SRR2934587.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934587.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	541545
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5199	0.960031022352713	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2763	0.5102069080131845	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	635	0.11725710698095265	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAA	20	7.0299796E-4	45.0	1
TCGCACA	20	7.0299796E-4	45.0	1
TAGCGAA	20	7.0299796E-4	45.0	1
CGTTCTA	20	7.0299796E-4	45.0	1
CGACAAT	25	3.888063E-5	45.0	20
CATCGAC	25	3.888063E-5	45.0	17
TGTAGCG	20	7.0299796E-4	45.0	1
ACCCGCT	20	7.0299796E-4	45.0	12
TTCATCG	25	3.888063E-5	45.0	15
AAGTGCG	20	7.0299796E-4	45.0	1
CGTTTTA	1305	0.0	44.482758	1
CGTTTTT	2560	0.0	43.945312	1
CGAAGGA	145	0.0	43.44828	4
CGTTATT	575	0.0	43.434784	1
CGGTTTA	100	0.0	42.75	1
CGGTTTT	440	0.0	41.931816	1
AGGCGAT	250	0.0	40.499996	7
CGAATAT	90	0.0	40.0	14
CGTTTAG	45	1.9250365E-8	40.0	2
AGCGACT	80	0.0	39.375	19