##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934590.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 615747 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.888873189800357 31.0 31.0 34.0 30.0 34.0 2 32.08236174922492 33.0 31.0 34.0 30.0 34.0 3 31.674083673976487 33.0 31.0 34.0 30.0 34.0 4 35.604337495757186 37.0 35.0 37.0 33.0 37.0 5 32.00565491995901 37.0 35.0 37.0 0.0 37.0 6 33.90233163945582 37.0 35.0 37.0 19.0 37.0 7 20.856106485293473 32.0 0.0 37.0 0.0 37.0 8 28.15527156445748 35.0 17.0 37.0 17.0 37.0 9 34.89110300171986 37.0 32.0 39.0 32.0 39.0 10 36.302853282273404 37.0 35.0 39.0 32.0 39.0 11 36.74192484900454 38.0 37.0 39.0 33.0 39.0 12 37.088976478975944 39.0 37.0 39.0 34.0 39.0 13 36.923168119373706 39.0 37.0 39.0 33.0 39.0 14 38.282034666835564 40.0 38.0 41.0 34.0 41.0 15 38.45494172119393 40.0 38.0 41.0 34.0 41.0 16 38.51144707160571 40.0 38.0 41.0 34.0 41.0 17 38.474420500627694 40.0 38.0 41.0 34.0 41.0 18 38.328698312781064 40.0 38.0 41.0 34.0 41.0 19 38.22515741042994 40.0 37.0 41.0 34.0 41.0 20 38.14826381614527 40.0 37.0 41.0 34.0 41.0 21 38.037093156767305 40.0 37.0 41.0 33.0 41.0 22 37.995248048305555 40.0 36.0 41.0 34.0 41.0 23 37.90153098594065 40.0 36.0 41.0 33.0 41.0 24 37.75206537750083 40.0 36.0 41.0 33.0 41.0 25 37.61304074563092 39.0 35.0 41.0 33.0 41.0 26 37.48176442597366 39.0 35.0 41.0 33.0 41.0 27 37.424932642789976 39.0 35.0 41.0 33.0 41.0 28 37.33492327205817 39.0 35.0 41.0 33.0 41.0 29 37.29593485636146 39.0 35.0 41.0 33.0 41.0 30 37.124947421587116 39.0 35.0 41.0 32.0 41.0 31 36.9834493712515 39.0 35.0 41.0 32.0 41.0 32 36.799796020118656 39.0 35.0 41.0 31.0 41.0 33 36.55090808400203 39.0 35.0 41.0 30.0 41.0 34 36.234726275564476 39.0 35.0 41.0 29.0 41.0 35 35.95438873433407 39.0 35.0 41.0 27.0 41.0 36 35.708977875653474 39.0 35.0 41.0 26.0 41.0 37 35.580645947117894 39.0 35.0 40.0 25.0 41.0 38 35.41624563335266 39.0 35.0 40.0 24.0 41.0 39 35.29613461372934 39.0 35.0 40.0 24.0 41.0 40 35.18743250068616 39.0 35.0 40.0 23.0 41.0 41 35.034899073807914 38.0 34.0 40.0 23.0 41.0 42 34.92918682510837 38.0 34.0 40.0 23.0 41.0 43 34.8079454711107 38.0 34.0 40.0 22.0 41.0 44 34.67862937212849 38.0 34.0 40.0 22.0 41.0 45 34.560727051857334 38.0 34.0 40.0 22.0 41.0 46 34.44544918611053 38.0 34.0 40.0 21.0 41.0 47 34.38946352966397 38.0 34.0 40.0 20.0 41.0 48 34.28444312355562 38.0 33.0 40.0 20.0 41.0 49 34.172892437965594 38.0 33.0 40.0 20.0 41.0 50 34.00922619192623 37.0 33.0 40.0 20.0 41.0 51 32.320815204946186 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 17.0 9 38.0 10 46.0 11 37.0 12 21.0 13 14.0 14 21.0 15 35.0 16 83.0 17 145.0 18 267.0 19 480.0 20 873.0 21 1479.0 22 2468.0 23 4005.0 24 6409.0 25 9245.0 26 11087.0 27 11436.0 28 11471.0 29 11798.0 30 13181.0 31 16107.0 32 20897.0 33 29682.0 34 40022.0 35 52065.0 36 69555.0 37 115345.0 38 114439.0 39 72975.