##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934594.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 989418 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.892824872804013 31.0 31.0 34.0 30.0 34.0 2 32.10137777966441 33.0 31.0 34.0 30.0 34.0 3 31.704038131507613 33.0 31.0 34.0 30.0 34.0 4 35.62685538367 37.0 35.0 37.0 33.0 37.0 5 31.984721321019023 37.0 35.0 37.0 0.0 37.0 6 33.89709303853376 37.0 35.0 37.0 19.0 37.0 7 20.844883557808732 32.0 0.0 37.0 0.0 37.0 8 28.143950281882884 35.0 17.0 37.0 17.0 37.0 9 34.85704929564653 37.0 32.0 39.0 32.0 39.0 10 36.30953550471085 37.0 35.0 39.0 32.0 39.0 11 36.734793585724134 38.0 37.0 39.0 33.0 39.0 12 37.05184360907119 39.0 37.0 39.0 34.0 39.0 13 36.815322745290665 39.0 37.0 39.0 33.0 39.0 14 38.04304247547548 40.0 37.0 41.0 33.0 41.0 15 38.238814131135676 40.0 38.0 41.0 33.0 41.0 16 38.33417221032971 40.0 38.0 41.0 33.0 41.0 17 38.335759001756585 40.0 38.0 41.0 34.0 41.0 18 38.20515393898231 40.0 37.0 41.0 34.0 41.0 19 38.10751674216559 40.0 37.0 41.0 34.0 41.0 20 38.018784780547755 40.0 36.0 41.0 34.0 41.0 21 37.92085953560578 40.0 36.0 41.0 33.0 41.0 22 37.88467866968258 39.0 36.0 41.0 33.0 41.0 23 37.81859032279583 39.0 36.0 41.0 33.0 41.0 24 37.672267939334034 39.0 35.0 41.0 33.0 41.0 25 37.52128119763336 39.0 35.0 41.0 33.0 41.0 26 37.39266012949027 39.0 35.0 41.0 33.0 41.0 27 37.34286418884637 39.0 35.0 41.0 33.0 41.0 28 37.21771283724371 39.0 35.0 41.0 33.0 41.0 29 37.157191399388324 39.0 35.0 41.0 33.0 41.0 30 36.91116191538864 39.0 35.0 41.0 32.0 41.0 31 36.679484302893215 39.0 35.0 41.0 31.0 41.0 32 36.53145384458338 39.0 35.0 41.0 30.0 41.0 33 36.237143452009164 39.0 35.0 41.0 30.0 41.0 34 35.90585374432242 39.0 35.0 40.0 28.0 41.0 35 35.612353929279635 39.0 35.0 40.0 25.0 41.0 36 35.339141798511854 39.0 34.0 40.0 24.0 41.0 37 35.233444307663696 38.0 34.0 40.0 24.0 41.0 38 35.04801610643833 38.0 34.0 40.0 23.0 41.0 39 34.87494971791497 38.0 34.0 40.0 23.0 41.0 40 34.742696211308065 38.0 34.0 40.0 22.0 41.0 41 34.56276619184207 38.0 34.0 40.0 21.0 41.0 42 34.44058426266755 38.0 33.0 40.0 20.0 41.0 43 34.361214370468296 38.0 33.0 40.0 20.0 41.0 44 34.17794299274927 38.0 33.0 40.0 19.0 41.0 45 34.077710330719675 38.0 33.0 40.0 20.0 41.0 46 33.97455372754488 38.0 33.0 40.0 19.0 41.0 47 33.87814957884332 38.0 33.0 40.0 18.0 41.0 48 33.733085510876094 37.0 33.0 40.0 18.0 41.0 49 33.60601889191424 37.0 33.0 40.0 18.0 41.0 50 33.450930749187904 37.0 33.0 40.0 18.0 41.0 51 31.61234483302305 35.0 29.0 39.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 28.0 9 56.0 10 60.0 11 36.0 12 32.0 13 29.0 14 38.0 15 55.0 16 118.0 17 225.0 18 400.0 19 783.0 20 1437.0 21 2577.0 22 4468.0 23 7313.0 24 11289.0 25 16108.0 26 19000.0 27 20225.0 28 20598.0 29 21648.0 30 24166.0 31 28983.0 32 37184.0 33 51800.0 34 67940.0 35 84519.0 36 107670.0 37 175187.0 38 174442.0 39 110984.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.02287607462165 20.544805127863047 24.523103481036326 17.90921531647898 2 36.66711137254426 22.37234414575033 24.827524868154814 16.13301961355059 3 30.505812507959224 22.502622753982646 31.2942558150347 15.697308923023435 4 27.379530188454222 23.622978356973494 31.129209292735734 17.868282161836554 5 21.703466078037795 35.445383043364885 26.577745705050848 16.273405173546468 6 25.60596229298436 32.11898307894136 28.72052054844363 13.55453407963065 7 46.91576259983142 42.398561578625014 8.084853924226161 2.6008218973174126 8 81.65557934058204 3.6828721531243622 11.874253348938467 2.787295157355132 9 75.27566710935115 6.735575863790633 13.630841565445545 4.357915461412669 10 39.209717227703564 28.448239267933268 19.94495754069564 12.39708596366753 