SRR2934595.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934595.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	462846
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1638	0.35389740864131913	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	963	0.20806056442099533	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTAA	20	7.028913E-4	45.000004	22
TACGCGG	20	7.028913E-4	45.000004	2
TGCGAAA	20	7.028913E-4	45.000004	1
GGACGTA	20	7.028913E-4	45.000004	8
TAGGCCG	20	7.028913E-4	45.000004	6
TCACGAC	45	3.8380676E-10	45.0	25
GTTAGCG	25	3.887183E-5	45.0	1
GCCGACC	25	3.887183E-5	45.0	14
GCGTAAA	35	1.209828E-7	45.0	1
CACGACC	30	2.162682E-6	44.999996	27
TAAGGCG	30	2.162682E-6	44.999996	5
CGAAGGA	95	0.0	42.63158	4
CGTTTTA	395	0.0	41.582275	1
AGTACGG	65	0.0	41.53846	2
TTAATCG	55	6.002665E-11	40.909092	20
CTCACGA	50	1.0786607E-9	40.5	24
CGTTGAT	45	1.9239451E-8	40.0	25
ATAGCGG	45	1.9239451E-8	40.0	2
TACGGGT	45	1.9239451E-8	40.0	4
CGGTCTA	45	1.9239451E-8	40.0	31