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.60254292753355 19.609514946885653 24.306898774983882 17.481043350596916 2 36.00082501416978 23.179974892285305 24.335319538706642 16.483880554838272 3 30.258693911622792 22.885373375753353 31.44960511378862 15.406327598835237 4 26.569516376044056 24.495125433010635 31.051227208577547 17.884130982367758 5 21.76007353669608 36.36623483346245 26.369596603799938 15.50409502604154 6 25.230329989427474 33.104018371181674 28.560431475914623 13.105220163476233 7 46.70619588889593 42.70065465199181 8.180795034324163 2.412354424788103 8 81.60786816663337 4.244113247811195 11.800301097691097 2.3477174878643337 9 75.65526100817381 7.121918580196088 13.445782115056994 3.7770382965731057 10 36.61341427566842 32.07145142404267 19.556408719815117 11.758725580473799 11 29.02442074423424 25.907393783485748 29.22547734702727 15.842708125252742 12 26.420429169772653 23.303727017752422 32.61566844824254 17.660175364232387 13 23.893417263908713 23.73101289977864 33.92416041003854 18.451409426274104 14 20.463761902209836 25.385913370264085 33.959564561418894 20.190760166107182 15 20.18085349989525 24.75156192397202 35.558273121915335 19.5093114542174 16 24.004014635881298 25.0565573198083 32.878763518133255 18.06066452617715 17 24.219200418353644 24.470439969662866 31.890208153673505 19.420151458309988 18 24.97941524684651 24.01310928027258 32.53462867054163 18.47284680233927 19 24.422205873516234 25.06760081656914 31.22532468692499 19.284868622989638 20 25.340115339579405 25.447464624269383 31.743719417228178 17.46870061892303 21 24.92354814558577 24.943686286737897 32.28095305377046 17.851812513905873 22 25.19541305113951 22.83616485342194 32.82078516013882 19.147636935299726 23 22.77412638632425 25.28457304704692 32.586922875791515 19.354377690837307 24 21.69494938667992 24.523058983641008 34.01364521467421 19.768346415004864 25 22.2537828036515 25.915838810420517 32.17327896035223 19.657099425575765 26 22.86003829494906 25.739630075339388 31.216392446897835 20.18393918281372 27 21.721096489304863 25.410598833611857 32.6640649487533 20.204239728329977 28 20.554383537394415 26.519495831891994 32.423544085476664 20.502576545236924 29 21.59036097618015 25.802642968621853 32.36930102785722 20.237695027340774 30 21.89454435019578 25.159846495395023 33.084042634393676 19.861566520015526 31 23.777785356648103 25.316241898052283 31.115864145501316 19.790108599798295 32 23.14554516708973 25.411086046704245 31.96426454371682 19.479104242489203 33 23.27611827585031 25.841457611648938 31.076724693745973 19.80569941875478 34 21.769005776723233 26.096757272061417 32.67332199750872 19.460914953706638 35 21.904938229500104 27.122340831542825 31.60535089898936 19.367370039967714 36 22.94530058611735 27.83009905042168 29.655361698879574 19.569238664581395 37 22.413101484863102 27.68767042307961 29.786097212004282 20.11313088005301 38 22.36616662362951 28.29327629692065 29.326330457152043 20.014226622297794 39 22.616918961846345 26.79996816874463 29.80477371387924 20.77833915552979 