##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934587.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 541545 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.57481834381261 31.0 31.0 34.0 30.0 34.0 2 31.763125871349565 31.0 31.0 34.0 30.0 34.0 3 31.257838222123738 31.0 31.0 34.0 28.0 34.0 4 35.27290991515017 37.0 35.0 37.0 33.0 37.0 5 31.685926377309364 35.0 35.0 37.0 0.0 37.0 6 33.685725101330455 37.0 35.0 37.0 17.0 37.0 7 21.227307056661957 32.0 0.0 37.0 0.0 37.0 8 28.372044797754572 35.0 17.0 37.0 17.0 37.0 9 34.890254734140285 37.0 32.0 39.0 32.0 39.0 10 36.084419577320446 37.0 35.0 39.0 32.0 39.0 11 36.473942147005324 38.0 35.0 39.0 32.0 39.0 12 36.9619588399856 39.0 37.0 39.0 33.0 39.0 13 36.8072016175941 39.0 37.0 39.0 33.0 39.0 14 38.19168490153173 40.0 37.0 41.0 33.0 41.0 15 38.345252933735885 40.0 38.0 41.0 34.0 41.0 16 38.373714095781516 40.0 38.0 41.0 34.0 41.0 17 38.33448189901116 40.0 38.0 41.0 34.0 41.0 18 38.19589692453997 40.0 37.0 41.0 34.0 41.0 19 38.08353691752301 40.0 37.0 41.0 34.0 41.0 20 37.9765873565447 40.0 36.0 41.0 34.0 41.0 21 37.873626383772354 39.0 36.0 41.0 33.0 41.0 22 37.830481308109206 39.0 36.0 41.0 33.0 41.0 23 37.742196862679926 39.0 36.0 41.0 33.0 41.0 24 37.602452243119224 39.0 35.0 41.0 33.0 41.0 25 37.45102623050716 39.0 35.0 41.0 33.0 41.0 26 37.32959218532162 39.0 35.0 41.0 33.0 41.0 27 37.29320555078525 39.0 35.0 41.0 33.0 41.0 28 37.22939737233286 39.0 35.0 41.0 33.0 41.0 29 37.233461669852 39.0 35.0 41.0 33.0 41.0 30 37.045937087407324 39.0 35.0 40.0 32.0 41.0 31 36.85074739864646 39.0 35.0 40.0 31.0 41.0 32 36.66942174703856 39.0 35.0 40.0 31.0 41.0 33 36.34981765134938 39.0 35.0 40.0 30.0 41.0 34 36.008789666602034 39.0 35.0 40.0 28.0 41.0 35 35.691772613540884 39.0 35.0 40.0 25.0 41.0 36 35.40123904753991 39.0 35.0 40.0 24.0 41.0 37 35.241160014403235 39.0 35.0 40.0 24.0 41.0 38 35.13027541570876 39.0 35.0 40.0 23.0 41.0 39 35.00475676074934 39.0 35.0 40.0 22.0 41.0 40 34.92821095199845 39.0 34.0 40.0 22.0 41.0 41 34.82777977822711 39.0 34.0 40.0 21.0 41.0 42 34.72667091377448 38.0 34.0 40.0 21.0 41.0 43 34.61713800330536 38.0 34.0 40.0 20.0 41.0 44 34.479928722451504 38.0 34.0 40.0 18.0 41.0 45 34.38861221135824 38.0 34.0 40.0 19.0 41.0 46 34.20198690782853 38.0 33.0 40.0 18.0 41.0 47 34.15703588806101 38.0 33.0 40.0 18.0 41.0 48 34.01934280623032 38.0 33.0 40.0 17.0 41.0 49 33.880748598916064 38.0 33.0 40.0 15.0 41.0 50 33.663852496099125 38.0 33.0 40.0 15.0 41.0 51 31.712600060936765 36.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 19.0 10 19.0 11 19.0 12 12.0 13 5.0 14 5.0 15 12.0 16 23.0 17 62.0 18 153.0 19 351.0 20 647.0 21 1333.0 22 2308.0 23 4183.0 24 6717.0 25 9534.0 26 11441.0 27 11269.0 28 11071.0 29 11267.0 30 12596.0 31 15100.0 32 19351.0 33 26016.0 34 35272.0 35 46458.0 36 60427.0 37 95482.0 38 97447.0 39 62930.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.112973067796766 20.641497936459572 25.95647637777101 17.289052617972654 2 36.53029757453213 22.91185404721676 25.495388194886853 15.062460183364262 3 28.537609986243062 22.260569297103658 34.51919969716275 14.682621019490533 4 23.637001541884793 24.307490605582178 35.04233258547305 17.013175267059985 5 19.877941814622975 35.37434562224746 29.460524979456927 15.28718758367264 6 22.779639734463434 31.95819368658191 32.253644664801634 13.008521914153025 7 47.09562455566943 40.752661367014746 9.731416595112133 2.420297482203695 8 80.96058499293687 3.014338605286726 13.17194323648081 2.8531331652955894 9 75.33759890683139 6.569352500715546 14.793230479461542 3.2998181129915336 10 31.244494917319894 37.39227580348817 21.030200629679896 10.333028649512045 11 