904 0.1526464916635428 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.032758207281777994 0.0 2 0.0 0.0 0.0 0.15365963209493802 0.0 3 1.6885673856586596E-4 0.0 0.0 0.2063429345274882 0.0 4 1.6885673856586596E-4 0.0 0.0 0.27743162146371775 0.0 5 1.6885673856586596E-4 0.0 0.0 0.5167016200115498 0.0 6 1.6885673856586596E-4 0.0 0.0 0.6728941031849758 0.0 7 1.6885673856586596E-4 0.0 0.0 0.8528953864961889 0.0 8 1.6885673856586596E-4 0.0 0.0 1.2346804723936118 0.0 9 1.6885673856586596E-4 0.0 0.0 1.378039843436032 0.0 10 1.6885673856586596E-4 0.0 0.0 1.836485888642358 0.0 11 1.6885673856586596E-4 0.0 0.0 2.3536940788696055 0.0 12 1.6885673856586596E-4 0.0 0.0 2.7994758686834915 0.0 13 1.6885673856586596E-4 0.0 0.0 2.966306326386567 0.0 14 1.6885673856586596E-4 0.0 0.0 3.0417852885255092 0.0 15 1.6885673856586596E-4 0.0 0.0 3.1788969602409924 0.0 16 1.6885673856586596E-4 0.0 0.0 3.4456906071750604 1.6885673856586596E-4 17 1.6885673856586596E-4 0.0 0.0 3.768713548051562 1.6885673856586596E-4 18 1.6885673856586596E-4 0.0 0.0 4.132937533138135 1.6885673856586596E-4 19 1.6885673856586596E-4 0.0 0.0 4.37372724233306 1.6885673856586596E-4 20 1.6885673856586596E-4 0.0 0.0 4.635286330371586 1.6885673856586596E-4 21 1.6885673856586596E-4 0.0 0.0 4.9630372599279315 1.6885673856586596E-4 22 1.6885673856586596E-4 0.0 0.0 5.3046344420466784 1.6885673856586596E-4 23 1.6885673856586596E-4 0.0 0.0 5.6337362255115515 1.6885673856586596E-4 24 1.6885673856586596E-4 0.0 0.0 5.8898918979159705 1.6885673856586596E-4 25 1.6885673856586596E-4 0.0 0.0 6.153308410078721 1.6885673856586596E-4 26 1.6885673856586596E-4 0.0 0.0 6.394604689489343 1.6885673856586596E-4 27 1.6885673856586596E-4 0.0 0.0 6.696351681306546 1.6885673856586596E-4 28 1.6885673856586596E-4 0.0 0.0 6.95064992958674 1.6885673856586596E-4 29 1.6885673856586596E-4 0.0 0.0 7.248344359678362 1.6885673856586596E-4 30 1.6885673856586596E-4 0.0 0.0 7.590110398535674 1.6885673856586596E-4 31 1.6885673856586596E-4 0.0 0.0 7.8800374186532665 1.6885673856586596E-4 32 1.6885673856586596E-4 0.0 0.0 8.152065624482876 1.6885673856586596E-4 33 1.6885673856586596E-4 0.0 0.0 8.42679553812954 1.6885673856586596E-4 34 1.6885673856586596E-4 0.0 0.0 8.73884279099926 1.6885673856586596E-4 35 1.6885673856586596E-4 0.0 0.0 9.054267178640298 1.6885673856586596E-4 36 1.6885673856586596E-4 0.0 0.0 9.340648207248007 1.6885673856586596E-4 37 1.6885673856586596E-4 0.0 0.0 9.640537774940984 1.6885673856586596E-4 38 1.6885673856586596E-4 0.0 0.0 10.006956897628914 1.6885673856586596E-4 39 1.6885673856586596E-4 0.0 0.0 10.661276759571644 1.6885673856586596E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGCG 40 6.8048394E-9 45.0 20 CGTATAG 25 3.8885075E-5 45.0 2 GTCGAAC 25 3.8885075E-5 45.0 8 AATAGGT 30 2.1637134E-6 44.999996 4 TAGTGCG 30 2.1637134E-6 44.999996 1 TCGACGG 30 2.1637134E-6 44.999996 2 CGTTTAG 30 2.1637134E-6 44.999996 2 AATAGGC 75 0.0 42.0 4 CGTTTTA 310 0.0 40.645164 1 CGACCCG 40 3.4544428E-7 39.375 32 CACGACG 40 3.4544428E-7 39.375 26 TTTAGCG 35 6.243161E-6 38.571426 1 CGCATAG 30 1.1392537E-4 37.499996 2 CGCGAAG 30 1.1392537E-4 37.499996 2 CGTTATT 120 0.0 37.499996 1 AGGCGAT 225 0.0 37.000004 7 GTTACGG 55 2.744855E-9 36.81818 2 AGCGTCG 25 0.0021062857 36.0 1 TCTTCGT 25 0.0021062857 36.0 38 CCCGTCA 25 0.0021062857 36.0 37 >>END_MODULE