40 24.227807849652535 26.41831791303896 29.725520384183763 19.628353853124743 41 21.60968709551163 26.560259327288644 30.324630083459603 21.505423493740125 42 22.918666270400017 26.161556613349312 29.67436300948279 21.245414106767875 43 22.541238528161728 26.45810698225083 29.40509657375513 21.595557915832313 44 22.226336466113516 27.012555481390898 29.64707907630894 21.114028976186646 45 22.428042686363067 26.752221285690393 29.344519745934612 21.47521628201193 46 21.80944446339162 27.559208571052725 29.02360872241359 21.60773824314207 47 21.813179763766612 27.218159406379566 30.220366481688092 20.748294348165725 48 21.71979725439182 27.20110694814591 30.563851711823197 20.51524408563907 49 22.575343444629045 26.683199430935105 29.76011251374347 20.98134461069238 50 21.233558588186384 27.539720047357115 30.37140254032906 20.85531882412744 51 21.630799662848542 26.720714839049155 29.53437044760267 22.114115050499635 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 359.0 1 864.5 2 1370.0 3 8840.0 4 16310.0 5 11154.5 6 5999.0 7 5237.0 8 4475.0 9 4347.5 10 4220.0 11 4144.5 12 4069.0 13 3972.0 14 3875.0 15 3643.5 16 3412.0 17 3330.0 18 3248.0 19 3256.0 20 3264.0 21 3299.0 22 3334.0 23 3723.5 24 4113.0 25 4729.0 26 6266.0 27 7187.0 28 8518.0 29 9849.0 30 11750.0 31 13651.0 32 15399.5 33 17148.0 34 19104.5 35 21061.0 36 23015.5 37 24970.0 38 26506.0 39 28042.0 40 29918.0 41 31794.0 42 33404.0 43 35014.0 44 36373.0 45 37732.0 46 38661.0 47 39590.0 48 39548.5 49 39507.0 50 39200.5 51 38894.0 52 37810.5 53 36727.0 54 35152.5 55 33578.0 56 31785.5 57 29993.0 58 28671.0 59 27349.0 60 25087.0 61 22825.0 62 20449.5 63 18074.0 64 15790.5 65 13507.0 66 11710.5 67 9914.0 68 8274.0 69 6634.0 70 5330.0 71 4026.0 72 3179.0 73 2332.0 74 1879.0 75 1064.5 76 703.0 77 539.0 78 375.0 79 297.0 80 219.0 81 153.5 82 88.0 83 71.0 84 54.0 85 45.5 86 37.0 87 29.5 88 22.0 89 19.0 90 16.0 91 13.5 92 11.0 93 7.0 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 615747.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.91018811606584 #Duplication Level Percentage of deduplicated Percentage of total 1 72.37839706623848 28.886354424528854 2 7.696633648265201 6.143481935254126 3 4.011379558307177 4.802847383309416 4 2.79151206141502 4.456390859973607 5 2.061422026749813 4.113587043709337 6 1.7416368799553852 4.170543330533843 7 1.467892108929757 4.100869514103265 8 1.2701164485871719 4.05524691139388 9 1.0066214811444685 3.61570074067337 >10 5.539276939291605 32.49316240246411 >50 0.02587183871812185 0.6706043158161509 >100 0.007391953918236402 0.4672288523647585 >500 4.6199711988977515E-4 0.11413364625642679 >1k 9.239942397795503E-4 0.8238273529462276 >5k 4.6199711988977515E-4 1.086021286672623 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5890 0.9565617047261294 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3239 0.5260277354173062 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1229 0.19959496351585962 