21.981368122686018 26.111957455059137 36.30557017422375 15.601104248031097 12 22.038981063438865 22.71722571531452 37.754572565530104 17.489220655716515 13 19.807033579850245 25.49040245962939 38.30115687523659 16.401407085283772 14 17.58912001772706 28.328024448568446 35.897478510557754 18.18537702314674 15 16.155998116500015 27.545448670008955 38.95096437045859 17.347588843032437 16 19.71525911974074 26.567875245824446 36.17335586147043 17.543509772964388 17 19.8513512265832 25.965893877701763 34.68280567635192 19.49994921936312 18 19.66503245344339 25.254226333915003 36.622441348364404 18.458299864277205 19 18.92585103730992 28.504187094331957 33.961166662050246 18.608795206307878 20 19.701963825720853 27.35654470080972 34.97899528201719 17.962496191452235 21 19.26229583875763 27.059801124560284 36.51164723153201 17.16625580515008 22 19.343175544045277 24.361041095384504 35.10308469286947 21.192698667700746 23 16.92860242454459 27.25424479960114 35.49381861156506 20.323334164289207 24 17.20374114801171 26.149442797920763 37.48183438126102 19.16498167280651 25 17.0100361004164 28.720789592739294 34.699609450738166 19.56956485610614 26 17.146682177843022 28.82807522920533 34.66895641174787 19.356286181203778 27 17.57120830217249 27.54009362102872 35.54459924844657 19.344098828352216 28 15.782252629052065 26.718370587855116 37.1134439427933 20.385932840299514 29 16.395682722580766 24.829146239001375 36.724002622127436 22.05116841629043 30 18.181683885918993 26.47628544257633 35.30048287769253 20.041547793812146 31 18.14863030773066 27.598075875504346 34.54634425578668 19.706949560978313 32 18.015308053809008 27.02933274243138 34.419854305736365 20.535504898023248 33 18.156570552770315 26.86960455733134 34.07085283771431 20.90297205218403 34 16.898318699277066 26.73886749946911 34.29798077722073 22.06483302403309 35 16.63093556398822 26.390973972615388 34.291148473349395 22.686941990046996 36 18.951149027319982 26.855939949588674 33.206104755837465 20.986806267253876 37 16.92934105199014 28.09775734241845 34.33251161030016 20.64038999529125 38 17.44785751876575 28.159063420399043 33.00224358086586 21.390835479969347 39 18.276782169533465 28.11566905797302 32.105549861968996 21.501998910524517 40 19.569195542383365 27.166902104164937 32.16297814586046 21.10092420759124 41 17.397261538745624 27.02637823264918 32.373856281564784 23.202503947040412 42 17.76362075173808 26.830457302717225 32.54595647637777 22.85996546916692 43 18.122778347136435 26.815869410667624 32.6722617695667 22.389090472629235 44 18.154354670433666 26.899703625737477 31.533667562252443 23.412274141576418 45 18.63353922573378 26.977628821242927 30.483523991542715 23.905307961480577 46 19.490531719432365 27.682094747435578 30.841388988911355 21.985984544220702 47 17.292561098339014 27.215466858709803 32.854702748617385 22.6372692943338 48 17.67867859549991 25.944289024919442 33.192070834372025 23.184961545208616 49 18.400317609801586 25.346739421470055 33.018308727806556 23.234634240921807 50 17.985762955987035 25.680229713135567 32.647702407002186 23.68630492387521 51 17.917070603550954 25.752799859660787 31.046542761912676 25.283586774875587 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 390.0 1 578.0 2 766.0 3 7421.0 4 14076.0 5 10231.0 6 6386.0 7 5631.0 8 4876.0 9 4712.5 10 4549.0 11 4530.5 12 4512.0 13 4351.0 14 4190.0 15 4042.5 16 3895.0 17 3763.0 18 3631.0 19 3517.5 20 3404.0 21 3518.0 22 3632.0 23 3877.0 24 4122.0 25 4621.5 26 6281.0 27 7441.0 28 8724.0 29 10007.0 30 11441.5 31 12876.0 32 15187.5 33 17499.0 34 19944.0 35 22389.0 36 24132.5 37 25876.0 38 27952.5 39 30029.0 40 32640.0 41 35251.0 42 38231.5 43 41212.0 44 44146.0 45 47080.0 46 50231.5 47 53383.0 48 51913.0 49 50443.0 50 45668.0 51 40893.0 52 34671.0 53 28449.0 54 23725.5 55 19002.0 56 15757.0 57 12512.0 58 10628.0 59 8744.0 60 7377.5 61 6011.0 62 4952.5 63 3894.0 64 3043.0 65 2192.0 66 1714.0 67 1236.0 68 962.5 69 689.0 70 535.5 71 382.0 72 289.5 73 197.0 74 171.5 75 123.5 76 101.0 77 59.5 78 18.0 79 20.0 80 22.0 81 17.5 82 13.0 83 8.0 84 3.0 85 3.0 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 541545.