11 30.75424138230758 24.085876747744635 28.672310388531443 16.487571481416346 12 28.533339801782464 21.5017313208371 31.522167577303023 18.44276130007742 13 25.00207192511153 21.682039340299045 34.08074241624875 19.235146318340682 14 20.402398177514456 23.28985322684649 35.69360977867797 20.614138816961084 15 20.65577945822696 23.652692795158366 36.50711832612708 19.1844094204876 16 25.208759088676373 23.467634508367546 33.07307932542161 18.25052707753447 17 25.29001898085541 23.213848949584502 31.57846329862606 19.917668770934025 18 25.444048925732098 23.458133973709796 32.246431740679874 18.851385359878233 19 24.262546264571696 25.36511363245868 30.722808762322902 19.64953134064672 20 24.648025404833955 26.332551055266833 30.996707155115434 18.02271638478378 21 24.607597597779705 24.511581556025867 33.00627237426447 17.874548471929963 22 23.8706997446984 22.559221683858592 33.50222049730245 20.067858074140553 23 22.223165537720156 24.054646266795228 33.479176647281534 20.243011548203086 24 22.1631302442446 24.57838850718301 33.18971354877312 20.068767699799274 25 23.176048949988783 24.894533958347232 31.203293249162638 20.726123842501348 26 21.798976772203456 25.53005908524001 30.484688978773377 22.186275163783154 27 21.10705485447 24.262647334089333 33.19971943101904 21.430578380421622 28 20.391785878162718 24.76809599178507 32.62129858159039 22.218819548461823 29 22.025877839295426 24.895847862076494 32.15840019081925 20.919874107808834 30 23.96499760465243 23.429632369736552 32.44988467968038 20.15548534593064 31 23.892935038578234 23.778726483649983 32.152740297831656 20.175598179940128 32 24.364626477383673 23.61883450675043 31.74765367114809 20.268885344717805 33 24.091233432179322 24.203117388201953 31.423018380502477 20.282630799116248 34 21.76501741427789 24.45953075444352 33.30847023199497 20.466981599283617 35 22.079848961712845 26.004580470539246 31.673670784238816 20.241899783509094 36 23.195959644963 26.276558542496698 30.29356652092442 20.23391529161588 37 21.889029712416793 26.662037682758953 30.346526948165486 21.102405656658764 38 22.814624354923804 26.148200255099464 30.395747803254036 20.6414275867227 39 22.31513879876857 25.541378871215198 29.350891129936997 22.792591200079237 40 24.277201344628864 24.483383160605527 29.928503423224562 21.310912071541047 41 21.65838907317231 24.340470862668763 30.596674004313645 23.404466059845284 42 21.13019977400856 24.900901337958274 31.263126403602925 22.705772484430238 43 21.636558057363015 24.419709364495088 31.35712105500405 22.586611523137844 44 22.213260724991866 24.86107994800984 30.684200206586095 22.241459120412202 45 21.9673585885844 24.819237167708692 29.636715725810525 23.57668851789638 46 21.689720623639353 25.309121119688545 30.05332427750455 22.94783397916755 47 21.21388533461085 25.6313307419109 31.345093782405414 21.80969014107283 48 21.413194423388298 25.279810959574217 31.432619984677864 21.87437463235963 49 22.185163399089163 24.495208294168897 31.206931751797523 22.11269655494442 50 20.872573573555364 25.381587963833287 31.26100394373258 22.484834518878774 51 21.333248434938522 24.8901879690889 30.471347802445475 23.305215793527104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 639.0 1 1346.0 2 2053.0 3 14862.0 4 27671.0 5 18295.5 6 8920.0 7 7800.0 8 6680.0 9 6460.0 10 6240.0 11 5974.0 12 5708.0 13 5450.5 14 5193.0 15 4886.5 16 4580.0 17 4514.0 18 4448.0 19 4373.5 20 4299.0 21 4447.0 22 4595.0 23 5185.0 24 5775.0 25 6801.0 26 9342.0 27 10857.0 28 12333.5 29 13810.0 30 15998.5 31 18187.0 32 21032.5 33 23878.0 34 26999.5 35 30121.0 36 32476.5 37 34832.0 38 37313.5 39 39795.0 40 42282.5 41 44770.0 42 47196.5 43 49623.0 44 54282.0 45 58941.0 46 63466.0 47 67991.0 48 69658.5 49 71326.0 50 70349.0 51 69372.0 52 65513.0 53 61654.0 54 59301.0 55 56948.0 56 55172.0 57 53396.0 58 51252.5 59 49109.0 60 45520.5 61 41932.0 62 36845.5 63 31759.0 64 27518.0 65 23277.0 66 19867.0 67 16457.0 68 13672.0 69 10887.0 70 8596.5 71 6306.0 72 5181.0 73 4056.0 74 3269.0 75 1979.5 76 1477.0 77 1110.5 78 744.0 79 558.5 80 373.0 81 291.5 82 210.0 83 156.0 84 102.0 85 80.5 86 59.0 87 42.5 88 26.0 89 27.0 90 28.0 91 14.5 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 989418.