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 619 0.10052830139651514 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.872130923902187E-4 0.0 0.0 0.01234273167388554 0.0 2 4.872130923902187E-4 0.0 0.0 0.05148218342923311 0.0 3 4.872130923902187E-4 0.0 0.0 0.08022775588025602 0.0 4 4.872130923902187E-4 0.0 0.0 0.10280196249433615 0.0 5 4.872130923902187E-4 0.0 0.0 0.17637113944525917 0.0 6 4.872130923902187E-4 0.0 0.0 0.2830708066787171 0.0 7 4.872130923902187E-4 0.0 0.0 0.37434205931981807 0.0 8 4.872130923902187E-4 0.0 0.0 0.5844933065041323 0.0 9 4.872130923902187E-4 0.0 0.0 0.6944410610201918 0.0 10 4.872130923902187E-4 0.0 0.0 0.8812060797697756 0.0 11 4.872130923902187E-4 0.0 0.0 1.0791769996443343 0.0 12 4.872130923902187E-4 0.0 0.0 1.2438550248722284 0.0 13 4.872130923902187E-4 0.0 0.0 1.3328526164155083 0.0 14 4.872130923902187E-4 0.0 0.0 1.3861212478501723 0.0 15 4.872130923902187E-4 0.0 0.0 1.4566047418826238 0.0 16 4.872130923902187E-4 0.0 0.0 1.556808234550879 0.0 17 4.872130923902187E-4 0.0 0.0 1.6854324909418965 0.0 18 4.872130923902187E-4 0.0 0.0 1.8257498615502796 0.0 19 4.872130923902187E-4 0.0 0.0 1.9103625352620475 0.0 20 4.872130923902187E-4 0.0 0.0 2.009429197381392 0.0 21 4.872130923902187E-4 0.0 0.0 2.1348053664898083 0.0 22 4.872130923902187E-4 0.0 0.0 2.276584376375362 0.0 23 4.872130923902187E-4 0.0 0.0 2.4268084131956793 0.0 24 4.872130923902187E-4 0.0 0.0 2.5387050200812995 0.0 25 4.872130923902187E-4 0.0 0.0 2.655311353526692 0.0 26 4.872130923902187E-4 0.0 0.0 2.7545404200101666 0.0 27 4.872130923902187E-4 0.0 0.0 2.8927465338848584 0.0 28 4.872130923902187E-4 0.0 0.0 3.0155242331671936 0.0 29 4.872130923902187E-4 0.0 0.0 3.143174063373431 0.0 30 4.872130923902187E-4 0.0 0.0 3.3098009409708857 0.0 31 4.872130923902187E-4 0.0 0.0 3.4470326286607973 0.0 32 4.872130923902187E-4 0.0 0.0 3.6008295614919765 0.0 33 4.872130923902187E-4 0.0 0.0 3.7393604840949286 0.0 34 4.872130923902187E-4 0.0 0.0 3.902252061317392 0.0 35 4.872130923902187E-4 0.0 0.0 4.053612928686619 0.0 36 4.872130923902187E-4 0.0 0.0 4.205948222240628 0.0 37 6.496174565202916E-4 0.0 0.0 4.36591652090875 0.0 38 8.120218206503645E-4 0.0 0.0 4.562588205870268 0.0 39 8.120218206503645E-4 0.0 0.0 4.8336410896033595 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 20 7.030731E-4 45.000004 1 ATCGCTA 20 7.030731E-4 45.000004 1 ATCGTTG 35 1.2107012E-7 45.0 23 CGGTCTA 30 2.1638534E-6 44.999996 31 CGTTTTA 1370 0.0 44.178833 1 CGTTATT 470 0.0 43.085106 1 CGTTTTT 2440 0.0 42.049183 1 GTTTTAT 1540 0.0 40.324677 2 AGGCGAT 415 0.0 40.12048 7 TTGCACG 40 3.4547338E-7 39.375004 1 TATACGG 40 3.4547338E-7 39.375004 2 CGAATAT 110 0.0 38.863636 14 GCTACGA 110 0.0 38.863636 10 ATACGGT 35 6.2435647E-6 38.571426 12 TGCGTAG 35 6.2435647E-6 38.571426 2 GACGTAA 30 1.13930655E-4 37.499996 1 CCCCCGT 30 1.13930655E-4 37.499996 23 TACGAAT 115 0.0 37.173916 12 ACACGCG 695 0.0 36.582733 36 TTACACG 690 0.0 36.52174 34 >>END_MODULE