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.26550829815038 #Duplication Level Percentage of deduplicated Percentage of total 1 80.29171930692065 42.76779241015544 2 8.099476863653676 8.628455041832437 3 3.0788929577526845 4.9199639517087705 4 1.7848990804977494 3.8029422713445538 5 1.2365513582556946 3.2932768317128907 6 0.9138137656409621 2.9204852830027628 7 0.7275082879850155 2.712576912544731 8 0.5913525527621826 2.5198955445029156 9 0.49730940042598276 2.3840494195624533 >10 2.746567139449275 22.45597452874847 >50 0.018993623025807753 0.657608239926345 >100 0.011776046251195821 1.1974540175971675 >500 3.798724597159943E-4 0.1284865328107809 >1k 3.798724597159943E-4 0.5590681734743111 >5k 3.798724597159943E-4 1.051970841075984 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5199 0.960031022352713 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2763 0.5102069080131845 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 635 0.11725710698095265 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09103583266395221 0.0 2 0.0 0.0 0.0 0.4138160263689998 0.0 3 0.0 0.0 0.0 0.5637573978155094 0.0 4 0.0 0.0 0.0 0.7238548966383218 0.0 5 0.0 0.0 0.0 1.1862356775521887 0.0 6 0.0 0.0 0.0 1.6395682722580764 0.0 7 0.0 0.0 0.0 2.0637250828647664 0.0 8 0.0 0.0 0.0 3.056809683405811 0.0 9 0.0 0.0 0.0 3.4274160042101762 0.0 10 0.0 0.0 0.0 4.308044576166339 0.0 11 0.0 0.0 0.0 5.4113693229556175 0.0 12 0.0 0.0 0.0 6.27334755191166 0.0 13 0.0 0.0 0.0 6.663896813745857 0.0 14 0.0 0.0 0.0 6.8422753418460145 0.0 15 0.0 0.0 0.0 7.1050420556001805 0.0 16 0.0 0.0 0.0 7.700560433574311 0.0 17 0.0 0.0 0.0 8.489045231698197 0.0 18 0.0 0.0 0.0 9.363580127228577 0.0 19 0.0 0.0 0.0 9.916996740806397 0.0 20 0.0 0.0 0.0 10.437175119334496 0.0 21 0.0 0.0 0.0 11.116343055517085 0.0 22 0.0 0.0 0.0 11.857186383403041 0.0 23 0.0 0.0 0.0 12.680755985190519 0.0 24 0.0 0.0 0.0 13.291231568937024 0.0 25 0.0 0.0 0.0 13.831537545356342 0.0 26 0.0 0.0 0.0 14.333065580884321 0.0 27 0.0 0.0 0.0 14.858414351531268 0.0 28 0.0 0.0 0.0 15.413677533722959 0.0 29 0.0 0.0 0.0 16.014920274400097 0.0 30 0.0 0.0 0.0 16.666389681374586 0.0 31 0.0 0.0 0.0 17.271140902418082 0.0 32 0.0 0.0 0.0 17.855949182431747 0.0 33 1.84656861387327E-4 0.0 0.0 18.408996482286792 0.0 34 1.84656861387327E-4 0.0 0.0 18.943208782280326 0.0 35 1.84656861387327E-4 0.0 0.0 19.52746309170983 0.0 36 1.84656861387327E-4 0.0 0.0 20.104885097268003 0.0 37 3.69313722774654E-4 0.0 0.0 20.691355289034153 0.0 38 3.69313722774654E-4 0.0 0.0 21.243848618305034 0.0 39 3.69313722774654E-4 0.0 0.0 21.823117192477078 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAA 20 7.0299796E-4 45.0 1 TCGCACA 20 7.0299796E-4 45.0 1 TAGCGAA 20 7.0299796E-4 45.0 1 CGTTCTA 20 7.0299796E-4 45.0 1 CGACAAT 25 3.888063E-5 45.0 20 CATCGAC 25 3.888063E-5 45.0 17 TGTAGCG 20 7.0299796E-4 45.0 1 ACCCGCT 20 7.0299796E-4 45.0 12 TTCATCG 25 3.888063E-5 45.0 15 AAGTGCG 20 7.0299796E-4 45.0 1 CGTTTTA 1305 0.0 44.482758 1 CGTTTTT 2560 0.0 43.945312 1 CGAAGGA 145 0.0 43.44828 4 CGTTATT 575 0.0 43.434784 1 CGGTTTA 100 0.0 42.75 1 CGGTTTT 440 0.0 41.931816 1 AGGCGAT 250 0.0 40.499996 7 CGAATAT 90 0.0 40.0 14 CGTTTAG 45 1.9250365E-8 40.0 2 AGCGACT 80 0.0 39.375 19 >>END_MODULE