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.041282450228046 #Duplication Level Percentage of deduplicated Percentage of total 1 74.21112471103521 28.230863560815887 2 6.954715992144016 5.291326308365369 3 3.221176525159607 3.6761305804692226 4 2.1924255636939853 3.336107204783334 5 1.7772681132946122 3.380477914381212 6 1.43111953323652 3.2664973430333393 7 1.2716448371773355 3.3862500299206095 8 1.1291002461471158 3.4361937102643556 9 1.0152384538934573 3.475887550100445 >10 6.759169203488449 39.18510491143987 >50 0.023064485559119458 0.5799503775452832 >100 0.013098110568451525 0.9482274255698524 >500 2.847415340312935E-4 0.10019538137290983 >1k 0.0 0.0 >5k 5.69483068062587E-4 1.706787701938314 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9929 1.0035192406040723 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5828 0.5890331487803941 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013139037292630617 0.0 2 0.0 0.0 0.0 0.0903561487662444 0.0 3 0.0 0.0 0.0 0.17707379489760647 0.0 4 0.0 0.0 0.0 0.23013529165630703 0.0 5 0.0 0.0 0.0 0.4377320808798708 0.0 6 0.0 0.0 0.0 0.7695433072776117 0.0 7 0.0 0.0 0.0 1.0297973151893336 0.0 8 0.0 0.0 0.0 1.526149716297864 0.0 9 0.0 0.0 0.0 1.8713021190235068 0.0 10 0.0 0.0 0.0 2.370888744696377 0.0 11 0.0 0.0 0.0 2.904030450224273 0.0 12 0.0 0.0 0.0 3.2733384676648294 0.0 13 0.0 0.0 0.0 3.468099428148669 0.0 14 0.0 0.0 0.0 3.623746485307524 0.0 15 0.0 0.0 0.0 3.748870548140422 0.0 16 0.0 0.0 0.0 3.941003701165736 0.0 17 0.0 0.0 0.0 4.152340062541818 0.0 18 0.0 0.0 0.0 4.398646477019824 0.0 19 0.0 0.0 0.0 4.554192464661043 0.0 20 0.0 0.0 0.0 4.74278818456911 0.0 21 0.0 0.0 0.0 4.951496738486666 0.0 22 0.0 0.0 0.0 5.172333634520496 0.0 23 0.0 0.0 0.0 5.396000477048124 0.0 24 0.0 0.0 0.0 5.580250207697858 0.0 25 0.0 0.0 0.0 5.76065929667744 0.0 26 0.0 0.0 0.0 5.955622396196552 0.0 27 0.0 0.0 0.0 6.181714907147434 0.0 28 0.0 0.0 0.0 6.3675817500793395 0.0 29 0.0 0.0 0.0 6.57133789763275 0.0 30 0.0 0.0 0.0 6.8240116917218 0.0 31 0.0 0.0 0.0 7.047476395214156 0.0 32 1.0106951763562014E-4 0.0 0.0 7.300958745444292 0.0 33 1.0106951763562014E-4 0.0 0.0 7.528466229642072 0.0 34 1.0106951763562014E-4 0.0 0.0 7.753143767346056 0.0 35 1.0106951763562014E-4 0.0 0.0 8.001774780729681 0.0 36 1.0106951763562014E-4 0.0 0.0 8.236559270197228 0.0 37 1.0106951763562014E-4 0.0 0.0 8.503584935790535 0.0 38 1.0106951763562014E-4 0.0 0.0 8.80507530689759 0.0 39 1.0106951763562014E-4 0.0 0.0 9.289703643960388 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGACC 20 7.03281E-4 45.0 36 TGCGTTG 25 3.89041E-5 45.0 1 CGTTTTA 2200 0.0 43.05682 1 CGTTATT 850 0.0 42.61765 1 CGTTTTT 3720 0.0 42.15726 1 CGACTAG 45 1.927765E-8 40.0 2 GCTACGA 115 0.0 39.130436 10 AACACGT 95 0.0 37.894737 41 ATAACGG 30 1.1398073E-4 37.499996 2 GTTTTAT 2645 0.0 37.00378 2 GCCGATT 55 2.748493E-9 36.818184 9 AGGCGAT 525 0.0 36.42857 7 GACCGAT 355 0.0 36.126762 9 ACACGAC 100 0.0 36.0 26 TGCTCGA 25 0.002106967 36.0 34 CTCGATC 50 4.877802E-8 36.0 11 CCGCACG 25 0.002106967 36.0 39 GCGTAAA 50 4.877802E-8 36.0 1 CATAGGA 260 0.0 35.480766 4 TTAACGG 70 2.1827873E-11 35.357143 2 >>END_MODULE