##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934588.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 622375 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.672657160072305 31.0 31.0 34.0 30.0 34.0 2 31.84821209078128 31.0 31.0 34.0 30.0 34.0 3 31.007500301265313 31.0 31.0 34.0 27.0 34.0 4 35.1982679252862 37.0 35.0 37.0 33.0 37.0 5 31.657920064269934 37.0 35.0 37.0 0.0 37.0 6 33.707258485639684 37.0 35.0 37.0 17.0 37.0 7 21.28340791323559 32.0 0.0 37.0 0.0 37.0 8 28.40683832094798 35.0 17.0 37.0 17.0 37.0 9 35.00396384816228 37.0 32.0 39.0 32.0 39.0 10 36.30608716609761 37.0 35.0 39.0 32.0 39.0 11 36.73600321349669 39.0 37.0 39.0 33.0 39.0 12 37.14658043783892 39.0 37.0 39.0 34.0 39.0 13 36.9935119501908 39.0 37.0 39.0 33.0 39.0 14 38.38766177947379 40.0 38.0 41.0 34.0 41.0 15 38.54496404900583 40.0 38.0 41.0 34.0 41.0 16 38.607265716007234 40.0 38.0 41.0 34.0 41.0 17 38.589925687889135 40.0 38.0 41.0 34.0 41.0 18 38.387019080136575 40.0 38.0 41.0 34.0 41.0 19 38.20913597107853 40.0 37.0 41.0 34.0 41.0 20 37.99680899779072 40.0 36.0 41.0 34.0 41.0 21 37.889934525005025 40.0 36.0 41.0 33.0 41.0 22 37.78560674834304 39.0 35.0 41.0 33.0 41.0 23 37.650745932918255 39.0 35.0 41.0 33.0 41.0 24 37.4525133560956 39.0 35.0 41.0 33.0 41.0 25 37.297476601727254 39.0 35.0 41.0 33.0 41.0 26 37.176155854589275 39.0 35.0 41.0 33.0 41.0 27 37.11797228359108 39.0 35.0 41.0 33.0 41.0 28 37.03586583651336 39.0 35.0 41.0 33.0 41.0 29 36.990359509941754 39.0 35.0 41.0 33.0 41.0 30 36.79918537859008 39.0 35.0 41.0 32.0 41.0 31 36.571719622414136 39.0 35.0 40.0 31.0 41.0 32 36.29945772243423 39.0 35.0 40.0 30.0 41.0 33 35.85413456517373 39.0 35.0 40.0 28.0 41.0 34 35.362116087567784 38.0 34.0 40.0 24.0 41.0 35 34.92614420566379 38.0 34.0 40.0 21.0 41.0 36 34.578827877083754 38.0 34.0 40.0 19.0 41.0 37 34.40517212291625 38.0 34.0 40.0 18.0 41.0 38 34.20102349869452 38.0 33.0 40.0 16.0 41.0 39 34.055336412934324 38.0 33.0 40.0 15.0 41.0 40 33.96599638481623 38.0 33.0 40.0 15.0 41.0 41 33.821059650532234 38.0 33.0 40.0 15.0 41.0 42 33.69756818638281 38.0 33.0 40.0 14.0 41.0 43 33.60319903595099 38.0 33.0 40.0 13.0 41.0 44 33.44532797750552 38.0 33.0 40.0 12.0 41.0 45 33.36835669813215 38.0 33.0 40.0 12.0 41.0 46 33.248297248443464 38.0 33.0 40.0 10.0 41.0 47 33.2096276360715 38.0 33.0 40.0 10.0 41.0 48 33.085075718015666 38.0 33.0 40.0 10.0 41.0 49 32.991503514762 37.0 32.0 40.0 10.0 41.0 50 32.82791243221531 37.0 32.0 40.0 10.0 41.0 51 31.329150431813616 35.0 28.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 33.0 10 25.0 11 21.0 12 19.0 13 13.0 14 24.0 15 37.0 16 61.0 17 111.0 18 269.0 19 525.0 20 1051.0 21 1920.0 22 3555.0 23 6148.0 24 10045.0 25 14446.0 26 16982.0 27 16479.0 28 15083.0 29 13983.0 30 14511.0 31 16608.0 32 20717.0 33 29189.0 34 38387.0 35 52150.0 36 62475.0 37 104703.0 38 109770.0 39 73012.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.01895963044788 17.601446073508736 22.52098815023097 23.85860614581241 2 42.21940148624222 20.54822253464551 22.44675637678249 14.785619602329787 3 28.13480618598112 20.91745330387628 36.972564772042574 13.97517573810002 4 23.19052018477606 22.83591082546696 37.71664992970476 16.25691906005222 5 19.108736694115283 34.48596103635268 32.5123920465957 13.892910222936333 6 21.529303072906206 31.217031532436234 35.798513757782686 11.455151636874875 7 43.0308093994778 40.958746736292426 13.746856798553928 2.263587065675839 8 75.02920265113477 3.6307692307692303 19.13573006627837 2.2042980518176343 9 70.44723840128539 6.176983329985941 20.228640289214702 3.1471379795139587 10 32.1261297449287 28.85800361518377 27.585619602329785 11.430247037557741 11 23.409519983932515 24.984454709781083 36.81703153243623 14.788993773850171 12 22.429564169511952 