SRR2934588.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934588.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	622375
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13647	2.1927294637477406	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7763	1.2473187387025508	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1481	0.23795942960433822	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	640	0.10283189395460936	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCTTCG	45	3.8380676E-10	45.000004	23
CTCAACG	20	7.0307904E-4	45.0	29
GCGCGAA	20	7.0307904E-4	45.0	1
CTCGCTA	20	7.0307904E-4	45.0	29
TAGTGCG	20	7.0307904E-4	45.0	1
TCGACGT	20	7.0307904E-4	45.0	26
ACGGGTC	25	3.888738E-5	44.999996	5
GCGCAGT	25	3.888738E-5	44.999996	36
CTAGCGG	30	2.1638916E-6	44.999996	2
TAATCCG	25	3.888738E-5	44.999996	31
CGTTATT	1170	0.0	44.23077	1
CGTTTTA	2495	0.0	44.188377	1
CGGTTTA	215	0.0	43.95349	1
CGTTTTT	5110	0.0	43.458904	1
AGGCGAT	275	0.0	43.363636	7
ATCGTTG	85	0.0	42.35294	23
CGGTTTT	480	0.0	40.781246	1
CGTTGTT	50	1.0804797E-9	40.499996	1
GTTTTAT	2775	0.0	40.216213	2
AATCGTT	90	0.0	40.000004	22