22.249929704759992 39.133159268929504 16.187346856798555 13 20.20341434022896 23.83402289616389 39.359710785298255 16.602851978308898 14 16.743442458324964 25.202490459931713 40.21964249849368 17.834424583249646 15 16.624061056437036 25.50118497690299 41.94175537256477 15.9329985940952 16 19.794978911428 24.74006828680458 40.15649728861217 15.308455513155254 17 19.97718417352882 24.447158063868248 38.4867644105242 17.08889335207873 18 20.172725446876882 24.019280980116488 39.428800964049 16.37919260895762 19 19.68989756979313 26.31146816629845 37.41827676240209 16.580357501506327 20 19.791283390239002 26.253143201446072 38.380076320546294 15.575497087768628 21 19.476521389837316 25.894998995782288 39.572604940751155 15.055874673629244 22 19.386382807792728 24.10765213898373 39.23181361719221 17.27415143603133 23 17.183370154649527 25.63615183771842 39.99084153444466 17.189636473187385 24 17.124081140791322 25.2609760996184 40.70214902590882 16.91279373368146 25 17.400120506125727 27.002851978308897 38.72793733681462 16.869090178750753 26 17.786222132958425 27.082707370958026 37.56384816228158 17.56722233380197 27 16.78473589074111 26.514721831693112 39.60666800562362 17.09387427194216 28 16.223980719019885 26.664149427595902 39.3654950793332 17.746374774051013 29 16.565575416750352 25.613818035750153 39.855874673629245 17.964731873870253 30 17.575256075517174 26.27628037758586 38.57240409720827 17.576059449688692 31 18.011327575818438 26.411889937738504 37.89821249246837 17.678569993974694 32 18.290259088170316 26.00875677846957 37.69270937939345 18.00827475396666 33 18.427314721831692 26.95240008033742 36.65330387628038 17.966981321550513 34 16.80755171721229 27.368065876682063 37.81819642498493 18.006185981120705 35 17.46390841534445 27.580317332797748 36.529102229363325 18.42667202249448 36 18.234022896163886 28.778951596706165 34.786422976501306 18.20060253062864 37 18.080578429403495 29.551797549708773 34.89327174131351 17.474352279574212 38 18.208314922675235 29.48077927294637 34.2936332596907 18.01727254468769 39 18.082988551918056 29.288933520787307 33.675838521791526 18.952239405503114 40 19.552520586463146 28.719019883510743 33.6040168708576 18.12444265916851 41 17.237196224141393 28.84016870857602 34.12299658565977 19.799638481622818 42 18.162201245229966 29.15027113878289 33.484474794135366 19.203052821851777 43 18.698533842136975 28.554167503514762 33.66651938140189 19.080779272946373 44 18.546374774051014 28.61522394055031 32.89254870455915 19.945852580839528 45 18.422333801968264 29.193171319542078 32.2125728057843 20.17192207270536 46 18.237397067684274 29.483189395460936 32.53713597107853 19.74227756577626 47 17.888732677244427 29.514681662984536 33.492508535850575 19.104077123920465 48 17.80052219321149 29.117975497087766 33.623458525808395 19.458043783892347 49 18.40482024502912 28.516087567784698 33.44478811006226 19.63430407712392 50 17.267885117493474 29.283791926089574 33.2376782486443 20.210644707772644 51 16.879052018477605 29.130026109660573 33.42839927696325 20.562522594898574 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 614.0 1 1011.5 2 1409.0 3 18359.0 4 35309.0 5 23814.0 6 12319.0 7 10580.0 8 8841.0 9 8724.0 10 8607.0 11 8486.0 12 8365.0 13 8244.5 14 8124.0 15 7839.5 16 7555.0 17 7192.0 18 6829.0 19 6449.0 20 6069.0 21 6083.5 22 6098.0 23 6217.0 24 6336.0 25 6834.0 26 8622.0 27 9912.0 28 11172.5 29 12433.0 30 13913.0 31 15393.0 32 17416.5 33 19440.0 34 21503.5 35 23567.0 36 24644.0 37 25721.0 38 27872.0 39 30023.0 40 32369.0 41 34715.0 42 36472.5 43 38230.0 44 39478.5 45 40727.0 46 42021.5 47 43316.0 48 42681.0 49 42046.0 50 39790.0 51 37534.0 52 34769.5 53 32005.0 54 29024.0 55 26043.0 56 23589.0 57 21135.0 58 18580.5 59 16026.0 60 13681.5 61 11337.0 62 9674.5 63 8012.0 64 6321.0 65 4630.0 66 3631.5 67 2633.0 68 2099.5 69 1566.0 70 1253.5 71 941.0 72 723.0 73 505.0 74 393.0 75 207.0 76 133.0 77 118.0 78 103.0 79 91.0 80 79.0 81 56.0 82 33.0 83 25.0 84 17.0 85 15.0 86 13.0 87 10.5 88 8.0 89 6.5 90 5.0 91 3.5 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 622375.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.69452155695288 #Duplication Level Percentage of deduplicated Percentage of total 1 77.31722254066923 34.55656269567664 2 8.08863967119955 7.23035760301705 3 3.5427962599375666 4.750307514350148 4 2.0032218409806766 3.5813216702027875 5 1.3961617603831142 3.1200390948218186 6 1.0705032873864586 2.8707379352929796 7 0.8519525192369636 2.665432716557574 8 0.7382333835289374 2.6395990299357086 9 0.6171969753305575 2.4826791166917945 >10 4.335363027670129 30.23535561974654 >50 0.025539783056096308 0.797258293196236 >100 0.011572714181839224 0.8734169704295353 >500 3.9905910971859386E-4 0.11414883828362317 >1k 3.9905910971859386E-4 0.2641475460906967 >5k 3.9905910971859386E-4 1.3845897368683853 >10k+ 3.9905910971859386E-4 2.4340456188384456 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13647 2.1927294637477406 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7763 1.2473187387025508 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1481 0.23795942960433822 No Hit CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 640 0.10283189395460936 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02345852580839526 0.0 2 0.0 0.0 0.0 0.09158465555332396 0.0 3 0.0 0.0 0.0 0.14508937537658165 0.0 4 0.0 0.0 0.0 0.20004016870857602 0.0 5 0.0 0.0 0.0 0.3512351877887126 0.0 6 0.0 0.0 0.0 0.585338421369753 0.0 7 0.0 0.0 0.0 0.7938943562964451 0.0 8 0.0 0.0 0.0 1.2201646917051616 0.0 9 0.0 0.0 0.0 1.4378790921871862 0.0 10 0.0 0.0 0.0 1.756336613777867 0.0 11 0.0 0.0 0.0 2.110785298252661 0.0 12 0.0 0.0 0.0 2.3738100020084354 0.0 13 0.0 0.0 0.0 2.508937537658164 0.0 14 0.0 0.0 0.0 2.582044587266519 0.0 15 0.0 0.0 0.0 2.668648322956417 0.0 16 0.0 0.0 0.0 2.829483832094798 0.0 17 0.0 0.0 0.0 3.0406105643703554 0.0 18 0.0 0.0 0.0 3.2732677244426593 0.0 19 0.0 0.0 0.0 3.4305683872263506 0.0 20 0.0 0.0 0.0 3.599276963245632 0.0 21 0.0 0.0 0.0 3.7964249849367344 0.0 22 0.0 0.0 0.0 4.013818035750151 0.0 23 0.0 0.0 0.0 4.258043783892348 0.0 24 0.0 0.0 0.0 4.440249045993172 0.0 25 0.0 0.0 0.0 4.622936332596907 0.0 26 0.0 0.0 0.0 4.780558345049207 0.0 27 0.0 0.0 0.0 4.982365936935127 0.0 28 0.0 0.0 0.0 5.169391444065074 0.0 29 0.0 0.0 0.0 5.378750753163286 0.0 30 0.0 0.0 0.0 5.644988953605141 0.0 31 1.6067483430407713E-4 0.0 0.0 5.873468567985539 0.0 32 1.6067483430407713E-4 0.0 0.0 6.095681863828078 0.0 33 1.6067483430407713E-4 0.0 0.0 6.312432215304278 0.0 34 1.6067483430407713E-4 0.0 0.0 6.5304679654549105 0.0 35 1.6067483430407713E-4 0.0 0.0 6.799758987748544 0.0 36 1.6067483430407713E-4 0.0 0.0 7.024221731271339 0.0 37 1.6067483430407713E-4 0.0 0.0 7.261699136372766 0.0 38 1.6067483430407713E-4 0.0 0.0 7.535489054026913 0.0 39 1.6067483430407713E-4 0.0 0.0 7.91211086563567 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCTTCG 45 3.8380676E-10 45.000004 23 CTCAACG 20 7.0307904E-4 45.0 29 GCGCGAA 20 7.0307904E-4 45.0 1 CTCGCTA 20 7.0307904E-4 45.0 29 TAGTGCG 20 7.0307904E-4 45.0 1 TCGACGT 20 7.0307904E-4 45.0 26 ACGGGTC 25 3.888738E-5 44.999996 5 GCGCAGT 25 3.888738E-5 44.999996 36 CTAGCGG 30 2.1638916E-6 44.999996 2 TAATCCG 25 3.888738E-5 44.999996 31 CGTTATT 1170 0.0 44.23077 1 CGTTTTA 2495 0.0 44.188377 1 CGGTTTA 215 0.0 43.95349 1 CGTTTTT 5110 0.0 43.458904 1 AGGCGAT 275 0.0 43.363636 7 ATCGTTG 85 0.0 42.35294 23 CGGTTTT 480 0.0 40.781246 1 CGTTGTT 50 1.0804797E-9 40.499996 1 GTTTTAT 2775 0.0 40.216213 2 AATCGTT 90 0.0 40.000004 22 >>END_MODULE